Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xylF gene

Properties
Regulog: XylR - Thermotogales
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose; Glucose
Phylum: Thermotogae
Built upon 39 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Thermotoga lettingae TMO
Position: -183
Score: 5.22669
Sequence: AATTTTTCGGGGAAAGAAATAAT
Locus tag: Tlet_0358
Name: xylF
Funciton: Xylose ABC transporter, permease component
Locus tag: Tlet_0359
Name: xylE
Funciton: Xylose ABC transporter, substrate-binding component
Locus tag: Tlet_0360
Name: xylK
Funciton: Xylose ABC transporter, ATP-binding component
Locus tag: Tlet_0361
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylF-xylE-xylK-xylB -183 5.2 AATTTTTCGGGGAAAGAAATAAT Tlet_0358
Thermotoga maritima MSB8
Position: -61
Score: 5.43417
Sequence: ATTATTTCCTGCATATAATTAAT
Locus tag: TM0110
Name: xylR
Funciton: Xylose-responsive transcription regulator, ROK family
Locus tag: TM0111
Name: adhB
Funciton: Iron-containing alcohol dehydrogenase
Locus tag: TM0112
Name: xylF
Funciton: Xylose ABC transporter, permease component
Locus tag: TM0113
Name: xylU
Funciton: Acetyl xylan esterase XylU (EC 3.1.1.41)
Locus tag: TM0114
Name: xylE
Funciton: Xylose ABC transporter, substrate-binding component
Locus tag: TM0115
Name: xylK
Funciton: Xylose ABC transporter, ATP-binding component
Locus tag: TM0116
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylR-adhB-xylF-xylU-xylE-xylK-xylB -61 5.4 ATTATTTCCTGCATATAATTAAT TM0110
Thermotoga naphthophila RKU-10
Position: -61
Score: 5.22702
Sequence: ATTATTTCCCGCATATAATTAAT
Locus tag: Tnap_0740
Name: xylR
Funciton: Xylose-responsive transcription regulator, ROK family
Locus tag: Tnap_0741
Name: adhB
Funciton: Iron-containing alcohol dehydrogenase
Locus tag: Tnap_0742
Name: xylF
Funciton: Xylose ABC transporter, permease component
Locus tag: Tnap_0743
Name: xylU
Funciton: Acetyl xylan esterase XylU (EC 3.1.1.41)
Locus tag: Tnap_0744
Name: xylE
Funciton: Xylose ABC transporter, substrate-binding component
Locus tag: Tnap_0745
Name: xylK
Funciton: Xylose ABC transporter, ATP-binding component
Locus tag: Tnap_0746
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylR-adhB-xylF-xylU-xylE-xylK-xylB -61 5.2 ATTATTTCCCGCATATAATTAAT Tnap_0740
Thermotoga neapolitana DSM 4359
Position: -34
Score: 5.149
Sequence: ATTAATTCCTGCATATAATTAAT
Locus tag: CTN_0581
Name: xylR
Funciton: Xylose-responsive transcription regulator, ROK family
Locus tag: CTN_0580
Name: adhB
Funciton: Iron-containing alcohol dehydrogenase
Locus tag: CTN_0578
Name: xylF
Funciton: Xylose ABC transporter, permease component
xylR-adhB-xylF -34 5.1 ATTAATTCCTGCATATAATTAAT CTN_0581
Thermotoga petrophila RKU-1
Position: -61
Score: 5.22702
Sequence: ATTATTTCCCGCATATAATTAAT
Locus tag: Tpet_0814
Name: xylR
Funciton: Xylose-responsive transcription regulator, ROK family
Locus tag: Tpet_0813
Name: adhB
Funciton: Iron-containing alcohol dehydrogenase
Locus tag: Tpet_0812
Name: xylF
Funciton: Xylose ABC transporter, permease component
Locus tag: Tpet_0811
Name: xylU
Funciton: Acetyl xylan esterase XylU (EC 3.1.1.41)
Locus tag: Tpet_0810
Name: xylE
Funciton: Xylose ABC transporter, substrate-binding component
Locus tag: Tpet_0809
Name: xylK
Funciton: Xylose ABC transporter, ATP-binding component
Locus tag: Tpet_0808
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylR-adhB-xylF-xylU-xylE-xylK-xylB -61 5.2 ATTATTTCCCGCATATAATTAAT Tpet_0814
Thermotoga sp. RQ2
Position: -61
Score: 5.22702
Sequence: ATTATTTCCCGCATATAATTAAT
Locus tag: TRQ2_0837
Name: xylR
Funciton: Xylose-responsive transcription regulator, ROK family
Locus tag: TRQ2_0836
Name: adhB
Funciton: Iron-containing alcohol dehydrogenase
Locus tag: TRQ2_0835
Name: xylF
Funciton: Xylose ABC transporter, permease component
Locus tag: TRQ2_0834
Name: xylU
Funciton: Acetyl xylan esterase XylU (EC 3.1.1.41)
Locus tag: TRQ2_0833
Name: xylE
Funciton: Xylose ABC transporter, substrate-binding component
Locus tag: TRQ2_0832
Name: xylK
Funciton: Xylose ABC transporter, ATP-binding component
Locus tag: TRQ2_0831
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylR-adhB-xylF-xylU-xylE-xylK-xylB -61 5.2 ATTATTTCCCGCATATAATTAAT TRQ2_0837