Profile of regulator XylR in Thermotogales
Properties
| Regulator family: |
ROK |
| Regulation mode: |
repressor |
| Biological process: |
Xylose utilization |
| Effector: |
Xylose; Glucose |
| Regulog: |
XylR - Thermotogales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Thermotoga maritima MSB8
|
|
TM0309 |
xtpN |
-45 |
5.4 |
GAAATTTCTTTAGAGGAAAAAAT |
|
TM0070 |
xynB |
-189 |
5.8 |
ATTTTTTCCTTTCGGGAAATATT |
|
TM0071 |
xloE |
-53 |
5.8 |
AATATTTCCCGAAAGGAAAAAAT |
|
TM0061 |
xynA1 |
-87 |
5.8 |
ATTTTTTCTTTACAAAAAATAAC |
|
TM0060 |
xtpF |
-254 |
5.8 |
GTTATTTTTTGTAAAGAAAAAAT |
|
TM0110 |
xylR |
-61 |
5.4 |
ATTATTTCCTGCATATAATTAAT |
|
TM1667 |
xylA |
-38 |
5 |
ATAATTGATTGATAGAAAAAATT |
|
Thermotoga sp. RQ2
|
|
TRQ2_0622 |
xtpN |
-51 |
5.4 |
GAAATTTCTTTAGAGGAAAAAAT |
|
TRQ2_0876 |
xloE |
-53 |
5.8 |
AATATTTCCCGAAAGGAAAAAAT |
|
TRQ2_0877 |
xynB |
-189 |
5.8 |
ATTTTTTCCTTTCGGGAAATATT |
|
TRQ2_1549 |
xynA3 |
-40 |
5.2 |
GTTTTTTCCTTTCTGAAAATAAC |
|
TRQ2_0886 |
xtpF |
-254 |
5.8 |
GTTATTTTTTGTAAAGAAAAAAT |
|
TRQ2_0837 |
xylR |
-61 |
5.2 |
ATTATTTCCCGCATATAATTAAT |
|
TRQ2_1162 |
xylA |
-38 |
5 |
ATAATTGATTGATAGAAAAAATT |
|
TRQ2_0885 |
xynA1 |
-87 |
5.8 |
ATTTTTTCTTTACAAAAAATAAC |
|
Thermotoga neapolitana DSM 4359
|
|
CTN_0623 |
xynB |
-190 |
5.8 |
ATTTTTTCCTTTCGGGAAATATT |
|
CTN_0622 |
xloE |
-52 |
5.8 |
AATATTTCCCGAAAGGAAAAAAT |
|
CTN_0632 |
xynA1 |
-41 |
5.3 |
ATTTTTTCTCCGTAAGAAATAAC |
|
CTN_1302 |
xynA3 |
-41 |
5.2 |
GTTTTTTCCTTTCTGAAAATAAC |
|
CTN_0633 |
null |
-245 |
5.3 |
GTTATTTCTTACGGAGAAAAAAT |
|
CTN_0379 |
xtpN |
-65 |
4.3 |
AaaATTgtTTGgtAgaAAAaAAg |
|
CTN_0581 |
xylR |
-34 |
5.1 |
ATTAATTCCTGCATATAATTAAT |
|
CTN_0720 |
xylA |
-38 |
5 |
ATAATTGATTGATAGAAAAAATT |
|
Thermotoga petrophila RKU-1
|
|
Tpet_0608 |
xtpN |
-51 |
4.9 |
GAAAGTTCTTTAGAGGAAAAAAT |
|
Tpet_0854 |
xynB |
-189 |
5.4 |
TTTTTTTCCTTTCGGGAAATATT |
|
Tpet_0853 |
xloE |
-54 |
5.4 |
AATATTTCCCGAAAGGAAAAAAA |
|
Tpet_0863 |
xynA1 |
-87 |
5.8 |
ATTTTTTCTTTACAAAAAATAAC |
|
Tpet_0864 |
xtpF |
-255 |
5.8 |
GTTATTTTTTGTAAAGAAAAAAT |
|
Tpet_0814 |
xylR |
-61 |
5.2 |
ATTATTTCCCGCATATAATTAAT |
|
Tpet_1124 |
xylA |
-38 |
5 |
ATAATTGATTGATAGAAAAAATT |
|
Thermotoga naphthophila RKU-10
|
|
Tnap_0701 |
xloE |
-53 |
5.8 |
AATATTTCCCGAAAGGAAAAAAT |
|
Tnap_0700 |
xynB |
-189 |
5.8 |
ATTTTTTCCTTTCGGGAAATATT |
|
Tnap_0691 |
xynA1 |
-87 |
5.8 |
ATTTTTTCTTTACAAAAAATAAC |
|
Tnap_0690 |
xtpF |
-253 |
5.8 |
GTTATTTTTTGTAAAGAAAAAAT |
|
Tnap_0948 |
xtpN |
-13 |
4.9 |
gaaATTTCTTtAgtgaAAAaAAT |
|
Tnap_0740 |
xylR |
-61 |
5.2 |
ATTATTTCCCGCATATAATTAAT |
|
Tnap_1139 |
xylA |
-38 |
5 |
ATAATTGATTGATAGAAAAAATT |
|
Thermotoga lettingae TMO
|
|
Tlet_0350 |
xloE |
-52 |
5.2 |
AATTTTTCGAGGAAATAAATAAT |
|
Tlet_0358 |
xylF |
-183 |
5.2 |
AATTTTTCGGGGAAAGAAATAAT |
Export
|
Regulatory Sites
|
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