Regulog XylR - Thermotogales

Properties
Regulator type:	Transcription factor
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose; Glucose
Phylum:	Thermotogae
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By TF family - ROK
By effector - Xylose
By effector - Glucose
By pathway - Xylose utilization

Statistics of regulated genes
Genome	Genes	Operons
Thermotoga maritima MSB8	27	7
Thermotoga sp. RQ2	27	8
Thermotoga neapolitana DSM 4359	26	8
Thermotoga petrophila RKU-1	27	7
Thermotoga naphthophila RKU-10	27	7
Thermotoga lettingae TMO	12	2
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Fervidobacterium nodosum Rt17-B1
Petrotoga mobilis SJ95
Thermotogales bacterium TBF 19.5.1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
xtpN	* Thermotoga maritima MSB8 Site: position = -45 score = 5.38094 sequence = GAAATTTCTTTAGAGGAAAAAAT Gene: TM0309: Predicted xylose oligosaccharide ABC transporter, substrate-binding component	* Thermotoga sp. RQ2 Site: position = -51 score = 5.38094 sequence = GAAATTTCTTTAGAGGAAAAAAT Gene: TRQ2_0622: Predicted xylose oligosaccharide ABC transporter, substrate-binding component	2 Thermotoga neapolitana DSM 4359* Gene: CTN_0378: Predicted xylose oligosaccharide ABC transporter, substrate-binding component Site: position = -65 score = 4.28744 sequence = AaaATTgtTTGgtAgaAAAaAAg Gene: CTN_0379: Predicted xylose oligosaccharide ABC transporter, substrate-binding component	* Thermotoga petrophila RKU-1 Site: position = -51 score = 4.92245 sequence = GAAAGTTCTTTAGAGGAAAAAAT Gene: Tpet_0608: Predicted xylose oligosaccharide ABC transporter, substrate-binding component	* Thermotoga naphthophila RKU-10 Site: position = -13 score = 4.93795 sequence = gaaATTTCTTtAgtgaAAAaAAT Gene: Tnap_0948: Predicted xylose oligosaccharide ABC transporter, substrate-binding component	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted xylose oligosaccharide ABC transporter, substrate-binding component
bgaL	Thermotoga maritima MSB8 Gene: TM0310: Beta-galactosidase (EC 3.2.1.23)	Thermotoga sp. RQ2 Gene: TRQ2_0621: Beta-galactosidase (EC 3.2.1.23)	Thermotoga neapolitana DSM 4359 Gene: CTN_0377: Beta-galactosidase (EC 3.2.1.23)	Thermotoga petrophila RKU-1 Gene: Tpet_0607: Beta-galactosidase (EC 3.2.1.23)	Thermotoga naphthophila RKU-10 Gene: Tnap_0949: Beta-galactosidase (EC 3.2.1.23)	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Beta-galactosidase (EC 3.2.1.23)

CRON 2.
xloE	* Thermotoga maritima MSB8 Site: position = -53 score = 5.82684 sequence = AATATTTCCCGAAAGGAAAAAAT Gene: TM0071: Xylose oligosaccharides ABC transporter, sugar-binding protein	* Thermotoga sp. RQ2 Site: position = -53 score = 5.82684 sequence = AATATTTCCCGAAAGGAAAAAAT Gene: TRQ2_0876: Xylose oligosaccharides ABC transporter, sugar-binding protein	* Thermotoga neapolitana DSM 4359 Site: position = -52 score = 5.82684 sequence = AATATTTCCCGAAAGGAAAAAAT Gene: CTN_0622: Xylose oligosaccharides ABC transporter, sugar-binding protein	* Thermotoga petrophila RKU-1 Site: position = -54 score = 5.37705 sequence = AATATTTCCCGAAAGGAAAAAAA Gene: Tpet_0853: Xylose oligosaccharides ABC transporter, sugar-binding protein	* Thermotoga naphthophila RKU-10 Site: position = -53 score = 5.82684 sequence = AATATTTCCCGAAAGGAAAAAAT Gene: Tnap_0701: Xylose oligosaccharides ABC transporter, sugar-binding protein	* Thermotoga lettingae TMO Site: position = -52 score = 5.24436 sequence = AATTTTTCGAGGAAATAAATAAT Gene: Tlet_0350: Xylose oligosaccharides ABC transporter, sugar-binding protein	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose oligosaccharides ABC transporter, sugar-binding protein
xloF	Thermotoga maritima MSB8 Gene: TM0072: Xylose oligosaccharides ABC transporter, permease protein 1	Thermotoga sp. RQ2 Gene: TRQ2_0875: Xylose oligosaccharides ABC transporter, permease protein 1	Thermotoga neapolitana DSM 4359 Gene: CTN_0621: Xylose oligosaccharides ABC transporter, permease protein 1	Thermotoga petrophila RKU-1 Gene: Tpet_0852: Xylose oligosaccharides ABC transporter, permease protein 1	Thermotoga naphthophila RKU-10 Gene: Tnap_0702: Xylose oligosaccharides ABC transporter, permease protein 1	Thermotoga lettingae TMO Gene: Tlet_0351: Xylose oligosaccharides ABC transporter, permease protein 1	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose oligosaccharides ABC transporter, permease protein 1
xloG	Thermotoga maritima MSB8 Gene: TM0073: Xylose oligosaccharides ABC transporter, permease protein 2	Thermotoga sp. RQ2 Gene: TRQ2_0874: Xylose oligosaccharides ABC transporter, permease protein 2	Thermotoga neapolitana DSM 4359 Gene: CTN_0620: Xylose oligosaccharides ABC transporter, permease protein 2	Thermotoga petrophila RKU-1 Gene: Tpet_0851: Xylose oligosaccharides ABC transporter, permease protein 2	Thermotoga naphthophila RKU-10 Gene: Tnap_0703: Xylose oligosaccharides ABC transporter, permease protein 2	Thermotoga lettingae TMO Gene: Tlet_0352: Xylose oligosaccharides ABC transporter, permease protein 2	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose oligosaccharides ABC transporter, permease protein 2
xloK	Thermotoga maritima MSB8 Gene: TM0074: Xylose oligosaccharides ABC transporter, ATP-binding protein 1	Thermotoga sp. RQ2 Gene: TRQ2_0873: Xylose oligosaccharides ABC transporter, ATP-binding protein 1	Thermotoga neapolitana DSM 4359 Gene: CTN_0619: Xylose oligosaccharides ABC transporter, ATP-binding protein 1	Thermotoga petrophila RKU-1 Gene: Tpet_0850: Xylose oligosaccharides ABC transporter, ATP-binding protein 1	Thermotoga naphthophila RKU-10 Gene: Tnap_0704: Xylose oligosaccharides ABC transporter, ATP-binding protein 1	Thermotoga lettingae TMO Gene: Tlet_0353: Xylose oligosaccharides ABC transporter, ATP-binding protein 1	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose oligosaccharides ABC transporter, ATP-binding protein 1
xloL	Thermotoga maritima MSB8 Gene: TM0075: Xylose oligosaccharides ABC transporter, ATP-binding protein 2	Thermotoga sp. RQ2 Gene: TRQ2_0872: Xylose oligosaccharides ABC transporter, ATP-binding protein 2	Thermotoga neapolitana DSM 4359 Gene: CTN_0618: Xylose oligosaccharides ABC transporter, ATP-binding protein 2	Thermotoga petrophila RKU-1 Gene: Tpet_0849: Xylose oligosaccharides ABC transporter, ATP-binding protein 2	Thermotoga naphthophila RKU-10 Gene: Tnap_0705: Xylose oligosaccharides ABC transporter, ATP-binding protein 2	Thermotoga lettingae TMO Gene: Tlet_0354: Xylose oligosaccharides ABC transporter, ATP-binding protein 2	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose oligosaccharides ABC transporter, ATP-binding protein 2
xyl3	Thermotoga maritima MSB8 Gene: TM0076: Beta-xylosidase (EC 3.2.1.37)	Thermotoga sp. RQ2 Gene: TRQ2_0871: Beta-xylosidase (EC 3.2.1.37)	Thermotoga neapolitana DSM 4359 Gene: CTN_0616: Beta-xylosidase (EC 3.2.1.37)	Thermotoga petrophila RKU-1 Gene: Tpet_0848: Beta-xylosidase (EC 3.2.1.37)	Thermotoga naphthophila RKU-10 Gene: Tnap_0706: Beta-xylosidase (EC 3.2.1.37)	Thermotoga lettingae TMO Gene: Tlet_0355: Beta-xylosidase (EC 3.2.1.37)	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0229: Beta-xylosidase (EC 3.2.1.37)	Thermotogales bacterium TBF 19.5.1	Beta-xylosidase (EC 3.2.1.37)
axeA	Thermotoga maritima MSB8 Gene: TM0077: Acetyl xylan esterase (EC 3.1.1.41)	Thermotoga sp. RQ2 Gene: TRQ2_0870: Acetyl xylan esterase (EC 3.1.1.41)	Thermotoga neapolitana DSM 4359 Gene: CTN_0615: Acetyl xylan esterase (EC 3.1.1.41)	Thermotoga petrophila RKU-1 Gene: Tpet_0847: Acetyl xylan esterase (EC 3.1.1.41)	Thermotoga naphthophila RKU-10 Gene: Tnap_0707: Acetyl xylan esterase (EC 3.1.1.41)	Thermotoga lettingae TMO Gene: Tlet_0356: Acetyl xylan esterase (EC 3.1.1.41)	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Acetyl xylan esterase (EC 3.1.1.41)
xylR	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO Gene: Tlet_0357: Xylose-responsive transcription regulator, ROK family	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose-responsive transcription regulator, ROK family
CTN_0617	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359 Gene: CTN_0617: Endo-1,3-beta-xylanase	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Endo-1,3-beta-xylanase

CRON 3.
xynB	* Thermotoga maritima MSB8 Site: position = -189 score = 5.82684 sequence = ATTTTTTCCTTTCGGGAAATATT Gene: TM0070: Endo-1,4-beta-xylanase B ( EC 3.2.1.8 )	* Thermotoga sp. RQ2 Site: position = -189 score = 5.82684 sequence = ATTTTTTCCTTTCGGGAAATATT Gene: TRQ2_0877: Endo-1,4-beta-xylanase B ( EC 3.2.1.8 )	* Thermotoga neapolitana DSM 4359 Site: position = -190 score = 5.82684 sequence = ATTTTTTCCTTTCGGGAAATATT Gene: CTN_0623: Endo-1,4-beta-xylanase B ( EC 3.2.1.8 )	* Thermotoga petrophila RKU-1 Site: position = -189 score = 5.37705 sequence = TTTTTTTCCTTTCGGGAAATATT Gene: Tpet_0854: Endo-1,4-beta-xylanase B ( EC 3.2.1.8 )	* Thermotoga naphthophila RKU-10 Site: position = -189 score = 5.82684 sequence = ATTTTTTCCTTTCGGGAAATATT Gene: Tnap_0700: Endo-1,4-beta-xylanase B ( EC 3.2.1.8 )	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Endo-1,4-beta-xylanase B ( EC 3.2.1.8 )

CRON 4.
xynA3	Thermotoga maritima MSB8	* Thermotoga sp. RQ2 Site: position = -40 score = 5.24781 sequence = GTTTTTTCCTTTCTGAAAATAAC Gene: TRQ2_1549: Endo-1,4-beta-xylanase C precursor (EC 3.2.1.8)	* Thermotoga neapolitana DSM 4359 Site: position = -41 score = 5.24781 sequence = GTTTTTTCCTTTCTGAAAATAAC Gene: CTN_1302: Endo-1,4-beta-xylanase C precursor (EC 3.2.1.8)	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Endo-1,4-beta-xylanase C precursor (EC 3.2.1.8)

CRON 5.
xylA	* Thermotoga maritima MSB8 Site: position = -38 score = 4.98147 sequence = ATAATTGATTGATAGAAAAAATT Gene: TM1667: Xylose isomerase (EC 5.3.1.5)	* Thermotoga sp. RQ2 Site: position = -38 score = 4.98147 sequence = ATAATTGATTGATAGAAAAAATT Gene: TRQ2_1162: Xylose isomerase (EC 5.3.1.5)	* Thermotoga neapolitana DSM 4359 Site: position = -38 score = 4.98147 sequence = ATAATTGATTGATAGAAAAAATT Gene: CTN_0720: Xylose isomerase (EC 5.3.1.5)	* Thermotoga petrophila RKU-1 Site: position = -38 score = 4.98147 sequence = ATAATTGATTGATAGAAAAAATT Gene: Tpet_1124: Xylose isomerase (EC 5.3.1.5)	* Thermotoga naphthophila RKU-10 Site: position = -38 score = 4.98147 sequence = ATAATTGATTGATAGAAAAAATT Gene: Tnap_1139: Xylose isomerase (EC 5.3.1.5)	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0226: Xylose isomerase (EC 5.3.1.5)	Thermotogales bacterium TBF 19.5.1	Xylose isomerase (EC 5.3.1.5)
TM1668	Thermotoga maritima MSB8 Gene: TM1668: conserved hypothetical protein	Thermotoga sp. RQ2 Gene: TRQ2_1161: conserved hypothetical protein	Thermotoga neapolitana DSM 4359 Gene: CTN_0719: conserved hypothetical protein	Thermotoga petrophila RKU-1 Gene: Tpet_1123: conserved hypothetical protein	Thermotoga naphthophila RKU-10 Gene: Tnap_1138: conserved hypothetical protein	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0461: conserved hypothetical protein	Thermotogales bacterium TBF 19.5.1	conserved hypothetical protein

CRON 6.
xylR	* Thermotoga maritima MSB8 Site: position = -61 score = 5.43417 sequence = ATTATTTCCTGCATATAATTAAT Gene: TM0110: Xylose-responsive transcription regulator, ROK family	* Thermotoga sp. RQ2 Site: position = -61 score = 5.22702 sequence = ATTATTTCCCGCATATAATTAAT Gene: TRQ2_0837: Xylose-responsive transcription regulator, ROK family	* Thermotoga neapolitana DSM 4359 Site: position = -34 score = 5.149 sequence = ATTAATTCCTGCATATAATTAAT Gene: CTN_0581: Xylose-responsive transcription regulator, ROK family	* Thermotoga petrophila RKU-1 Site: position = -61 score = 5.22702 sequence = ATTATTTCCCGCATATAATTAAT Gene: Tpet_0814: Xylose-responsive transcription regulator, ROK family	* Thermotoga naphthophila RKU-10 Site: position = -61 score = 5.22702 sequence = ATTATTTCCCGCATATAATTAAT Gene: Tnap_0740: Xylose-responsive transcription regulator, ROK family	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose-responsive transcription regulator, ROK family
adhB	Thermotoga maritima MSB8 Gene: TM0111: Iron-containing alcohol dehydrogenase	Thermotoga sp. RQ2 Gene: TRQ2_0836: Iron-containing alcohol dehydrogenase	Thermotoga neapolitana DSM 4359 Gene: CTN_0580: Iron-containing alcohol dehydrogenase	Thermotoga petrophila RKU-1 Gene: Tpet_0813: Iron-containing alcohol dehydrogenase	Thermotoga naphthophila RKU-10 Gene: Tnap_0741: Iron-containing alcohol dehydrogenase	Thermotoga lettingae TMO Gene: Tlet_0180: Iron-containing alcohol dehydrogenase	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Iron-containing alcohol dehydrogenase
xylF	Thermotoga maritima MSB8 Gene: TM0112: Xylose ABC transporter, permease component	Thermotoga sp. RQ2 Gene: TRQ2_0835: Xylose ABC transporter, permease component	Thermotoga neapolitana DSM 4359 Gene: CTN_0578: Xylose ABC transporter, permease component	Thermotoga petrophila RKU-1 Gene: Tpet_0812: Xylose ABC transporter, permease component	Thermotoga naphthophila RKU-10 Gene: Tnap_0742: Xylose ABC transporter, permease component	* Thermotoga lettingae TMO Site: position = -183 score = 5.22669 sequence = AATTTTTCGGGGAAAGAAATAAT Gene: Tlet_0358: Xylose ABC transporter, permease component	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose ABC transporter, permease component
xylU	Thermotoga maritima MSB8 Gene: TM0113: Acetyl xylan esterase XylU (EC 3.1.1.41)	Thermotoga sp. RQ2 Gene: TRQ2_0834: Acetyl xylan esterase XylU (EC 3.1.1.41)	Thermotoga neapolitana DSM 4359 Gene: CTN_0577: Acetyl xylan esterase XylU (EC 3.1.1.41)	Thermotoga petrophila RKU-1 Gene: Tpet_0811: Acetyl xylan esterase XylU (EC 3.1.1.41)	Thermotoga naphthophila RKU-10 Gene: Tnap_0743: Acetyl xylan esterase XylU (EC 3.1.1.41)	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Acetyl xylan esterase XylU (EC 3.1.1.41)
xylE	Thermotoga maritima MSB8 Gene: TM0114: Xylose ABC transporter, substrate-binding component	Thermotoga sp. RQ2 Gene: TRQ2_0833: Xylose ABC transporter, substrate-binding component	Thermotoga neapolitana DSM 4359 Gene: CTN_0576: Xylose ABC transporter, substrate-binding component	Thermotoga petrophila RKU-1 Gene: Tpet_0810: Xylose ABC transporter, substrate-binding component	Thermotoga naphthophila RKU-10 Gene: Tnap_0744: Xylose ABC transporter, substrate-binding component	Thermotoga lettingae TMO Gene: Tlet_0359: Xylose ABC transporter, substrate-binding component	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose ABC transporter, substrate-binding component
xylK	Thermotoga maritima MSB8 Gene: TM0115: Xylose ABC transporter, ATP-binding component	Thermotoga sp. RQ2 Gene: TRQ2_0832: Xylose ABC transporter, ATP-binding component	Thermotoga neapolitana DSM 4359 Gene: CTN_0575: Xylose ABC transporter, ATP-binding component	Thermotoga petrophila RKU-1 Gene: Tpet_0809: Xylose ABC transporter, ATP-binding component	Thermotoga naphthophila RKU-10 Gene: Tnap_0745: Xylose ABC transporter, ATP-binding component	Thermotoga lettingae TMO Gene: Tlet_0360: Xylose ABC transporter, ATP-binding component	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylose ABC transporter, ATP-binding component
xylB	Thermotoga maritima MSB8 Gene: TM0116: Xylulose kinase (EC 2.7.1.17)	Thermotoga sp. RQ2 Gene: TRQ2_0831: Xylulose kinase (EC 2.7.1.17)	Thermotoga neapolitana DSM 4359 Gene: CTN_0574: Xylulose kinase (EC 2.7.1.17)	Thermotoga petrophila RKU-1 Gene: Tpet_0808: Xylulose kinase (EC 2.7.1.17)	Thermotoga naphthophila RKU-10 Gene: Tnap_0746: Xylulose kinase (EC 2.7.1.17)	Thermotoga lettingae TMO Gene: Tlet_0361: Xylulose kinase (EC 2.7.1.17)	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylulose kinase (EC 2.7.1.17)

CRON 7.
CTN_0633	Thermotoga maritima MSB8	Thermotoga sp. RQ2	* Thermotoga neapolitana DSM 4359 Site: position = -245 score = 5.28183 sequence = GTTATTTCTTACGGAGAAAAAAT Gene: CTN_0633: Transposase, IS605 OrfB family	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Transposase, IS605 OrfB family
xtpF	* Thermotoga maritima MSB8 Site: position = -254 score = 5.76129 sequence = GTTATTTTTTGTAAAGAAAAAAT Gene: TM0060: Xylan oligosaccharide ABC transporter, permease component 1	* Thermotoga sp. RQ2 Site: position = -254 score = 5.76129 sequence = GTTATTTTTTGTAAAGAAAAAAT Gene: TRQ2_0886: Xylan oligosaccharide ABC transporter, permease component 1	Thermotoga neapolitana DSM 4359 Gene: CTN_0634: Xylan oligosaccharide ABC transporter, permease component 1	* Thermotoga petrophila RKU-1 Site: position = -255 score = 5.76129 sequence = GTTATTTTTTGTAAAGAAAAAAT Gene: Tpet_0864: Xylan oligosaccharide ABC transporter, permease component 1	* Thermotoga naphthophila RKU-10 Site: position = -253 score = 5.76129 sequence = GTTATTTTTTGTAAAGAAAAAAT Gene: Tnap_0690: Xylan oligosaccharide ABC transporter, permease component 1	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylan oligosaccharide ABC transporter, permease component 1
xtpG	Thermotoga maritima MSB8 Gene: TM0059: Xylan oligosaccharide ABC transporter, permease component 2	Thermotoga sp. RQ2 Gene: TRQ2_0887: Xylan oligosaccharide ABC transporter, permease component 2	Thermotoga neapolitana DSM 4359 Gene: CTN_0635: Xylan oligosaccharide ABC transporter, permease component 2	Thermotoga petrophila RKU-1 Gene: Tpet_0865: Xylan oligosaccharide ABC transporter, permease component 2	Thermotoga naphthophila RKU-10 Gene: Tnap_0689: Xylan oligosaccharide ABC transporter, permease component 2	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylan oligosaccharide ABC transporter, permease component 2
xtpK	Thermotoga maritima MSB8 Gene: TM0058: Xylan oligosaccharide ABC transporter, ATP-binding protein 1	Thermotoga sp. RQ2 Gene: TRQ2_0888: Xylan oligosaccharide ABC transporter, ATP-binding protein 1	Thermotoga neapolitana DSM 4359 Gene: CTN_0636: Xylan oligosaccharide ABC transporter, ATP-binding protein 1	Thermotoga petrophila RKU-1 Gene: Tpet_0866: Xylan oligosaccharide ABC transporter, ATP-binding protein 1	Thermotoga naphthophila RKU-10 Gene: Tnap_0688: Xylan oligosaccharide ABC transporter, ATP-binding protein 1	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylan oligosaccharide ABC transporter, ATP-binding protein 1
xtpL	Thermotoga maritima MSB8 Gene: TM0057: Xylan oligosaccharide ABC transporter, ATP-binding protein 2	Thermotoga sp. RQ2 Gene: TRQ2_0889: Xylan oligosaccharide ABC transporter, ATP-binding protein 2	Thermotoga neapolitana DSM 4359 Gene: CTN_0637: Xylan oligosaccharide ABC transporter, ATP-binding protein 2	Thermotoga petrophila RKU-1 Gene: Tpet_0867: Xylan oligosaccharide ABC transporter, ATP-binding protein 2	Thermotoga naphthophila RKU-10 Gene: Tnap_0687: Xylan oligosaccharide ABC transporter, ATP-binding protein 2	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylan oligosaccharide ABC transporter, ATP-binding protein 2
xtpE	Thermotoga maritima MSB8 Gene: TM0056: Xylan oligosaccharide ABC transporter, substrate-binding component	Thermotoga sp. RQ2 Gene: TRQ2_0890: Xylan oligosaccharide ABC transporter, substrate-binding component	Thermotoga neapolitana DSM 4359 Gene: CTN_0638: Xylan oligosaccharide ABC transporter, substrate-binding component	Thermotoga petrophila RKU-1 Gene: Tpet_0868: Xylan oligosaccharide ABC transporter, substrate-binding component	Thermotoga naphthophila RKU-10 Gene: Tnap_0686: Xylan oligosaccharide ABC transporter, substrate-binding component	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Xylan oligosaccharide ABC transporter, substrate-binding component
aguA	Thermotoga maritima MSB8 Gene: TM0055: Alpha-glucuronidase (EC 3.2.1.139)	Thermotoga sp. RQ2 Gene: TRQ2_0891: Alpha-glucuronidase (EC 3.2.1.139)	Thermotoga neapolitana DSM 4359 Gene: CTN_0639: Alpha-glucuronidase (EC 3.2.1.139)	Thermotoga petrophila RKU-1 Gene: Tpet_0869: Alpha-glucuronidase (EC 3.2.1.139)	Thermotoga naphthophila RKU-10 Gene: Tnap_0685: Alpha-glucuronidase (EC 3.2.1.139)	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Alpha-glucuronidase (EC 3.2.1.139)

CRON 8.
xynA1	* Thermotoga maritima MSB8 Site: position = -87 score = 5.76129 sequence = ATTTTTTCTTTACAAAAAATAAC Gene: TM0061: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	* Thermotoga sp. RQ2 Site: position = -87 score = 5.76129 sequence = ATTTTTTCTTTACAAAAAATAAC Gene: TRQ2_0885: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	* Thermotoga neapolitana DSM 4359 Site: position = -41 score = 5.28183 sequence = ATTTTTTCTCCGTAAGAAATAAC Gene: CTN_0632: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	* Thermotoga petrophila RKU-1 Site: position = -87 score = 5.76129 sequence = ATTTTTTCTTTACAAAAAATAAC Gene: Tpet_0863: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	* Thermotoga naphthophila RKU-10 Site: position = -87 score = 5.76129 sequence = ATTTTTTCTTTACAAAAAATAAC Gene: Tnap_0691: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0231: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	Thermotogales bacterium TBF 19.5.1	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)
cenC	Thermotoga maritima MSB8 Gene: TM0062: Carbohydrate-binding, CenC domain protein	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1 Gene: Tpet_0862: Carbohydrate-binding, CenC domain protein	Thermotoga naphthophila RKU-10 Gene: Tnap_0692: Carbohydrate-binding, CenC domain protein	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Carbohydrate-binding, CenC domain protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog XylR - Thermotogales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --