Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Shewanella frigidimarina NCIMB 400

Reference regulog properties
Source regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Propagated regulon:
Target genome Shewanella frigidimarina NCIMB 400
Orthologous TF(s) Sfri_3292
Regulated genes 178
Built upon 2713 sites [see more]
Predicted regulatory interactions in Shewanella frigidimarina NCIMB 400
Locus tag Position Score Sequence
Position: -243
Score: 3.7
Sequence: AACTTTGAACTAGATCCCGAAA
Position: -139
Score: 3.7
Sequence: AGATTTGCGCCAGATCACGCTT
Locus tag: Sfri_0051
Sfri_0051 -243 3.7 AACTTTGAACTAGATCCCGAAA
-139 3.7 AGATTTGCGCCAGATCACGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4503
Ortholog function: formate dehydrogenase chain D (EC 1.2.1.2)
Shewanella putrefaciens CN-32 Sputcn32_0343 -187 4 AAGTTTGAAGTAGATCATCAAA
-91 4.1 AATTGCGATAGATCACGCATTT
Shewanella sp W3-18-1 Sputw3181_3865 -131 4 AAGTTTGAAGTAGATCATCAAA
-35 4.1 AATTGCGATAGATCACGCATTT
Shewanella sp ANA-3 Shewana3_3910 -187 4 TTGTTTGAGGTGGATCATCAAA
-91 4 AATTGCGACGGATCACGCATTT
Shewanella sp MR-4 Shewmr4_3714 -187 4 TTGTTTGAGGTGGATCATCAAA
-91 4 AATTGCGACGGATCACGCATTT
Shewanella sp MR-7 Shewmr7_3785 -187 4 TTGTTTGAGGTGGATCATCAAA
-91 4 AATTGCGACGGATCACGCATTT
Shewanella baltica OS155 Sbal_4130 -187 4 TAGTTTGAACTAGATCATCAAA
Shewanella frigidimarina NCIMB 400 Sfri_0051 -139 3.7 AGATTTGCGCCAGATCACGCTT
Shewanella amazonensis SB2B Sama_3619 -186 3.9 AAGTTTGAAGTGGATCATCAAA
Shewanella loihica PV-4 Shew_0053 -190 4 TAGTTTGAACTGGATCATCAAA
Shewanella pealeana ATCC 700345 Spea_4143 -183 4.2 TAGTTTGAACTAGATCAACTAT
-87 3.9 AAGTGTGATCGACCACTAACTT
-20 3.9 TTGCGTGACAAGGATAAAAAAT
Shewanella halifaxensis HAW-EB4 Shal_0099 -181 4.2 TAGTTTGAACTAGATCAACTAT
-85 4.5 AAATGTGATCTACTACTAATTT
Shewanella piezotolerans WP3 swp_5036 -86 4.2 AAGTGTGATCTGCAGCTAACTT
-25 4 AAAGGTAATTGAAATCTCATAA
Shewanella sediminis HAW-EB3 Ssed_4427 -153 3.9 TAACTTGAGCTGGATCATCAAT
-59 3.8 TTAAATGAGAGAGATCACGCAT
Shewanella woodyi ATCC 51908 Swoo_4819 -163 4.3 TTTTTTGAGCTAGATCATCAAA
Position: -229
Score: 4.1
Sequence: AAGCGTGATCTGGCGCAAATCT
Position: -125
Score: 4.2
Sequence: TTTCGGGATCTAGTTCAAAGTT
Locus tag: Sfri_0052
Sfri_0052 -229 4.1 AAGCGTGATCTGGCGCAAATCT
-125 4.2 TTTCGGGATCTAGTTCAAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4504
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO4504 -130 4 TTTGATGATCCACTTCAAACTA
Shewanella putrefaciens CN-32 Sputcn32_0342 -140 4.1 TTTGATGATCTACTTCAAACTT
Shewanella sp W3-18-1 Sputw3181_3866 -140 4.1 TTTGATGATCTACTTCAAACTT
Shewanella sp ANA-3 Shewana3_3911 -225 3.8 ATGCGTGATCCGTCGCAATTAT
-131 3.9 TTTGATGATCCACCTCAAACAA
Shewanella sp MR-4 Shewmr4_3715 -225 3.8 ATGCGTGATCCGTCGCAATTAT
-131 3.9 TTTGATGATCCACCTCAAACAA
Shewanella sp MR-7 Shewmr7_3786 -225 3.8 ATGCGTGATCCGTCGCAATTAT
-131 3.9 TTTGATGATCCACCTCAAACAA
Shewanella baltica OS155 Sbal_4131 -136 4.2 TTTGATGATCTAGTTCAAACTA
Shewanella frigidimarina NCIMB 400 Sfri_0052 -125 4.2 TTTCGGGATCTAGTTCAAAGTT
Shewanella amazonensis SB2B Sama_3618 -113 4 TTTGATGATCCACTTCAAACTT
Shewanella loihica PV-4 Shew_0054 -127 4.1 TTTGATGATCCAGTTCAAACTA
Shewanella pealeana ATCC 700345 Spea_4142 -123 4.2 ATAGTTGATCTAGTTCAAACTA
Shewanella halifaxensis HAW-EB4 Shal_0100 -124 4.2 ATAGTTGATCTAGTTCAAACTA
Shewanella piezotolerans WP3 swp_5034 -148 4 TTATGAGATTTCAATTACCTTT
-87 3.8 AAGTTAGCTGCAGATCACACTT
Shewanella sediminis HAW-EB3 Ssed_4426 -217 4.1 ATGCGTGATCTCTCTCATTTAA
-123 3.9 ATTGATGATCCAGCTCAAGTTA
Shewanella woodyi ATCC 51908 Swoo_4818 -148 4.2 TTTGATGATCTAGCTCAAAAAA
Position: -182
Score: 4.4
Sequence: AAACATGATCTGCTTAACAAAT
Position: -132
Score: 4
Sequence: ATCTATTAGCTATCTCACATTT
Locus tag: Sfri_0076
Sfri_0076 -182 4.4 AAACATGATCTGCTTAACAAAT
-132 4 ATCTATTAGCTATCTCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4520
Ortholog function: Oxygen-independent coproporphyrinogen III oxidase, putative
Shewanella oneidensis MR-1 SO4520 -172 4.4 AAACATGATCTGCTTAACAAAA
Shewanella putrefaciens CN-32 Sputcn32_3506 -172 4.4 AAACATGATCTGCTTAACAAAA
Shewanella sp W3-18-1 Sputw3181_0400 -172 4.4 AAACATGATCTGCTTAACAAAA
Shewanella sp ANA-3 Shewana3_3926 -172 4.4 AAACATGATCTGCTTAACAAAA
Shewanella sp MR-4 Shewmr4_3730 -172 4.4 AAACATGATCTGCTTAACAAAA
Shewanella sp MR-7 Shewmr7_3801 -172 4.4 AAACATGATCTGCTTAACAAAA
Shewanella baltica OS155 Sbal_0219 -172 4.4 AAACATGATCTGCTTAACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0076 -182 4.4 AAACATGATCTGCTTAACAAAT
Shewanella amazonensis SB2B Sama_3604 -171 3.9 AAATATGCGCTGCTTAACAAAA
Shewanella loihica PV-4 Shew_0073 -182 4.1 AAACATGACATGCTTAACAATT
Shewanella pealeana ATCC 700345 Spea_4126 -164 4.4 AAGTATGATCCGCTTAACAAAA
Shewanella halifaxensis HAW-EB4 Shal_0116 -164 4.2 AAGTATGACCCGCTTAACAAAA
Shewanella piezotolerans WP3 swp_5018 -166 4.2 AAGTATGACTTACTTAACAAAA
Shewanella sediminis HAW-EB3 Ssed_4414 -203 4 AAACATGACTTGCTTAACAAAA
Shewanella woodyi ATCC 51908 Swoo_4806 -184 4 AAACATGACTCGCTTAACAAAA
Position: -159
Score: 4.7
Sequence: ATTTGTGACTCGACTCACGCTA
Locus tag: Sfri_0081
Sfri_0081 -159 4.7 ATTTGTGACTCGACTCACGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: etfD
Ortholog function: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Shewanella oneidensis MR-1 SO4453 -171 4.3 ATCTGTGACAGTGCTCACCCAA
Shewanella putrefaciens CN-32 Sputcn32_0388 -171 4.2 ATCTGTGACAGTCCTCACCCAA
Shewanella sp W3-18-1 Sputw3181_0242 -171 4.2 ATCTGTGACAGTCCTCACCCAA
Shewanella sp ANA-3 Shewana3_0273 -175 4.3 ATCTGTGACAGTGCTCACCCAA
Shewanella sp MR-4 Shewmr4_0272 -175 4.3 AACTGTGACAGCGCTCACCCAA
Shewanella sp MR-7 Shewmr7_3749 -175 4.3 AACTGTGACAGCGCTCACCCAA
Shewanella baltica OS155 Sbal_0283 -170 4.4 ATCTGTGACAGTCCTCACCTAA
Shewanella denitrificans OS217 Sden_0100 -130 4.6 TTTTGTGACACAGCTCACCTCA
Shewanella frigidimarina NCIMB 400 Sfri_0081 -159 4.7 ATTTGTGACTCGACTCACGCTA
Shewanella amazonensis SB2B Sama_3523 -157 4.3 AATTGTGACGCCGCTCACTCAG
Shewanella loihica PV-4 Shew_0086 -148 4.5 TAATGTGACACCGCTCACGAAG
Shewanella pealeana ATCC 700345 Spea_4121 -181 4.1 TTTTGTGACAGTTATCACGGCA
Shewanella halifaxensis HAW-EB4 Shal_0121 -180 4.2 TTTTGTGACAGTTATCACGCCA
Shewanella piezotolerans WP3 swp_5010 -176 4.4 TTTTGTGACACTAATCACCTCA
Shewanella sediminis HAW-EB3 Ssed_4403 -150 4.8 TTTTGTGACACCCCTCACATAC
Shewanella woodyi ATCC 51908 Swoo_4794 -135 4.7 TTTTGTGACGACACTCACATTC
Position: -186
Score: 4.5
Sequence: TAGCGTGAGTCGAGTCACAAAT
Locus tag: Sfri_0082
Sfri_0082 -186 4.5 TAGCGTGAGTCGAGTCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: moaA
Ortholog function: molybdenum cofactor biosynthesis protein MoaA
Shewanella oneidensis MR-1 SO4452 -220 3.8 TTGGGTGAGCACTGTCACAGAT
Shewanella putrefaciens CN-32 Sputcn32_0389 -187 3.8 TTGGGTGAGGACTGTCACAGAT
Shewanella sp W3-18-1 Sputw3181_0243 -187 3.8 TTGGGTGAGGACTGTCACAGAT
Shewanella sp ANA-3 Shewana3_0274 -187 3.8 TTGGGTGAGCACTGTCACAGAT
Shewanella sp MR-4 Shewmr4_0273 -187 3.9 TTGGGTGAGCGCTGTCACAGTT
Shewanella sp MR-7 Shewmr7_3748 -187 3.9 TTGGGTGAGCGCTGTCACAGTT
Shewanella baltica OS155 Sbal_0284 -187 4 TTAGGTGAGGACTGTCACAGAT
Shewanella denitrificans OS217 Sden_0101 -186 4.3 TGAGGTGAGCTGTGTCACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0082 -186 4.5 TAGCGTGAGTCGAGTCACAAAT
Shewanella amazonensis SB2B Sama_3524 -180 4 CTGAGTGAGCGGCGTCACAATT
Shewanella loihica PV-4 Shew_0087 -189 4.4 CTTCGTGAGCGGTGTCACATTA
Shewanella pealeana ATCC 700345 Spea_4120 -222 4.1 TGCCGTGATAACTGTCACAAAA
Shewanella halifaxensis HAW-EB4 Shal_0122 -222 4.3 TGGCGTGATAACTGTCACAAAA
Shewanella piezotolerans WP3 swp_5009 -222 4.3 TGAGGTGATTAGTGTCACAAAA
Shewanella sediminis HAW-EB3 Ssed_4402 -221 4.4 GTATGTGAGGGGTGTCACAAAA
Shewanella woodyi ATCC 51908 Swoo_4793 -222 4.3 GAATGTGAGTGTCGTCACAAAA
Position: 7
Score: 4.1
Sequence: AAGTGTTATTTTTTGCGCAAAT
Locus tag: Sfri_0084
Sfri_0084 7 4.1 AAGTGTTATTTTTTGCGCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: moaD
Ortholog function: molybdenum cofactor biosynthesis protein MoaD
Shewanella oneidensis MR-1 SO4450 -220 3.8 TTGGGTGAGCACTGTCACAGAT
Shewanella putrefaciens CN-32 Sputcn32_0391 -187 3.8 TTGGGTGAGGACTGTCACAGAT
Shewanella sp W3-18-1 Sputw3181_0245 -187 3.8 TTGGGTGAGGACTGTCACAGAT
Shewanella sp ANA-3 Shewana3_0276 -187 3.8 TTGGGTGAGCACTGTCACAGAT
Shewanella sp MR-4 Shewmr4_0275 -187 3.9 TTGGGTGAGCGCTGTCACAGTT
Shewanella sp MR-7 Shewmr7_3746 -187 3.9 TTGGGTGAGCGCTGTCACAGTT
Shewanella baltica OS155 Sbal_0286 -187 4 TTAGGTGAGGACTGTCACAGAT
Shewanella denitrificans OS217 Sden_0103 -186 4.3 TGAGGTGAGCTGTGTCACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0084 -186 4.5 TAGCGTGAGTCGAGTCACAAAT
Shewanella amazonensis SB2B Sama_3527 -180 4 CTGAGTGAGCGGCGTCACAATT
Shewanella loihica PV-4 Shew_0090 -189 4.4 CTTCGTGAGCGGTGTCACATTA
Shewanella pealeana ATCC 700345 Spea_4117 -222 4.1 TGCCGTGATAACTGTCACAAAA
Shewanella halifaxensis HAW-EB4 Shal_0125 -222 4.3 TGGCGTGATAACTGTCACAAAA
Shewanella piezotolerans WP3 swp_5006 -222 4.3 TGAGGTGATTAGTGTCACAAAA
Shewanella sediminis HAW-EB3 Ssed_4399 -221 4.4 GTATGTGAGGGGTGTCACAAAA
Shewanella woodyi ATCC 51908 Swoo_4790 -222 4.3 GAATGTGAGTGTCGTCACAAAA
Position: 22
Score: 3.7
Sequence: TTATATGTGATATTTCACAAAC
Position: 24
Score: 4.5
Sequence: ATATGTGATATTTCACAAACAT
Locus tag: Sfri_0088
Sfri_0088 22 3.7 TTATATGTGATATTTCACAAAC
24 4.5 ATATGTGATATTTCACAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: modC
Ortholog function: molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
Shewanella oneidensis MR-1 SO4446 -220 3.8 TTGGGTGAGCACTGTCACAGAT
Shewanella putrefaciens CN-32 Sputcn32_0395 -187 3.8 TTGGGTGAGGACTGTCACAGAT
Shewanella sp W3-18-1 Sputw3181_0249 -187 3.8 TTGGGTGAGGACTGTCACAGAT
Shewanella sp ANA-3 Shewana3_0280 -187 3.8 TTGGGTGAGCACTGTCACAGAT
Shewanella sp MR-4 Shewmr4_0279 -187 3.9 TTGGGTGAGCGCTGTCACAGTT
Shewanella sp MR-7 Shewmr7_3742 -187 3.9 TTGGGTGAGCGCTGTCACAGTT
Shewanella denitrificans OS217 Sden_0107 -186 4.3 TGAGGTGAGCTGTGTCACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0088 -186 4.5 TAGCGTGAGTCGAGTCACAAAT
Shewanella amazonensis SB2B Sama_3531 -180 4 CTGAGTGAGCGGCGTCACAATT
Shewanella pealeana ATCC 700345 Spea_4113 -222 4.1 TGCCGTGATAACTGTCACAAAA
Shewanella sediminis HAW-EB3 Ssed_4395 -221 4.4 GTATGTGAGGGGTGTCACAAAA
Shewanella woodyi ATCC 51908 Swoo_4786 -222 4.3 GAATGTGAGTGTCGTCACAAAA
Position: -213
Score: 4.2
Sequence: TTTTGTGATAACAATCTCAGCT
Locus tag: Sfri_0179
Sfri_0179 -213 4.2 TTTTGTGATAACAATCTCAGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccmA
Ortholog function: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Shewanella oneidensis MR-1 SO0263 -222 4.2 TTTTGTGATTAGAATCTCAGCA
Shewanella putrefaciens CN-32 Sputcn32_3727 -213 3.9 TTTTGTGATTAGAATCTCAGCG
Shewanella sp W3-18-1 Sputw3181_0188 -213 3.9 TTTTGTGATTAGAATCTCAGCG
Shewanella sp ANA-3 Shewana3_0231 -222 4.2 TTTTGTGATTAGAATCTCAGCA
Shewanella sp MR-4 Shewmr4_0231 -222 4.2 TTTTGTGATTAGAATCTCAGCA
Shewanella sp MR-7 Shewmr7_0226 -222 3.9 TTTTGTGATTAGAATCTCAGCG
Shewanella baltica OS155 Sbal_0228 -212 4.4 TTTTGTGATTAGAATCTCAACA
Shewanella denitrificans OS217 Sden_3569 -186 4 TTTTGTGATAAGCCTCCCAGCT
Shewanella frigidimarina NCIMB 400 Sfri_0179 -213 4.2 TTTTGTGATAACAATCTCAGCT
Shewanella amazonensis SB2B Sama_0245 -207 3.8 TTTTGTGAGTTCCCTCCCAGCT
Shewanella loihica PV-4 Shew_0190 -223 4.8 TTTTGTGATTAATATCAGAATT
Shewanella pealeana ATCC 700345 Spea_0215 -212 4.1 TTTTGTGATATTAATCTCGCCA
-112 3.8 ATATTCGAACTACATCAAATTG
Shewanella halifaxensis HAW-EB4 Shal_4104 -212 3.9 TTTTGTGACATAAACCGTACTA
-112 3.8 ATATTCGAACTACATCAAATTG
Shewanella piezotolerans WP3 swp_2043 -212 5 ATTTGTGATTTAAATCGCGTTA
-112 3.8 ATATTCGAACTACATCAAATTG
Shewanella sediminis HAW-EB3 Ssed_4287 -223 4.5 TTTTGTGATTTCAATCAAAGCT
Shewanella woodyi ATCC 51908 Swoo_4659 -224 4.2 TTTTATGACTTTAATCAAAGTA
Position: -233
Score: 3.9
Sequence: CAATTTGATATGGTTCCAAAAT
Position: -133
Score: 4.1
Sequence: AGCTGAGATTGTTATCACAAAA
Locus tag: Sfri_0180
Sfri_0180 -233 3.9 CAATTTGATATGGTTCCAAAAT
-133 4.1 AGCTGAGATTGTTATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scyA
Ortholog function: cytochrome c-type protein
Shewanella oneidensis MR-1 SO0264 -234 4 CAATTTGATATGGTTCCAATAA
-125 4.1 TGCTGAGATTCTAATCACAAAA
Shewanella putrefaciens CN-32 Sputcn32_3726 -229 4 CAATTTGATGTGGTTCCAATAA
-129 3.7 CGCTGAGATTCTAATCACAAAA
Shewanella sp W3-18-1 Sputw3181_0189 -229 4 CAATTTGATGTGGTTCCAATAA
-129 3.7 CGCTGAGATTCTAATCACAAAA
Shewanella sp ANA-3 Shewana3_0232 -234 4 CAATTTGATGTGGTTCCAATAA
-125 4.1 TGCTGAGATTCTAATCACAAAA
Shewanella sp MR-4 Shewmr4_0232 -234 4 CAATTTGATGTGGTTCCAATAA
-125 4.1 TGCTGAGATTCTAATCACAAAA
Shewanella sp MR-7 Shewmr7_0227 -234 4 CAATTTGATGTGGTTCCAATAA
-125 3.7 CGCTGAGATTCTAATCACAAAA
Shewanella baltica OS155 Sbal_0229 -228 3.9 CAATATGATGTGGTTCCAATAA
-128 4.5 TGTTGAGATTCTAATCACAAAA
Shewanella denitrificans OS217 Sden_3568 -131 3.8 AGCTGGGAGGCTTATCACAAAA
-109 4.1 AGGTGTGATTTTATTAACTTTA
Shewanella frigidimarina NCIMB 400 Sfri_0180 -233 3.9 CAATTTGATATGGTTCCAAAAT
-133 4.1 AGCTGAGATTGTTATCACAAAA
Shewanella amazonensis SB2B Sama_0246 -225 4 CAATTTGATGCAGTTCCAATAA
Shewanella loihica PV-4 Shew_0191 -242 3.8 CAATTTGATATGCTTCCAAAAA
-131 4.8 AATTCTGATATTAATCACAAAA
Shewanella pealeana ATCC 700345 Spea_0216 -230 4.4 CAATTTGATGTAGTTCGAATAT
-130 4 TGGCGAGATTAATATCACAAAA
Shewanella halifaxensis HAW-EB4 Shal_4103 -230 4.4 CAATTTGATGTAGTTCGAATAT
Shewanella piezotolerans WP3 swp_2044 -231 4.4 CAATTTGATGTAGTTCGAATAT
-131 4.8 TAACGCGATTTAAATCACAAAT
Shewanella sediminis HAW-EB3 Ssed_4286 -145 4.4 AGCTTTGATTGAAATCACAAAA
Shewanella woodyi ATCC 51908 Swoo_4658 -256 3.8 CAATTTGATATGCTTCCAAAAA
-144 3.9 TACTTTGATTAAAGTCATAAAA
Position: -184
Score: 4.3
Sequence: ATAAGTGCTATTAGTCACAAAT
Locus tag: Sfri_0225
Sfri_0225 -184 4.3 ATAAGTGCTATTAGTCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sputcn32_3857
Ortholog function: hypothetical protein
Shewanella sp ANA-3 Shewana3_4030 -316 4.9 TTTTCTGATTCAGCTCACATTA
Shewanella sp MR-4 Shewmr4_3822 -316 4.6 TTTTCTGACGCCGCTCACATTA
Shewanella sp MR-7 Shewmr7_3913 -316 4.5 TTTTCTGACACCGCTCACATTA
Shewanella frigidimarina NCIMB 400 Sfri_0225 -184 4.3 ATAAGTGCTATTAGTCACAAAT
Position: -321
Score: 3.9
Sequence: CAAAGTGATCTTGATCAATGTT
Locus tag: Sfri_0258
Sfri_0258 -321 3.9 CAAAGTGATCTTGATCAATGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4606
Ortholog function: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Shewanella oneidensis MR-1 SO4606 -317 4.2 AGAAGTGATCTTGATCAATTTT
Shewanella putrefaciens CN-32 Sputcn32_3782 -309 4.4 ATAAGTGATCTTGATCAATATT
Shewanella sp W3-18-1 Sputw3181_0133 -309 4.4 ATAAGTGATCTTGATCAATATT
Shewanella sp ANA-3 Shewana3_3991 -318 4.2 AGAAGTGATCTTGATCAATTTT
Shewanella sp MR-4 Shewmr4_3791 -318 4.2 AGAAGTGATCTTGATCAATTTT
Shewanella sp MR-7 Shewmr7_3864 -317 4.2 AGAAGTGATCTTGATCAATTTT
Shewanella baltica OS155 Sbal_0154 -317 4.4 ATAAGTGATCTTGATCAATATT
Shewanella denitrificans OS217 Sden_3517 -316 4.4 AAAAGTGATCTTGATCAATATT
Shewanella frigidimarina NCIMB 400 Sfri_0258 -321 3.9 CAAAGTGATCTTGATCAATGTT
Shewanella amazonensis SB2B Sama_3483 -318 4.4 TAAAGTGATCTTGATCAATATT
Shewanella loihica PV-4 Shew_0125 -321 4.4 AAAAGTGATCTTGATCAATATT
-264 4 TTATTTGTTATATCGCACAATT
Position: -146
Score: 4.3
Sequence: AGTCGAGATCTAGCTCGCATTT
Locus tag: Sfri_0272
Sfri_0272 -146 4.3 AGTCGAGATCTAGCTCGCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cymA
Ortholog function: membrane anchored tetraheme cytochrome c, CymA
Shewanella oneidensis MR-1 SO4591 -307 4 AAATGTCGCCTTGATCACATTT
Shewanella putrefaciens CN-32 Sputcn32_0286 -306 4.7 AAGTGTGCTATCGGTCACAATT
Shewanella sp W3-18-1 Sputw3181_3916 -306 4.1 AAGTGTGCCATCGATTACAATT
Shewanella sp ANA-3 Shewana3_3977 -309 4 AAATGTCGCGTGGATCACATTT
Shewanella sp MR-4 Shewmr4_3777 -308 4.3 AAATGTCGTCTTGATCACATTT
Shewanella sp MR-7 Shewmr7_3850 -318 4.5 AAATGTAGTGTTGATCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_0272 -146 4.3 AGTCGAGATCTAGCTCGCATTT
Shewanella loihica PV-4 Shew_3540 -169 4.2 TATTATGAGCAATTTCATAAAA
Shewanella piezotolerans WP3 swp_4806 -276 3.8 ATTTGAGATCTAAAAAAAAATA
Shewanella sediminis HAW-EB3 Ssed_0216 -86 3.7 CAGTATGATCTAGTTTATAATT
Shewanella woodyi ATCC 51908 Swoo_0195 -152 4.3 AATTTTTATATTTATCAAAATA
Position: -51
Score: 4.3
Sequence: TTGTGTTACCTAGCACACATAT
Locus tag: Sfri_0361
Sfri_0361 -51 4.3 TTGTGTTACCTAGCACACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0355
Ortholog function: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Shewanella oneidensis MR-1 SO0355 -84 4.4 TTATTTGCGCTACATCACAAAA
Shewanella putrefaciens CN-32 Sputcn32_3634 -84 3.8 CTATTTGCGCAGCATCACAAAA
-45 3.9 TAAAGTGATGGGGTAAAAATAA
Shewanella sp W3-18-1 Sputw3181_3774 -84 3.8 CTATTTGCGCAGCATCACAAAA
-45 3.9 TAAAGTGATGGGGTAAAAATAA
Shewanella baltica OS155 Sbal_0351 -73 3.8 CTATTTGCGCGGGCTCACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0361 -51 4.3 TTGTGTTACCTAGCACACATAT
Shewanella pealeana ATCC 700345 Spea_3882 -124 4.3 AAGTTTGTCTTAGATCACATTT
Shewanella halifaxensis HAW-EB4 Shal_0387 -124 4.3 AAGTTTGTCTTAGATCACATTT
Shewanella piezotolerans WP3 swp_0315 -127 3.9 AAAGTTGTCATAGATCACATTT
Shewanella sediminis HAW-EB3 Ssed_0331 -110 3.9 GAATTTGTCATAGATCACATTT
Position: -7
Score: 4.1
Sequence: AAGTGTAATGAAATCCACAATA
Locus tag: Sfri_0385
Sfri_0385 -7 4.1 AAGTGTAATGAAATCCACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0296
Ortholog function: integral membrane domain protein
Shewanella frigidimarina NCIMB 400 Sfri_0385 -7 4.1 AAGTGTAATGAAATCCACAATA
Shewanella pealeana ATCC 700345 Spea_0248 -118 4.3 ATAGGTGATCTTTATCATAGTA
Shewanella halifaxensis HAW-EB4 Shal_4072 -133 4.3 ATAGGTGATCTTTATCATAGTA
Shewanella piezotolerans WP3 swp_2077 -120 4.3 ATGAGTGATCTTGTTCATAGTA
Position: -324
Score: 4.1
Sequence: TTATTTTATCTCACTCACAACT
Position: -142
Score: 4
Sequence: TTTTGCGATCCCAACCTCAAAA
Position: -112
Score: 3.5
Sequence: TTTTGAGCCTAAGATCAAAGTT
Locus tag: Sfri_0404
Sfri_0404 -324 4.1 TTATTTTATCTCACTCACAACT
-142 4 TTTTGCGATCCCAACCTCAAAA
-112 3.5 TTTTGAGCCTAAGATCAAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbA
Ortholog function: nitrosative stress induced protein
Shewanella oneidensis MR-1 SO0324 -97 4.1 TTTTGTGCGCACCTTCATAAAT
Shewanella putrefaciens CN-32 Sputcn32_3663 -96 4.1 TTTTGTGCGCACCTTCATAAAT
Shewanella sp W3-18-1 Sputw3181_3804 -96 4.1 TTTTGTGCGCACCTTCATAAAT
Shewanella sp ANA-3 Shewana3_3845 -97 4.1 TTTTGTGCGCATCTTCATAAAT
Shewanella sp MR-4 Shewmr4_3649 -97 4.1 TTTTGTGCGCATCTTCATAAAT
Shewanella sp MR-7 Shewmr7_0295 -97 4.1 TTTTGTGCGCATCTTCATAAAT
Shewanella baltica OS155 Sbal_4067 -96 4.1 TTTTGTGCGCACCTTCATAAAT
Shewanella frigidimarina NCIMB 400 Sfri_0404 -142 4 TTTTGCGATCCCAACCTCAAAA
Shewanella amazonensis SB2B Sama_3326 -94 3.6 TTTTGTGCGCATCTTCATGCTT
Shewanella loihica PV-4 Shew_0259 -96 4.1 TTTTGTGCGCATCTTCATAATT
Shewanella pealeana ATCC 700345 Spea_0303 -96 3.9 TTTTGTGCACATCTTCAAAGTT
Shewanella halifaxensis HAW-EB4 Shal_3986 -96 4 TTTTGTGCACATCTTCAAACTT
Shewanella piezotolerans WP3 swp_2171 -96 4 TTTTGTGCGCACCTTCAAACTT
Shewanella sediminis HAW-EB3 Ssed_4199 -187 3.9 TTTTGTGCACATCTTCATACTT
Shewanella woodyi ATCC 51908 Swoo_0395 -82 3.4 TTCTGTGCGCACCTTCATAGAT
Position: -85
Score: 4.1
Sequence: TATAGTGACTTCAATCACAACG
Locus tag: Sfri_0421
Sfri_0421 -85 4.1 TATAGTGACTTCAATCACAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvC
Ortholog function: Ketol-acid reductoisomerase (EC 1.1.1.86)
Shewanella oneidensis MR-1 SO4349 -86 4 TATAGTGACTTCAATCACAACC
Shewanella putrefaciens CN-32 Sputcn32_3615 -86 4.3 TATAGTGATTTCAATCACAACC
Shewanella sp W3-18-1 Sputw3181_3755 -86 4.3 TATAGTGATTTCAATCACAACC
Shewanella sp ANA-3 Shewana3_0355 -86 4.3 TATAGTGATTTCAATCACAACC
Shewanella sp MR-4 Shewmr4_0361 -86 4.3 TATAGTGATTTCAATCACAACC
Shewanella sp MR-7 Shewmr7_3665 -86 4.3 TATAGTGATTTCAATCACAACC
Shewanella baltica OS155 Sbal_4032 -85 4.3 TATAGTGATTTCAATCACAACC
Shewanella frigidimarina NCIMB 400 Sfri_0421 -85 4.1 TATAGTGACTTCAATCACAACG
Shewanella amazonensis SB2B Sama_3282 -88 4.4 TATAGTGAGTTCAATCACAATC
Shewanella loihica PV-4 Shew_0288 -126 3.7 CAATGTGACGTTTCGAATATAT
-77 3.8 ATAGTTGATCTCATTCACAGCT
Shewanella piezotolerans WP3 swp_0358 -77 4.6 TATAGTGATCTCAATCACAGCT
Shewanella sediminis HAW-EB3 Ssed_4166 -78 4 TATAGTGATCTCAATCACTGCT
Shewanella woodyi ATCC 51908 Swoo_0441 -78 3.5 TATAGTGAATTCAATCACTGCT
Position: -167
Score: 4
Sequence: AATGGTGATCATCGTAGCATTT
Locus tag: Sfri_0440
Sfri_0440 -167 4 AATGGTGATCATCGTAGCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemC
Ortholog function: Porphobilinogen deaminase (EC 2.5.1.61)
Shewanella oneidensis MR-1 SO4313 -172 3.9 GATTGTGCTCATGTTAACACTT
-132 4.5 AAATGAGAGGTCCATCACACTT
Shewanella putrefaciens CN-32 Sputcn32_3587 -173 4.1 AAGTGTGCTTATGTTAACACTT
-133 5.2 AAATGAGATCTGCATCACATTT
Shewanella sp W3-18-1 Sputw3181_3726 -173 4.1 AAGTGTGCTTATGTTAACACTT
-133 5.2 AAATGAGATCTGCATCACATTT
Shewanella sp ANA-3 Shewana3_0386 -172 4.2 AAGTGTGCTCATGTTAACACTT
-132 4.3 AAATGAGAAGTTCGTCACACTT
Shewanella sp MR-4 Shewmr4_0388 -172 4.2 AAGTGTGCTCATGTTAACACTT
-132 4.3 AAATGAGAAGTTCGTCACACTT
Shewanella sp MR-7 Shewmr7_3638 -172 4.2 AAGTGTGCTCATGTTAACACTT
-132 4.3 AAATGAGAAGTTCGTCACACTT
Shewanella baltica OS155 Sbal_4000 -132 4.9 AAATGTGAAGTCCGTCACACTT
Shewanella denitrificans OS217 Sden_0388 -85 3.9 AAATCTGCTTTGCTTCAAACAT
Shewanella frigidimarina NCIMB 400 Sfri_0440 -167 4 AATGGTGATCATCGTAGCATTT
Shewanella amazonensis SB2B Sama_3254 -89 5.1 ATTTGCGATAGAGATCACATTT
Shewanella loihica PV-4 Shew_0318 -119 4.7 ATTTGAGAGCTGGATCACACTT
Shewanella pealeana ATCC 700345 Spea_0373 -133 5 AAATGCGATCAAGATCACACTT
Shewanella halifaxensis HAW-EB4 Shal_3917 -133 5.1 AAATGTGATCAACATCACGCTT
Shewanella piezotolerans WP3 swp_0402 -40 4.3 AAATGTAATCCGTATCGCAACA
Shewanella sediminis HAW-EB3 Ssed_4133 -133 4.9 AAATGAGATCAAGATCACACTT
Shewanella woodyi ATCC 51908 Swoo_0483 -229 4.6 AAATGAGACCAAGATCACACTT
Position: -129
Score: 3.8
Sequence: AAATGCTACGATGATCACCATT
Position: -100
Score: 3.9
Sequence: AAATGTGATCTTGATTGGCAAA
Locus tag: Sfri_0441
Sfri_0441 -129 3.8 AAATGCTACGATGATCACCATT
-100 3.9 AAATGTGATCTTGATTGGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyaA
Ortholog function: Adenylate cyclase (EC 4.6.1.1)
Shewanella oneidensis MR-1 SO4312 -91 5 AAGTGTGATGGACCTCTCATTT
Shewanella putrefaciens CN-32 Sputcn32_3586 -91 5.4 AAATGTGATGCAGATCTCATTT
-51 3.8 AAGTGTTAACATAAGCACACTT
Shewanella sp W3-18-1 Sputw3181_3725 -91 5.4 AAATGTGATGCAGATCTCATTT
-51 3.8 AAGTGTTAACATAAGCACACTT
Shewanella sp ANA-3 Shewana3_0387 -92 4.7 AAGTGTGACGAACTTCTCATTT
-52 3.9 AAGTGTTAACATGAGCACACTT
Shewanella sp MR-4 Shewmr4_0389 -92 4.7 AAGTGTGACGAACTTCTCATTT
-52 3.9 AAGTGTTAACATGAGCACACTT
Shewanella sp MR-7 Shewmr7_3637 -92 4.7 AAGTGTGACGAACTTCTCATTT
-52 3.9 AAGTGTTAACATGAGCACACTT
Shewanella frigidimarina NCIMB 400 Sfri_0441 -129 3.8 AAATGCTACGATGATCACCATT
-100 3.9 AAATGTGATCTTGATTGGCAAA
Shewanella amazonensis SB2B Sama_3253 -90 5.4 AAATGTGATCTCTATCGCAAAT
Shewanella loihica PV-4 Shew_0319 -88 5.1 AAGTGTGATCCAGCTCTCAAAT
Shewanella pealeana ATCC 700345 Spea_0374 -87 5.3 AAGTGTGATCTTGATCGCATTT
Shewanella halifaxensis HAW-EB4 Shal_3916 -88 5.3 AAGCGTGATGTTGATCACATTT
Shewanella piezotolerans WP3 swp_0403 -106 5.5 AAATGTGATCGGAGTCACATTT
Shewanella sediminis HAW-EB3 Ssed_4132 -90 5.2 AAGTGTGATCTTGATCTCATTT
Shewanella woodyi ATCC 51908 Swoo_0484 -98 5 AAGTGTGATCTTGGTCTCATTT
Position: -135
Score: 3.8
Sequence: TTGTGTGACCCGCTTCTAACTC
Position: -103
Score: 3.8
Sequence: ATAGGTGAACATTATCACGGTT
Locus tag: Sfri_0456
Sfri_0456 -135 3.8 TTGTGTGACCCGCTTCTAACTC
-103 3.8 ATAGGTGAACATTATCACGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: frdC1
Ortholog function: Fumarate reductase cytochrome b subunit
Shewanella oneidensis MR-1 SO0396 -144 4 TTTTGTGATCATCTTCTAAGAG
-79 3.9 ATTTGTGAGCGATATTAATTTT
Shewanella putrefaciens CN-32 Sputcn32_3441 -144 4.3 TTTTGTGATCTTCTTCTAAGAG
-67 4.1 ATTTGTGAGCGATATTAACTTT
Shewanella sp W3-18-1 Sputw3181_0498 -144 4.3 TTTTGTGATCTTCTTCTAAGAG
-67 4.1 ATTTGTGAGCGATATTAACTTT
Shewanella sp ANA-3 Shewana3_0401 -144 4.2 TTTTGTGATCCTCTTCTAAGAG
-77 3.9 ATTTGTGAGCGATATTAATTTT
Shewanella sp MR-4 Shewmr4_0402 -144 4.2 TTTTGTGATCCTCTTCTAAGAG
-77 3.9 ATTTGTGAGCGATATTAATTTT
Shewanella sp MR-7 Shewmr7_3623 -144 4.2 TTTTGTGATCCTCTTCTAAGAG
-76 3.9 ATTTGTGAGCGATATTAATTTT
Shewanella baltica OS155 Sbal_3937 -145 4.3 TTTTGTGATCTTCTTCTAAGAG
-105 4.1 TCAATTGATCTGGCTCACGTTT
Shewanella frigidimarina NCIMB 400 Sfri_0456 -135 3.8 TTGTGTGACCCGCTTCTAACTC
-103 3.8 ATAGGTGAACATTATCACGGTT
Shewanella frigidimarina NCIMB 400 Sfri_0456 -135 3.8 TTGTGTGACCCGCTTCTAACTC
-103 3.8 ATAGGTGAACATTATCACGGTT
Shewanella amazonensis SB2B Sama_3222 -144 4.1 GTTTGTGATCCGCTTCCAATAA
Shewanella pealeana ATCC 700345 Spea_0392 -138 4.7 ATTTGTGATCTTGATCTAATAG
-106 4 AAGGGTGAGTTCCTTCACGAAA
-94 4.1 TTTGTTGATCTATCTCACGGTT
Shewanella halifaxensis HAW-EB4 Shal_3899 -138 3.9 GTTTGTGATCTACGTCTAATAG
-106 4.2 TGTAGTGACACTGATCACGAAA
-94 4.1 TTTGTTGATCTATCTCACGGTT
Shewanella piezotolerans WP3 swp_0428 -106 3.8 TAGGGTGAGCAAAGTCACGATT
-94 3.9 TTTGTTGATCTATCTCACTGTT
Shewanella sediminis HAW-EB3 Ssed_4116 -126 4.5 GTTTGTGATCTGCTTCAAATAG
Shewanella woodyi ATCC 51908 Swoo_0507 -138 4.8 GTTTGTGATGTGGTTCAAAAAA
Position: -135
Score: 5.2
Sequence: TTTTATGATTTAGATCACAAAA
Locus tag: Sfri_0491
Sfri_0491 -135 5.2 TTTTATGATTTAGATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0439
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO0439 -34 4.4 ATACGTGATCTGACGCACATCA
Shewanella putrefaciens CN-32 Sputcn32_3403 -90 4.5 AAATGTGAACCAGAGCACACTC
Shewanella sp W3-18-1 Sputw3181_0540 -90 4.5 AAATGTGAACCAGAGCACACTC
Shewanella sp ANA-3 Shewana3_0438 -78 4.2 AAGCGTGAGCTAACGCACACAA
Shewanella sp MR-4 Shewmr4_0442 -77 3.8 AAGCGTGAACTTAAGCACACTC
Shewanella sp MR-7 Shewmr7_3587 -77 3.8 AAGCGTGAACTTAAGCACACTC
Shewanella baltica OS155 Sbal_0417 -93 4.8 AAATGTGACCTAAAGCACATAC
Shewanella frigidimarina NCIMB 400 Sfri_0491 -135 5.2 TTTTATGATTTAGATCACAAAA
Shewanella pealeana ATCC 700345 Spea_0430 -137 4.8 TTTTGTGATCTAAGTAGCAAAA
Shewanella halifaxensis HAW-EB4 Shal_0486 -138 4.7 TTTTGTGACATAGGTAACACAA
Shewanella sediminis HAW-EB3 Ssed_3193 -105 4.3 ATTTGTGACCAAGTTCCCAAAC
Shewanella woodyi ATCC 51908 Swoo_0294 -78 3.9 AAACAGGACGTAGATCACACTT
Position: -195
Score: 3.9
Sequence: TATTGTGAAATCACACAGAAAA
Locus tag: Sfri_0493
Sfri_0493 -195 3.9 TATTGTGAAATCACACAGAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: purH
Ortholog function: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Shewanella oneidensis MR-1 SO0442 -180 4.1 TATTGTGAAATCGCGCAGAAAA
Shewanella putrefaciens CN-32 Sputcn32_3401 -193 4 TATTGTGAAATCACGCAGAAAA
Shewanella sp W3-18-1 Sputw3181_0542 -193 4 TATTGTGAAATCACGCAGAAAA
Shewanella sp ANA-3 Shewana3_0441 -181 4.1 TATTGTGAAATCGCGCAGAAAA
Shewanella sp MR-4 Shewmr4_0445 -181 4.1 TATTGTGAAATCGCGCAGAAAA
Shewanella sp MR-7 Shewmr7_3584 -181 4.1 TATTGTGAAATCGCGCAGAAAA
Shewanella baltica OS155 Sbal_0420 -195 4 TATTGTGAAATCACGCAGAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0493 -195 3.9 TATTGTGAAATCACACAGAAAA
Shewanella amazonensis SB2B Sama_0395 -194 4 TATTGTGAAATCACGCAGAAAA
Shewanella loihica PV-4 Shew_3412 -182 4 TATTGTGAAATCGCACAGAAAA
Shewanella pealeana ATCC 700345 Spea_0432 -181 4.1 TATTGTGAAATCGCGCAGAAAA
Shewanella halifaxensis HAW-EB4 Shal_0488 -182 4.1 TATTGTGAAATCGCGCAGAAAA
Shewanella piezotolerans WP3 swp_4724 -181 4.1 TATTGTGAAATCGCGCAGAAAA
Shewanella sediminis HAW-EB3 Ssed_0444 -282 4 GAGTGTGACGCTCTGCACAAAT
-191 4.2 TATTGTGAAATCGTGCAGAAAA
Shewanella woodyi ATCC 51908 Swoo_0296 -192 3.6 TATTGTGAAATCACATATAAAT
Position: -314
Score: 3.6
Sequence: TAACATGAGCTAAAATACATTT
Position: -216
Score: 3.5
Sequence: TAATGTTATTTAATTATACAAA
Position: -145
Score: 4.5
Sequence: TTATTTGATCTAGGCCACACTA
Locus tag: Sfri_0503
Sfri_0503 -314 3.6 TAACATGAGCTAAAATACATTT
-216 3.5 TAATGTTATTTAATTATACAAA
-145 4.5 TTATTTGATCTAGGCCACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp35
Ortholog function: outer membrane porin
Shewanella oneidensis MR-1 SO3896 -67 4.1 AAATGTGTTAAACCACACAAAA
Shewanella sp ANA-3 Shewana3_0733 -67 4.1 AAATGTGTTAAACCACACAAAA
Shewanella sp MR-4 Shewmr4_3228 -67 3.7 AAATGTGTAAAACCACACAAAA
Shewanella sp MR-7 Shewmr7_0761 -67 3.7 AAATGTGTAAAACCACACAAAA
Shewanella baltica OS155 Sbal_3570 -67 3.6 AAATGCGTTAAACCACACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0503 -145 4.5 TTATTTGATCTAGGCCACACTA
Shewanella loihica PV-4 Shew_3260 -150 4.1 AAATTTGATCTGCGCCACACTC
Shewanella pealeana ATCC 700345 Spea_0589 -150 4.4 AAACATGATCTAGTCCACAATT
Shewanella halifaxensis HAW-EB4 Shal_0676 -150 4.4 AAACATGATCTAGTCCACAATT
Shewanella piezotolerans WP3 swp_4514 -150 4.1 AAACTTGATCTAGCCCACAATC
Shewanella sediminis HAW-EB3 Ssed_4009 -151 4.4 AAACATGATCTAGTCCACAATT
Shewanella woodyi ATCC 51908 Swoo_4152 -241 3.3 AATTATTAACTCTTTCTTAAAT
Shewanella woodyi ATCC 51908 Swoo_4151 -149 4.3 AAGTTTGATCTAGTCCACAATC
Position: -251
Score: 4
Sequence: TATCTTGATGAGTTTAACCAAT
Locus tag: Sfri_0504
Sfri_0504 -251 4 TATCTTGATGAGTTTAACCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3895
Ortholog function: HesA/MoeB/ThiF family protein related to EC-YgdL
Shewanella putrefaciens CN-32 Sputcn32_0780 -317 4.9 AAATGCGATATAGATCACAAAC
Shewanella sp W3-18-1 Sputw3181_3395 -317 4.9 AAATGCGATATAGATCACAAAC
Shewanella sp ANA-3 Shewana3_0735 -308 4.5 AAATGTGATCTTGATCACTTGA
Shewanella sp MR-4 Shewmr4_3226 -309 3.9 AAATGTGATCTGGATCATTGGA
Shewanella sp MR-7 Shewmr7_0763 -309 3.9 AAATGTGATCTGGATCATTGGA
Shewanella baltica OS155 Sbal_3568 -321 5 AAGTGTGATCTGGATCAAGTTT
Shewanella frigidimarina NCIMB 400 Sfri_0504 -251 4 TATCTTGATGAGTTTAACCAAT
Shewanella amazonensis SB2B Sama_0546 -214 4.8 AAGTGTGATCACTATCACATCA
Shewanella loihica PV-4 Shew_3251 -226 4.6 AGGTGTGATCCGTGTCGCAAAT
-196 3.8 TTACGTGAGTTTTATCATGTTG
Shewanella pealeana ATCC 700345 Spea_0591 -259 4.3 ATGTGTGACGCTTGTCACGGTT
Shewanella halifaxensis HAW-EB4 Shal_0678 -253 4.8 GTTTGTGATGTCTATCACGTTT
Shewanella piezotolerans WP3 swp_4512 -245 3.8 CGATGTGATCTTGATCTGGTTT
-215 3.9 ATGTGTGATATTAATCATAGGT
Shewanella sediminis HAW-EB3 Ssed_4007 -324 5 TTTTGTGATTCTTATCACGCAT
-294 4.6 TTGTGTGATATCAATCATCTTT
-200 3.8 TTTTGTGAACTTGATTAACAAG
Shewanella woodyi ATCC 51908 Swoo_4150 -290 5.1 CTTTGTGATATCAATCACAATA
Position: -129
Score: 4.2
Sequence: TTTTGTGAGCTAATTGGCAATT
Locus tag: Sfri_0507
Sfri_0507 -129 4.2 TTTTGTGAGCTAATTGGCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sputcn32_0777
Ortholog function: hypothetical protein
Shewanella putrefaciens CN-32 Sputcn32_0777 -140 4.5 AAACTTGATTCGTGTCACACAA
Shewanella sp W3-18-1 Sputw3181_3398 -140 4.5 AAACTTGATTCGTGTCACACAA
Shewanella sp ANA-3 Shewana3_0738 -140 4.4 AAATTTGAACCACATCACACAG
Shewanella frigidimarina NCIMB 400 Sfri_0507 -129 4.2 TTTTGTGAGCTAATTGGCAATT
Shewanella amazonensis SB2B Sama_0549 -139 4.3 AAAGTTGATTCACATCAAATTA
Shewanella halifaxensis HAW-EB4 Shal_0680 -79 3.9 GTTTTTGACTAAGATCAAAAAA
Shewanella piezotolerans WP3 swp_4510 -64 4.1 AAACGTGATCAACAGCATCTTT
Shewanella woodyi ATCC 51908 Swoo_4146 -81 3.9 TTTATTGATCGAGATCAGCTTA
Position: -167
Score: 3.7
Sequence: AAATGTTAAAAAATTAATATAA
Locus tag: Sfri_0534
Sfri_0534 -167 3.7 AAATGTTAAAAAATTAATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3987
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO3987 -83 3.9 TCTTGTGAGCGAGTTCACGCCT
Shewanella putrefaciens CN-32 Sputcn32_0679 -83 4 TCTTGTGAGCCAGTTCACGCCT
Shewanella sp W3-18-1 Sputw3181_3492 -83 4 TCTTGTGAGCCAGTTCACGCCT
Shewanella sp ANA-3 Shewana3_0651 -83 4 TCTTGTGAGCCAGTTCACGCCT
Shewanella sp MR-4 Shewmr4_0652 -83 4.1 TCTTGTGACCTAGTTCACGCCT
Shewanella sp MR-7 Shewmr7_3370 -83 4.1 TCTTGTGACCTAGTTCACGCCT
Shewanella baltica OS155 Sbal_0787 -277 3.7 TAAAGCGATATATGTAACAAAC
Shewanella amazonensis SB2B Sama_0602 -307 4.1 AAATTGAATATGGATCACATTT
Shewanella loihica PV-4 Shew_0778 -147 5.1 AGATTTGATGTAAATCACATTT
-82 4.4 TAAAGTGACCTGTCTCACACCT
Shewanella pealeana ATCC 700345 Spea_0734 -147 4.1 CGATATGATTTGGATCACTTTT
-82 4.2 AATAGTGATATACATCACAAGG
Shewanella halifaxensis HAW-EB4 Shal_0787 -81 4.9 AATAGTGATGCAGATCACACTG
Shewanella piezotolerans WP3 swp_4346 -4 4.6 TACTGTGATCGATATCACGTCT
Shewanella sediminis HAW-EB3 Ssed_0816 -321 3.9 AAACTCAATATAGTTCACATTT
-147 3.9 GGATATGATCTAAATCACACTG
Shewanella woodyi ATCC 51908 Swoo_3763 -82 4.3 TTGTGTGACCTGCATCACGCCA
Position: -166
Score: 4.2
Sequence: AAATGAGATTTACATCACGCTG
Position: -142
Score: 4.3
Sequence: AAATGTGACCTTGCACAACTAT
Locus tag: Sfri_0553
Sfri_0553 -166 4.2 AAATGAGATTTACATCACGCTG
-142 4.3 AAATGTGACCTTGCACAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: napA
Ortholog function: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Shewanella oneidensis MR-1 SO0848 -260 3.9 TAATGTGATTGGTATAAACCTC
-150 3.9 AACTTTGATCCCGATCGACTAT
Shewanella putrefaciens CN-32 Sputcn32_3148 -147 3.9 AACTTTGATCCCGATCGACTAT
Shewanella sp W3-18-1 Sputw3181_0795 -147 3.9 AACTTTGATCCCGATCGACTAT
Shewanella sp ANA-3 Shewana3_3430 -149 3.9 AACTTTGATCCCGATCGACTAT
Shewanella sp MR-4 Shewmr4_0704 -149 3.9 AACTTTGATCCCGATCGACTAT
Shewanella sp MR-7 Shewmr7_3318 -149 3.9 AACTTTGATCCCGATCGACTAT
Shewanella baltica OS155 Sbal_3511 -150 4 AACTTTGATCCGGATCGACTAT
Shewanella frigidimarina NCIMB 400 Sfri_0553 -166 4.2 AAATGAGATTTACATCACGCTG
-142 4.3 AAATGTGACCTTGCACAACTAT
Shewanella loihica PV-4 Shew_3206 -154 3.8 AACTTTGATCTCGATCTACAAA
Shewanella pealeana ATCC 700345 Spea_0623 -173 4.3 ATTTGTGAACTAGATCAACACT
Shewanella halifaxensis HAW-EB4 Shal_0715 -174 4.2 ATCTGTGAATCAGATCACCATG
Shewanella sediminis HAW-EB3 Ssed_3957 -187 4.1 ATCTGAGACATAGGTCACACAT
Shewanella woodyi ATCC 51908 Swoo_4110 -179 4.4 AAATGTGAACTCCATCACGCAC
-155 3.9 AATATTGATCTTGATCGACTAA
Position: -172
Score: 3.8
Sequence: TTCAGTGAACAAAATCAAACAA
Position: -131
Score: 4.1
Sequence: TTGAGTGTCCAAGTTCACATTT
Locus tag: Sfri_0568
Sfri_0568 -172 3.8 TTCAGTGAACAAAATCAAACAA
-131 4.1 TTGAGTGTCCAAGTTCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3774
Ortholog function: proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Shewanella oneidensis MR-1 SO3774 -146 4.4 TATAGTGTTGTCCGTCACATTT
Shewanella putrefaciens CN-32 Sputcn32_3099 -128 3.8 GATAGTGTTGTCCGTCACATTT
Shewanella sp W3-18-1 Sputw3181_0845 -128 3.8 GATAGTGTTGTCCGTCACATTT
Shewanella sp ANA-3 Shewana3_0819 -131 4.4 TATAGTGTTGTCCGTCACATTT
Shewanella sp MR-4 Shewmr4_3122 -132 4.4 TATAGTGTTGTCCGTCACATTT
Shewanella sp MR-7 Shewmr7_0850 -131 4.4 TATAGTGTTGTCCGTCACATTT
Shewanella baltica OS155 Sbal_3458 -128 4.4 TATAGTGTTGTCCGTCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_0568 -172 3.8 TTCAGTGAACAAAATCAAACAA
-131 4.1 TTGAGTGTCCAAGTTCACATTT
Shewanella loihica PV-4 Shew_0615 -146 3.9 AAGAGTGTCCCTCGTCACATTT
Shewanella pealeana ATCC 700345 Spea_3490 -127 3.9 ATTATTGCCACTCATCACATTT
Shewanella piezotolerans WP3 swp_0809 -137 3.9 AAAGGTGTCGCTCGTCACATTT
Shewanella sediminis HAW-EB3 Ssed_3846 -162 4 AATGGTGTCCCTCGTCACATTT
Shewanella woodyi ATCC 51908 Swoo_0714 -176 3.9 AAGAGTGTCCCTCGTCACATTT
Position: -127
Score: 3.6
Sequence: TTTTGTGCAGTCCGGCACACAC
Locus tag: Sfri_0576
Sfri_0576 -127 3.6 TTTTGTGCAGTCCGGCACACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3682
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO3682 -109 3.8 TTGCGTGATTTTGTGCAAGCAT
Shewanella putrefaciens CN-32 Sputcn32_2981 -76 3.8 ATTTTTGAGCAAGATCACGGCT
Shewanella sp W3-18-1 Sputw3181_0966 -76 3.8 ATTTTTGAGCAAGATCACGGCT
Shewanella sp MR-4 Shewmr4_0873 -166 3.7 TGACGTGATTTGTGGCGTATAA
Shewanella sp MR-7 Shewmr7_3149 -166 3.7 TGACGTGATTTGTGGCGTATAA
Shewanella baltica OS155 Sbal_3331 -76 3.7 ATTTTTGAGCAATATCACGGCT
Shewanella amazonensis SB2B Sama_2854 -78 4 AAACTTGATCTGGATCACGAGT
Shewanella loihica PV-4 Shew_3102 -84 4.2 AAATGTGATCTGGATCAAGTGG
Shewanella pealeana ATCC 700345 Spea_3356 -102 4.7 AATTGTGAGCTAGATCAAACTC
Shewanella halifaxensis HAW-EB4 Shal_3428 -90 4.8 AATTGTGACTGAGATCAAATTC
Shewanella piezotolerans WP3 swp_1054 -79 4.3 TTTTGTGAGCAAGATCAACTTC
Shewanella sediminis HAW-EB3 Ssed_3715 -111 4.2 CAGTGTGATCTCGATCAACTTC
Position: -115
Score: 3.7
Sequence: TTAATTGATTACGATCAATTTA
Position: -50
Score: 3.6
Sequence: ATTTTTAATTCATAAAACAATA
Locus tag: Sfri_0616
Sfri_0616 -115 3.7 TTAATTGATTACGATCAATTTA
-50 3.6 ATTTTTAATTCATAAAACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sputcn32_0312
Ortholog function: hypothetical protein
Shewanella putrefaciens CN-32 Sputcn32_0312 -99 4.3 AAGTGTGATGCTGGTCAATAAA
Shewanella sp W3-18-1 Sputw3181_3896 -99 4.2 AAGTGTGATACTGGTCAATAAA
Shewanella sp ANA-3 Shewana3_3963 -99 5.2 AAATGTGATCTATGTCAAAAAA
Shewanella sp MR-4 Shewmr4_3765 -99 5.2 AAATGTGATCTATGTCAAAAAA
Shewanella sp MR-7 Shewmr7_3838 -99 5.2 AAATGTGATCTGTGTCAAAAAA
Shewanella baltica OS155 Sbal_0180 -97 5.2 AAATGTGATCGTGTTCAAAAAA
Shewanella frigidimarina NCIMB 400 Sfri_0616 -115 3.7 TTAATTGATTACGATCAATTTA
Position: -140
Score: 3.9
Sequence: AAACAGGATGTATCTCACAGTT
Locus tag: Sfri_0621
Sfri_0621 -140 3.9 AAACAGGATGTATCTCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: narQ
Ortholog function: Nitrate/nitrite sensor protein (EC 2.7.3.-)
Shewanella oneidensis MR-1 SO3981 -174 3.7 AAGTTTGCGCTAGATCAAAATG
-151 4.5 AATAGTGTTGTTGTTCACACTT
Shewanella putrefaciens CN-32 Sputcn32_0684 -114 4.5 AATAGTGTTGTTGTTCACACTT
Shewanella sp W3-18-1 Sputw3181_3487 -114 4.5 AATAGTGTTGTTGTTCACACTT
Shewanella sp ANA-3 Shewana3_0657 -138 3.7 AAGTTTGCGCTAGATCAAAATG
-115 4.5 AATAGTGTTGTTGTTCACACTT
Shewanella sp MR-4 Shewmr4_0658 -139 3.7 AAGTTTGCGCTAGATCAAAATG
-116 4.5 AATAGTGTTGTTGTTCACACTT
Shewanella sp MR-7 Shewmr7_3364 -139 3.7 AAGTTTGCGCTAGATCAAAATG
-116 4.5 AATAGTGTTGTTGTTCACACTT
Shewanella baltica OS155 Sbal_0793 -121 3.7 AAGTTTGCGCTAGATCAAAATG
-98 4.5 AAAGGTGTTGTTGTTCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_0621 -140 3.9 AAACAGGATGTATCTCACAGTT
Shewanella amazonensis SB2B Sama_0647 -112 4 GGATGTGTTATTGTTCACACTT
Shewanella loihica PV-4 Shew_0843 -136 3.9 AAACTTGAGGCAGATCATAATG
-113 4.4 GAATGTGTTGTTGGTCACATTT
Shewanella pealeana ATCC 700345 Spea_0830 -109 4 GAACGTGTTGTTGCTCACACTT
-81 3.8 ATTTGTTAATGTAATCAAGTAT
Shewanella halifaxensis HAW-EB4 Shal_0885 -111 4.3 GAATGTGTTGTTGCTCACACTT
Shewanella sediminis HAW-EB3 Ssed_0930 -113 4.8 AAATGTGGTGTTGCTCACACTT
Shewanella woodyi ATCC 51908 Swoo_0971 -112 4.8 AAACGTGTTGTTGCTCACATTT
Position: -146
Score: 4.1
Sequence: ATAGTTGATTCAGAACACATTA
Locus tag: Sfri_0688
Sfri_0688 -146 4.1 ATAGTTGATTCAGAACACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0919
Ortholog function: Serine transporter, putative
Shewanella baltica OS155 Sbal_0765 -280 4.1 TTTTGTGATCTAGATCCAATCC
-139 4 ATCAGCGATCTAGATCTCAATA
Shewanella frigidimarina NCIMB 400 Sfri_0688 -146 4.1 ATAGTTGATTCAGAACACATTA
Shewanella pealeana ATCC 700345 Spea_0771 -161 4.2 TTAAGAGATCTAGCTCTCAATT
Shewanella halifaxensis HAW-EB4 Shal_0823 -160 4.3 TTAAGCGATCTAGCTCTCAATT
Position: -144
Score: 4
Sequence: TTTTGCGCGGCAGTTCACATTG
Position: -83
Score: 4.4
Sequence: TGACGTGATCTGTTTCATGTAA
Locus tag: Sfri_0813
Sfri_0813 -144 4 TTTTGCGCGGCAGTTCACATTG
-83 4.4 TGACGTGATCTGTTTCATGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemG
Ortholog function: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Shewanella putrefaciens CN-32 Sputcn32_3038 -207 4.5 TTTTGTGAGCAAGCTAAAATTA
-135 3.9 AATTGATATTTAAATCACCTAG
Shewanella sp W3-18-1 Sputw3181_0907 -207 4.5 TTTTGTGAGCAAGCTAAAATTA
-135 3.9 AATTGATATTTAAATCACCTAG
Shewanella sp ANA-3 Shewana3_0871 -317 4.1 TTTTGTGAGCAAGCTAGAATTA
Shewanella sp MR-4 Shewmr4_3066 -320 4.1 TTTTGTGAGCAAGCTAGAATTA
Shewanella sp MR-7 Shewmr7_0906 -318 4.1 TTTTGTGAGCAAGCTAGAATTA
Shewanella baltica OS155 Sbal_3400 -316 4.4 TTTTGTGAGACAGTTAAAACTA
Shewanella frigidimarina NCIMB 400 Sfri_0813 -144 4 TTTTGCGCGGCAGTTCACATTG
-83 4.4 TGACGTGATCTGTTTCATGTAA
Shewanella amazonensis SB2B Sama_2882 -130 3.9 AAATGTGAGGCAGTTGGAATTT
Shewanella loihica PV-4 Shew_0678 -126 4.1 ATTTGTGACATCGGTAAACTTA
Shewanella pealeana ATCC 700345 Spea_0673 -140 4 TTTTGTGAGGTAGGTAAAGCTA
-98 3.8 CCTCGTGATCTGTTTCATGTAA
Shewanella halifaxensis HAW-EB4 Shal_3525 -139 4 TTTTGTGAGGTAGGTAAAGCTA
-97 3.8 CCTCGTGATCTGTTTCATGTAA
Shewanella piezotolerans WP3 swp_4046 -124 3.9 TTTTGTGAGGTAGGTAAAGGTA
-77 3.7 TGATCTGATTCAATTAAAAATA
Shewanella sediminis HAW-EB3 Ssed_3790 -120 4.9 ATTTGTGATGCAGGTAAAATTT
-78 4 TGCCGTGATCTGTTTCATGTAA
Shewanella woodyi ATCC 51908 Swoo_0793 -123 4.3 AATTGTGATATAGGTAAGAGTA
Position: -122
Score: 5
Sequence: TAATGTGATTTTACTCACTTAA
Locus tag: Sfri_0833
Sfri_0833 -122 5 TAATGTGATTTTACTCACTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfcA
Ortholog function: NAD-dependent malic enzyme (EC 1.1.1.38)
Shewanella oneidensis MR-1 SO3855 -66 4 TTACGTGACCTATAGCACGTCT
Shewanella putrefaciens CN-32 Sputcn32_0784 -54 4.4 TTACGTGACTTAAAGCACGTAT
Shewanella sp W3-18-1 Sputw3181_3391 -54 4.4 TTACGTGACTTAAAGCACGTAT
Shewanella sp ANA-3 Shewana3_0750 -65 3.9 TTACGTGACTTACAGCACGTCT
Shewanella sp MR-4 Shewmr4_3188 -66 3.9 TTACGTGACTTACAGCACGTCT
Shewanella sp MR-7 Shewmr7_0778 -66 3.9 TTACGTGACTTACAGCACGTCT
Shewanella baltica OS155 Sbal_0676 -55 4.4 TTACGTGACTTACAGCACGTAT
Shewanella frigidimarina NCIMB 400 Sfri_0833 -122 5 TAATGTGATTTTACTCACTTAA
Shewanella sediminis HAW-EB3 Ssed_3518 -87 3.7 AAACGCAACAAAGATCACACTT
Position: -146
Score: 3.9
Sequence: CTTAGTGATCAAAATCAAATCA
Locus tag: Sfri_0937
Sfri_0937 -146 3.9 CTTAGTGATCAAAATCAAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3683
Ortholog function: aldehyde dehydrogenase (EC 1.2.1.3); probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Shewanella putrefaciens CN-32 Sputcn32_2982 -168 4.3 AGCCGTGATCTTGCTCAAAAAT
Shewanella sp W3-18-1 Sputw3181_0965 -168 4.3 AGCCGTGATCTTGCTCAAAAAT
Shewanella baltica OS155 Sbal_3332 -189 4.2 AGCCGTGATATTGCTCAAAAAT
Shewanella frigidimarina NCIMB 400 Sfri_0937 -146 3.9 CTTAGTGATCAAAATCAAATCA
Shewanella amazonensis SB2B Sama_2855 -106 4.4 ACTCGTGATCCAGATCAAGTTT
Shewanella loihica PV-4 Shew_3103 -201 4.2 CCACTTGATCCAGATCACATTT
Shewanella pealeana ATCC 700345 Spea_3357 -113 4.6 GAGTTTGATCTAGCTCACAATT
Shewanella halifaxensis HAW-EB4 Shal_3429 -113 4.4 GAATTTGATCTCAGTCACAATT
Shewanella piezotolerans WP3 swp_1052 -113 4 GAAGTTGATCTTGCTCACAAAA
Position: -133
Score: 4.1
Sequence: TGATTTGATTTTGATCACTAAG
Locus tag: Sfri_0938
Sfri_0938 -133 4.1 TGATTTGATTTTGATCACTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3681
Ortholog function: universal stress protein family
Shewanella oneidensis MR-1 SO3681 -109 3.8 TTGCGTGATTTTGTGCAAGCAT
Shewanella putrefaciens CN-32 Sputcn32_2980 -76 3.8 ATTTTTGAGCAAGATCACGGCT
Shewanella sp W3-18-1 Sputw3181_0967 -76 3.8 ATTTTTGAGCAAGATCACGGCT
Shewanella frigidimarina NCIMB 400 Sfri_0938 -133 4.1 TGATTTGATTTTGATCACTAAG
Shewanella amazonensis SB2B Sama_2853 -78 4 AAACTTGATCTGGATCACGAGT
Shewanella piezotolerans WP3 swp_1055 -79 4.3 TTTTGTGAGCAAGATCAACTTC
Position: -127
Score: 4.3
Sequence: CAGCGTGATTATGATCGCATTT
Locus tag: Sfri_0949
Sfri_0949 -127 4.3 CAGCGTGATTATGATCGCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nqrA-2
Ortholog function: Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)
Shewanella oneidensis MR-1 SO1103 -129 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella putrefaciens CN-32 Sputcn32_0940 -129 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella sp W3-18-1 Sputw3181_3236 -129 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella sp ANA-3 Shewana3_0938 -129 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella sp MR-4 Shewmr4_0936 -129 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella sp MR-7 Shewmr7_0974 -129 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella baltica OS155 Sbal_0924 -128 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella denitrificans OS217 Sden_0982 -128 4.3 CAGCGTGATTGCGATCGCATTA
Shewanella frigidimarina NCIMB 400 Sfri_0949 -127 4.3 CAGCGTGATTATGATCGCATTT
Shewanella amazonensis SB2B Sama_2539 -127 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella loihica PV-4 Shew_2881 -131 4.3 CAGCGTGATTGCGATCGCATTT
-73 4.1 ATGTTTGAAATCTATCTCATTT
Shewanella pealeana ATCC 700345 Spea_3103 -133 4.4 CAGCGTGATTCTGATCGCATTT
Shewanella halifaxensis HAW-EB4 Shal_3187 -127 3.7 CAGCGTGATTACAGTCGCACTT
Shewanella piezotolerans WP3 swp_1167 -132 4.3 CAGCGTGATTGCGATCGCATTT
Shewanella sediminis HAW-EB3 Ssed_3431 -130 4.1 CAGCGTGATTGCGGTCGCATTT
Shewanella woodyi ATCC 51908 Swoo_3617 -46 4 CAGCGTGATTGCGGTCGCAAAT
Position: -141
Score: 4.5
Sequence: TTTTGTGAATTAAAGCAAATAA
Locus tag: Sfri_0964
Sfri_0964 -141 4.5 TTTTGTGAATTAAAGCAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spea_3089
Ortholog function: hypothetical protein
Shewanella putrefaciens CN-32 Sputcn32_0956 -213 4.6 TTATGTGAAGCAGATCGCCATT
Shewanella sp W3-18-1 Sputw3181_3220 -213 4.6 TTATGTGAAGCAGATCGCCATT
Shewanella baltica OS155 Sbal_0942 -213 4.6 TTATGTGAAGCAGATCGCCATT
Shewanella frigidimarina NCIMB 400 Sfri_0964 -141 4.5 TTTTGTGAATTAAAGCAAATAA
Shewanella pealeana ATCC 700345 Spea_3089 -256 4.3 TTTTGCGATTCAGATCACTTTG
Shewanella halifaxensis HAW-EB4 Shal_3174 -268 4.5 TTCCGTGATCAATATCACCTTA
-40 3.7 ATTTGAGATTCTATTTACAACT
Shewanella sediminis HAW-EB3 Ssed_3418 -227 3.8 TTTTGTACTGTTTTTAAAATAA
Shewanella sediminis HAW-EB3 Ssed_3419 -227 3.9 ATTTCAGATATAAATCAAAAAA
Position: -146
Score: 4.2
Sequence: AGTCGCGACATTGTTCACAAAA
Locus tag: Sfri_1001
Sfri_1001 -146 4.2 AGTCGCGACATTGTTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tsx
Ortholog function: nucleoside-specific channel-forming protein, Tsx
Shewanella putrefaciens CN-32 Sputcn32_2823 -268 3.8 AATAGTGATTTCTGTCGTGAAT
Shewanella sp W3-18-1 Sputw3181_1188 -268 3.8 AATAGTGATTTCTGTCGTGAAT
Shewanella sp ANA-3 Shewana3_1040 -144 4.2 AGTCGCGACTTTGTTCACAATT
Shewanella sp MR-4 Shewmr4_1036 -144 4.2 AGTCGCGACTTTGTTCACAATT
Shewanella sp MR-7 Shewmr7_1101 -144 4.2 AGTCGCGACTTTGTTCACAATT
Shewanella baltica OS155 Sbal_3228 -145 4.2 AGTCGCGACTTTGTTCACAATT
Shewanella denitrificans OS217 Sden_1024 -145 4 AGTCACGATATTGTTCACATAT
Shewanella frigidimarina NCIMB 400 Sfri_1001 -146 4.2 AGTCGCGACATTGTTCACAAAA
Shewanella loihica PV-4 Shew_2816 -99 4 TATTGTGATTTAATACAATTTG
Shewanella sediminis HAW-EB3 Ssed_3379 -245 3.9 CTGTGTGAGGATAAACACAATT
Shewanella woodyi ATCC 51908 Swoo_3550 -103 3.7 TGTTGTGCTTTAGCACAGAATA
Position: -342
Score: 3.8
Sequence: ATTTATGATTGTGATCAACCTG
Position: -240
Score: 4.2
Sequence: AAATCTAATGCTGGTCACATAA
Locus tag: Sfri_1142
Sfri_1142 -342 3.8 ATTTATGATTGTGATCAACCTG
-240 4.2 AAATCTAATGCTGGTCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cydA
Ortholog function: cytochrome d ubiquinol oxidase, subunit I, CydA
Shewanella oneidensis MR-1 SO3286 -203 4.2 TAGTGTGACTAGGGTCTCAGTA
Shewanella putrefaciens CN-32 Sputcn32_2641 -204 4.3 TAGTGTGACGCTTGTCCCAATA
Shewanella sp W3-18-1 Sputw3181_1366 -204 4.3 TAGTGTGACGCTTGTCCCAATA
Shewanella sp ANA-3 Shewana3_1241 -203 4.2 TAGTGTGACTAGGGTCTCAGTA
Shewanella sp MR-4 Shewmr4_1239 -203 4.2 TAGTGTGACTAGGGTCTCAGTA
Shewanella sp MR-7 Shewmr7_1310 -203 4.2 TAGTGTGACTAGGGTCTCAGTA
Shewanella baltica OS155 Sbal_2979 -207 4.4 TAGTGTGACTCGCGTCTCAATA
Shewanella denitrificans OS217 Sden_1274 -157 4.1 TAAATTGATCTAAATCAATTTA
Shewanella frigidimarina NCIMB 400 Sfri_1142 -240 4.2 AAATCTAATGCTGGTCACATAA
Shewanella loihica PV-4 Shew_1302 -206 4.7 TTTTGTGAGCCGCCTCTCAAAA
Shewanella pealeana ATCC 700345 Spea_1318 -235 4 ATTCGGGATGGGTGTCACAAAG
Shewanella halifaxensis HAW-EB4 Shal_1381 -234 4.1 ATTTGGGATGAGTATCACGGAA
Shewanella piezotolerans WP3 swp_1469 -231 4.2 AGGTGAGACGGTGATCACAATA
Shewanella sediminis HAW-EB3 Ssed_3118 -203 4 TAGTGTGAAGTTCGTCGTAAAA
Shewanella woodyi ATCC 51908 Swoo_1565 -204 3.8 TTTTGTGAGATCGGTCGGAAAG
Position: -300
Score: 4.4
Sequence: TTTTGTTAACTCCCTCACAGTT
Locus tag: Sfri_1327
Sfri_1327 -300 4.4 TTTTGTTAACTCCCTCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galE
Ortholog function: UDP-glucose 4-epimerase (EC 5.1.3.2)
Shewanella amazonensis SB2B Sama_2224 -304 4.5 TTTTGTTAACTGCCTCACGTTT
Position: -74
Score: 4.5
Sequence: AACTGTGAGGGAGTTAACAAAA
Locus tag: Sfri_1328
Sfri_1328 -74 4.5 AACTGTGAGGGAGTTAACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: phhA
Ortholog function: Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Shewanella oneidensis MR-1 SO1666 -75 4.5 AACTGTGAGGGAGTTAACAAAA
Shewanella putrefaciens CN-32 Sputcn32_1386 -75 4.7 AAGTGTGAGGGAGTTAACAAAA
Shewanella sp W3-18-1 Sputw3181_2715 -75 4.7 AAGTGTGAGGGAGTTAACAAAA
Shewanella sp ANA-3 Shewana3_2781 -75 4.5 AACTGTGAGGGAGTTAACAAAA
Shewanella sp MR-4 Shewmr4_2607 -75 4.5 AACTGTGAGGGAGTTAACAAAA
Shewanella sp MR-7 Shewmr7_2674 -75 4.5 AACTGTGAGGGAGTTAACAAAA
Shewanella baltica OS155 Sbal_1484 -75 4.7 AAGTGTGAGGGAGTTAACAAAT
Shewanella denitrificans OS217 Sden_2595 -61 4.1 AATTGTGCGCCATGGCACACTA
Shewanella frigidimarina NCIMB 400 Sfri_1328 -74 4.5 AACTGTGAGGGAGTTAACAAAA
Shewanella amazonensis SB2B Sama_2222 -76 4.6 AAACGTGAGGCAGTTAACAAAA
Shewanella loihica PV-4 Shew_1435 -40 4.7 AAGTGTGATCCTGTTAACAAAC
Shewanella pealeana ATCC 700345 Spea_1448 -126 4.9 AACTGTGATCGGGTTAACAATT
Shewanella halifaxensis HAW-EB4 Shal_1531 -86 4.7 AACCGTGATCTAGTTAACAAAA
Shewanella piezotolerans WP3 swp_1650 -76 5 AACTGTGATCTGGTTAACAAAA
Shewanella sediminis HAW-EB3 Ssed_2930 -75 4.8 AACTGTGATGGAGTTAACAAAA
Shewanella woodyi ATCC 51908 Swoo_1715 -74 4.7 AAGTGTGAAGTGGTTAACAAAA
Position: -116
Score: 4.1
Sequence: AAATGTGATTTGGTACTTACTA
Locus tag: Sfri_1331
Sfri_1331 -116 4.1 AAATGTGATTTGGTACTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fahA
Ortholog function: Fumarylacetoacetate hydrolase family protein
Shewanella oneidensis MR-1 SO1670 -200 5.1 AAATGTGATTTTGTTCACGCTA
Shewanella putrefaciens CN-32 Sputcn32_1389 -229 5 AAATGTGATTTGTGTCACGCTA
Shewanella sp W3-18-1 Sputw3181_2712 -229 5 AAATGTGATTTGTGTCACGCTA
Shewanella sp ANA-3 Shewana3_2778 -197 5.1 AAATGTGATTTTGCTCACGCTA
Shewanella sp MR-4 Shewmr4_2604 -196 5.1 AAATGTGATTTTGCTCACGCTA
Shewanella sp MR-7 Shewmr7_2671 -196 5.1 AAATGTGATTTTGCTCACGCTA
Shewanella baltica OS155 Sbal_1487 -235 5 AAATGTGATTTTGGTCACGCTA
Shewanella denitrificans OS217 Sden_2592 -107 4.7 AAATGTGATTTTGCGCACGCTA
Shewanella frigidimarina NCIMB 400 Sfri_1331 -116 4.1 AAATGTGATTTGGTACTTACTA
Shewanella amazonensis SB2B Sama_2219 -111 5 AATTGTGATTTGAGTCACGCTA
Shewanella loihica PV-4 Shew_1438 -130 4.4 GAGTGTGATTTGTATCACGCTA
Shewanella pealeana ATCC 700345 Spea_1451 -158 5.3 AAGTGTGATTTCGTTCACACTA
Shewanella halifaxensis HAW-EB4 Shal_1534 -144 4.5 CAGTGTGATTTATCTCACGCTA
Shewanella piezotolerans WP3 swp_1653 -140 5 TAGTGTGATTTAGCTCACGCTA
Shewanella sediminis HAW-EB3 Ssed_2927 -116 4.1 GAGCGTGATTCATGTCACACTA
Shewanella woodyi ATCC 51908 Swoo_1718 -133 5 TATTGTGATTTGTGTCACGCTA
Position: -232
Score: 3.9
Sequence: TCGCTTGATCAACCTCACAAAA
Position: -170
Score: 3.9
Sequence: TTTTGTGATCCAAATCAACAGC
Locus tag: Sfri_1334
Sfri_1334 -232 3.9 TCGCTTGATCAACCTCACAAAA
-170 3.9 TTTTGTGATCCAAATCAACAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: outer membrane protein W precursor
Shewanella oneidensis MR-1 SO1673 -161 4.4 TAGCGTGATTTGGATCTCAATG
-110 4.4 AATTTTGATTTGGATCAATAAT
Shewanella putrefaciens CN-32 Sputcn32_1392 -211 4.2 ATAAATGCTGCGTATCACATAA
-158 4 TTTCGTGATTAGGATCTCAAGT
Shewanella sp W3-18-1 Sputw3181_2709 -211 4.2 ATAAATGCTGCGTATCACATAA
Shewanella sp ANA-3 Shewana3_2775 -107 3.8 AATCTTGATTTGGATCAATAAG
Shewanella baltica OS155 Sbal_1490 -158 4 TTTCGTGATTCAGCTCCCATGT
Shewanella denitrificans OS217 Sden_2589 -157 4.2 TTTTGTGAATTAGATCAAGACT
Shewanella frigidimarina NCIMB 400 Sfri_1334 -232 3.9 TCGCTTGATCAACCTCACAAAA
-170 3.9 TTTTGTGATCCAAATCAACAGC
Shewanella amazonensis SB2B Sama_1371 -56 4 AATTGTTACGGACGTAACAGAA
Shewanella pealeana ATCC 700345 Spea_2787 -159 4.4 TATTGTGATCTAGATCCTTTTA
Shewanella halifaxensis HAW-EB4 Shal_2887 -161 5.1 AAATGTGATCTTCATCGCCTTT
-111 4.8 ATTTTTGATTCAGGTCAAATTT
Shewanella piezotolerans WP3 swp_3395 -214 4 TTGCGTGTTGTATGTCACCAAA
-161 4.4 AAATGTGATCGCGATCACTGCT
Shewanella sediminis HAW-EB3 Ssed_1469 -158 4.5 TTTTGTGAGCTTGGTCATGTAT
-108 3.7 TTAATTGATCTGGATCAATAAG
Shewanella woodyi ATCC 51908 Swoo_3207 -211 4.3 AATTATGACGTCGCTCACTAAA
-158 4.5 AAGTGTGAGTTCGATCAAGTAT
-108 3.9 TTTATTGATTTGGATCAATAAA
Position: -328
Score: 3.5
Sequence: AATGGTGACCCACCAAGCAATT
Position: -191
Score: 3.5
Sequence: TTAAATAATAAGTTTCAAATAT
Locus tag: Sfri_1454
Sfri_1454 -328 3.5 AATGGTGACCCACCAAGCAATT
-191 3.5 TTAAATAATAAGTTTCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2757
Ortholog function: Histidine permease YuiF
Shewanella oneidensis MR-1 SO2757 -225 4.2 ATTTAAGACCAATATCACATTT
Shewanella putrefaciens CN-32 Sputcn32_1598 -225 4.2 ATTTAAGACCAATATCACATTT
Shewanella sp W3-18-1 Sputw3181_2424 -225 4.2 ATTTAAGACCAATATCACATTT
Shewanella sp ANA-3 Shewana3_2542 -225 4.2 ATTTAAGACCAATATCACATTT
Shewanella sp MR-4 Shewmr4_2377 -225 4.2 ATTTAAGACCAATATCACATTT
Shewanella sp MR-7 Shewmr7_2449 -225 4.2 ATTTAAGACCAATATCACATTT
Shewanella baltica OS155 Sbal_1737 -227 4.2 ATTTAAGACCAATATCACATTT
Shewanella denitrificans OS217 Sden_2092 -208 4.3 ATATGCGAGAGGGATCACAATC
Shewanella frigidimarina NCIMB 400 Sfri_1454 -191 3.5 TTAAATAATAAGTTTCAAATAT
Shewanella amazonensis SB2B Sama_2095 -210 3.9 AATTTGGAGGAATATCACACAA
Shewanella loihica PV-4 Shew_1515 -230 4 ATTTGGGATCATTGTCACTTTT
Shewanella halifaxensis HAW-EB4 Shal_1682 -225 3.9 ATTTGATATCAATATCACTTTT
Shewanella piezotolerans WP3 swp_1820 -77 4.1 ATTTGAGAGCAATATCACTTTT
Shewanella sediminis HAW-EB3 Ssed_1847 -226 4.5 ATTTGGGATCAATATCACCTTT
Shewanella woodyi ATCC 51908 Swoo_2742 -155 4 TTTAGTGCTGTTATTTACACTT
Position: -55
Score: 4
Sequence: AAGTGTGACTAAGGTTACCATT
Locus tag: Sfri_1487
Sfri_1487 -55 4 AAGTGTGACTAAGGTTACCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2589
Ortholog function: isopenicillin N synthase
Shewanella frigidimarina NCIMB 400 Sfri_1487 -55 4 AAGTGTGACTAAGGTTACCATT
Shewanella loihica PV-4 Shew_1590 -85 4.3 AAACGTGATTTTTATCACACCC
Shewanella pealeana ATCC 700345 Spea_2507 -84 4.2 AAGCGTGATCTAGCTCACTCAC
Shewanella halifaxensis HAW-EB4 Shal_1764 -84 4.4 CAGCGTGATCTACGTCACATTG
Shewanella piezotolerans WP3 swp_3059 -87 4.2 GAATGTGATCTAGCTCACAGGT
Shewanella sediminis HAW-EB3 Ssed_2637 -51 5.1 AAACGTGATTTCAATCACACTT
Shewanella woodyi ATCC 51908 Swoo_2030 -82 4.2 CAAGGTGATTTATCTCACACAG
Position: -250
Score: 4
Sequence: TTACATGATATAGCGCACATCT
Locus tag: Sfri_1504
Sfri_1504 -250 4 TTACATGATATAGCGCACATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_1504
Ortholog function: cytochrome c3
Shewanella frigidimarina NCIMB 400 Sfri_1504 -250 4 TTACATGATATAGCGCACATCT
-144 3.9 TAATTTGAGATTGTTTATAAAT
Shewanella pealeana ATCC 700345 Spea_1806 -155 4.5 TAATTTGATGGAGCGCACGTTT
Shewanella halifaxensis HAW-EB4 Shal_2472 -156 4.5 TAATTTGACTGAGCGCACATTT
Shewanella piezotolerans WP3 swp_2923 -184 4.3 TAGTTTGATGGAGCGCACGTTT
Position: -237
Score: 4.9
Sequence: TTTTGTGATGCAGATCTCAATC
Locus tag: Sfri_1546
Sfri_1546 -237 4.9 TTTTGTGATGCAGATCTCAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2858
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO2858 -105 4.8 TATTGTGAGTAAGTTCGCAAAT
Shewanella putrefaciens CN-32 Sputcn32_2359 -75 4.2 AGTCGTGATTGTGCTCACACCA
Shewanella sp W3-18-1 Sputw3181_1650 -75 4.2 AGTCGTGATTGTGCTCACACCA
Shewanella sp ANA-3 Shewana3_1574 -105 4 GGATGTGAGCCGCTTCGCAAAT
Shewanella sp MR-4 Shewmr4_1513 -105 3.9 CCGTGTGAGGTATTTCGCAAAT
Shewanella sp MR-7 Shewmr7_1580 -105 3.9 CCGTGTGAGGTATTTCGCAAAT
Shewanella baltica OS155 Sbal_2639 -75 4.2 AGTCGTGATTGTGCTCACACCA
Shewanella frigidimarina NCIMB 400 Sfri_1546 -237 4.9 TTTTGTGATGCAGATCTCAATC
Position: -42
Score: 4.4
Sequence: TATAGTGATATTGTTCGCCCAT
Locus tag: Sfri_1548
Sfri_1548 -42 4.4 TATAGTGATATTGTTCGCCCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2856
Ortholog function: predicted signal-transduction protein containing cAMP-binding and CBS domains
Shewanella oneidensis MR-1 SO2856 -105 4.8 TATTGTGAGTAAGTTCGCAAAT
Shewanella putrefaciens CN-32 Sputcn32_2357 -75 4.2 AGTCGTGATTGTGCTCACACCA
Shewanella sp W3-18-1 Sputw3181_1652 -75 4.2 AGTCGTGATTGTGCTCACACCA
Shewanella sp ANA-3 Shewana3_1576 -105 4 GGATGTGAGCCGCTTCGCAAAT
Shewanella sp MR-4 Shewmr4_1515 -105 3.9 CCGTGTGAGGTATTTCGCAAAT
Shewanella sp MR-7 Shewmr7_1582 -105 3.9 CCGTGTGAGGTATTTCGCAAAT
Shewanella baltica OS155 Sbal_2637 -75 4.2 AGTCGTGATTGTGCTCACACCA
Shewanella frigidimarina NCIMB 400 Sfri_1548 -237 4.9 TTTTGTGATGCAGATCTCAATC
Position: -44
Score: 3.8
Sequence: AAATTTTATTTTTATCCAATTT
Locus tag: Sfri_1637
Sfri_1637 -44 3.8 AAATTTTATTTTTATCCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cdd
Ortholog function: cytidine deaminase (EC 3.5.4.5)
Shewanella oneidensis MR-1 SO2791 -82 4.1 AAACGCGAACTAACTCGCATTT
Shewanella putrefaciens CN-32 Sputcn32_1568 -131 3.8 TATGGTGAAATCGGTCAAATAC
-82 4.2 AAACGCGAGCTAACTCGCATTT
Shewanella sp W3-18-1 Sputw3181_2531 -131 3.8 TATGGTGAAATCGGTCAAATAC
-82 4.2 AAACGCGAGCTAACTCGCATTT
Shewanella sp ANA-3 Shewana3_2573 -82 4.1 AAACGCGAACTAACTCGCATTT
Shewanella sp MR-4 Shewmr4_2411 -82 4.1 AAACGCGAACTAACTCGCATTT
Shewanella sp MR-7 Shewmr7_2481 -82 4.1 AAACGCGAACTAACTCGCATTT
Shewanella baltica OS155 Sbal_1694 -157 3.8 ATTCGTGAATAGACTCACTCTA
-82 4.2 AAACGCGAGCTAACTCGCATTT
Shewanella frigidimarina NCIMB 400 Sfri_1637 -44 3.8 AAATTTTATTTTTATCCAATTT
Shewanella amazonensis SB2B Sama_1974 -82 4 AAATGGGATTAGACTCCCATTA
Shewanella halifaxensis HAW-EB4 Shal_1783 -81 3.9 AACTGAGATCTTCATCTCATTC
Shewanella piezotolerans WP3 swp_3037 -82 4.1 AAGTGCGATCTCTGTCGCATTC
Shewanella sediminis HAW-EB3 Ssed_2618 -82 3.9 AAATGGGAGCTGGATCTCATCA
Shewanella woodyi ATCC 51908 Swoo_2048 -82 3.9 AAATGGGAGAAAGATCCCATTA
Position: -165
Score: 4.7
Sequence: TTATGTGATTATGATCGAAAAT
Locus tag: Sfri_1733
Sfri_1733 -165 4.7 TTATGTGATTATGATCGAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadD1
Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Shewanella oneidensis MR-1 SO2581 -155 5.1 TTATGTGATGATGATCAAAATT
Shewanella putrefaciens CN-32 Sputcn32_1761 -154 5.1 TTATGTGATGATGATCAAAATT
Shewanella sp W3-18-1 Sputw3181_2264 -154 5.1 TTATGTGATGATGATCAAAATT
Shewanella sp ANA-3 Shewana3_2386 -155 5.1 TTATGTGATGATGATCAAAATT
Shewanella sp MR-4 Shewmr4_2177 -155 5.1 TTATGTGATGATGATCAAAATT
Shewanella sp MR-7 Shewmr7_2254 -155 5.1 TTATGTGATGATGATCAAAATT
Shewanella baltica OS155 Sbal_1864 -156 5.1 TTATGTGATGATGATCAAAATT
Shewanella denitrificans OS217 Sden_1625 -189 4.1 TTATGTGATTATGGGCCCAAAT
Shewanella frigidimarina NCIMB 400 Sfri_1733 -165 4.7 TTATGTGATTATGATCGAAAAT
Shewanella amazonensis SB2B Sama_1934 -140 4.8 TTATGTGATGATTGTCAAAAAT
Shewanella loihica PV-4 Shew_2188 -149 4.9 TTGTGTGATGATGTTCAAAATT
Shewanella pealeana ATCC 700345 Spea_2448 -156 5 TTATGTGATGATAATCAAAATT
Shewanella halifaxensis HAW-EB4 Shal_1832 -155 5 TTATGTGATGATAATCAAAATT
Shewanella piezotolerans WP3 swp_2289 -153 5 ATATGTGATGATAATCAAAATT
Shewanella sediminis HAW-EB3 Ssed_2523 -151 5 TTATGTGATGATGATCATAATT
Shewanella woodyi ATCC 51908 Swoo_2110 -153 5.1 TTATGTGATGATGTTCAAAATT
Position: -102
Score: 4.2
Sequence: AACAATGATTCACATCACAAAA
Locus tag: Sfri_1747
Sfri_1747 -102 4.2 AACAATGATTCACATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodB
Ortholog function: superoxide dismutase [Fe] (EC 1.15.1.1)
Shewanella oneidensis MR-1 SO2881 -91 4.3 AACAATGATTCACATCACAAAT
Shewanella putrefaciens CN-32 Sputcn32_1687 -91 4.3 AACAATGATTCACATCACAAAT
Shewanella sp W3-18-1 Sputw3181_2338 -91 4.3 AACAATGATTCACATCACAAAT
Shewanella sp ANA-3 Shewana3_1639 -91 4.3 AACAATGATTCACATCACAAAT
Shewanella sp MR-4 Shewmr4_1572 -91 4.3 AACAATGATTCACATCACAAAT
Shewanella sp MR-7 Shewmr7_1647 -91 4.3 AACAATGATTCACATCACAAAT
Shewanella baltica OS155 Sbal_1782 -90 4.3 AACAATGATTCACATCACAAAT
Shewanella denitrificans OS217 Sden_1639 -106 4.3 AACAATGATGCACATCACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_1747 -102 4.2 AACAATGATTCACATCACAAAA
Shewanella amazonensis SB2B Sama_1920 -91 4.2 AAGAATGATTCACATCACAGAT
Shewanella loihica PV-4 Shew_1834 -89 3.8 AACAATGATTCACATCACAACT
Shewanella halifaxensis HAW-EB4 Shal_2336 -93 3.7 AACAATGATACACTTCACAACT
Position: -155
Score: 4.5
Sequence: TTTTGTGATGTGAATCATTGTT
Locus tag: Sfri_1748
Sfri_1748 -155 4.5 TTTTGTGATGTGAATCATTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhD
Ortholog function: Probable monothiol glutaredoxin ydhD
Shewanella oneidensis MR-1 SO2880 -157 4.5 ATTTGTGATGTGAATCATTGTT
Shewanella putrefaciens CN-32 Sputcn32_1688 -156 4.5 ATTTGTGATGTGAATCATTGTT
Shewanella sp W3-18-1 Sputw3181_2337 -156 4.5 ATTTGTGATGTGAATCATTGTT
Shewanella sp ANA-3 Shewana3_1640 -157 4.5 ATTTGTGATGTGAATCATTGTT
Shewanella sp MR-4 Shewmr4_1573 -157 4.5 ATTTGTGATGTGAATCATTGTT
Shewanella sp MR-7 Shewmr7_1648 -157 4.5 ATTTGTGATGTGAATCATTGTT
Shewanella baltica OS155 Sbal_1783 -156 4.5 ATTTGTGATGTGAATCATTGTT
Shewanella denitrificans OS217 Sden_1640 -137 4.5 TTTTGTGATGTGCATCATTGTT
Shewanella frigidimarina NCIMB 400 Sfri_1748 -155 4.5 TTTTGTGATGTGAATCATTGTT
Shewanella amazonensis SB2B Sama_1919 -173 4.2 ATCTGTGATGTGAATCATTCTT
Shewanella loihica PV-4 Shew_1835 -164 4.2 AGTTGTGATGTGAATCATTGTT
Shewanella pealeana ATCC 700345 Spea_1964 -154 3.6 ACTTGTGAAGTGTATCATTGTT
Shewanella halifaxensis HAW-EB4 Shal_2335 -154 3.9 AGTTGTGAAGTGTATCATTGTT
Shewanella piezotolerans WP3 swp_2753 -153 3.6 ACTTGTGAAGTGTATCATTGTT
Position: -67
Score: 3.8
Sequence: TCTTGTGAATGAGATCAATAAT
Locus tag: Sfri_1869
Sfri_1869 -67 3.8 TCTTGTGAATGAGATCAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadE2
Ortholog function: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Shewanella oneidensis MR-1 SO2536 -72 4.8 AATTGTGATCGCAATCAACAAA
Shewanella putrefaciens CN-32 Sputcn32_1791 -72 4.6 AATTGTGATCGCCATCAATAAA
Shewanella sp W3-18-1 Sputw3181_2234 -72 4.6 AATTGTGATCGCCATCAATAAA
Shewanella sp ANA-3 Shewana3_2323 -72 4.8 AATTGTGATCGCAATCAACAAA
Shewanella sp MR-4 Shewmr4_2146 -72 4.8 AATTGTGATCGCAATCAACAAA
Shewanella sp MR-7 Shewmr7_2223 -72 4.8 AATTGTGATCGCAATCAACAAA
Shewanella baltica OS155 Sbal_2306 -72 4.8 AATTGTGATCGCAATCAACAAA
Shewanella denitrificans OS217 Sden_1764 -66 3.8 ACTTGTGAATAGGATCATCATA
Shewanella frigidimarina NCIMB 400 Sfri_1869 -67 3.8 TCTTGTGAATGAGATCAATAAT
Shewanella amazonensis SB2B Sama_1870 -64 4.3 ACTTGTGATCAGGATCGCTTAT
Shewanella loihica PV-4 Shew_2108 -71 4.9 AATTGTGATTATGGTCATATAA
Shewanella pealeana ATCC 700345 Spea_2393 -70 4.5 AATTGTGAGATAGAACTCAAAA
Shewanella halifaxensis HAW-EB4 Shal_1890 -70 4.3 AATTGTGAGATAAACCTCAAAA
Shewanella piezotolerans WP3 swp_2312 -97 3.5 AATTGTGACGTAGACCCGCAAA
Shewanella sediminis HAW-EB3 Ssed_1999 -71 4.5 AATTGTGATTATGATCAATAAA
Shewanella woodyi ATCC 51908 Swoo_2604 -73 4.8 AATTGTGATATCGATCAATATA
Position: -203
Score: 3.9
Sequence: ATTATTGATCTCATTCACAAGA
Locus tag: Sfri_1870
Sfri_1870 -203 3.9 ATTATTGATCTCATTCACAAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2535
Ortholog function: Predicted glutamine amidotransferase
Shewanella oneidensis MR-1 SO2535 -194 4.4 TTTGTTGATTGCGATCACAATT
Shewanella putrefaciens CN-32 Sputcn32_1792 -193 4.7 TTTATTGATGGCGATCACAATT
Shewanella sp W3-18-1 Sputw3181_2233 -193 4.7 TTTATTGATGGCGATCACAATT
Shewanella sp ANA-3 Shewana3_2322 -133 4.4 TTTGTTGATTGCGATCACAATT
Shewanella sp MR-4 Shewmr4_2145 -193 4.4 TTTGTTGATTGCGATCACAATT
Shewanella sp MR-7 Shewmr7_2222 -193 4.4 TTTGTTGATTGCGATCACAATT
Shewanella baltica OS155 Sbal_2305 -193 4.4 TTTGTTGATTGCGATCACAATT
Shewanella denitrificans OS217 Sden_1765 -204 3.7 TATGATGATCCTATTCACAAGT
Shewanella frigidimarina NCIMB 400 Sfri_1870 -203 3.9 ATTATTGATCTCATTCACAAGA
Shewanella amazonensis SB2B Sama_1869 -195 3.9 ATAAGCGATCCTGATCACAAGT
Shewanella loihica PV-4 Shew_2107 -191 4.6 TTATATGACCATAATCACAATT
Shewanella pealeana ATCC 700345 Spea_2392 -196 4.4 TTTTGAGTTCTATCTCACAATT
Shewanella halifaxensis HAW-EB4 Shal_1891 -199 4.2 TTTTGAGGTTTATCTCACAATT
Shewanella sediminis HAW-EB3 Ssed_2000 -191 4.5 TTTATTGATCATAATCACAATT
Shewanella woodyi ATCC 51908 Swoo_2603 -190 4.8 TATATTGATCGATATCACAATT
Position: -111
Score: 4.9
Sequence: TGTTGTGATCTATATCAAGTTA
Locus tag: Sfri_1948
Sfri_1948 -111 4.9 TGTTGTGATCTATATCAAGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sbal_1323
Ortholog function: HTH-type transcriptional regulator BetI
Shewanella frigidimarina NCIMB 400 Sfri_1948 -111 4.9 TGTTGTGATCTATATCAAGTTA
Shewanella pealeana ATCC 700345 Spea_1009 -164 4.1 ATGCGTGAGGTGAGTCACGCTT
-135 3.7 AAGCTTGATCGTTATAACCCTA
Shewanella halifaxensis HAW-EB4 Shal_1059 -163 4.3 ATCTGTGAACCTTGTCGCATTT
Shewanella piezotolerans WP3 swp_3809 -141 4.7 TTCTGTGATTCAGGTCGCAAAT
Shewanella sediminis HAW-EB3 Ssed_1121 -140 4.3 ATCTGTGATGCAAGTCGCAATC
Position: -181
Score: 3.8
Sequence: AACCGTGACATCAATCAAATCA
Locus tag: Sfri_1999
Sfri_1999 -181 3.8 AACCGTGACATCAATCAAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psrA
Ortholog function: polysulfide reductase, subunit A
Shewanella sp ANA-3 Shewana3_3619 -278 3.8 TCTATTGATCCTATTCACGAAT
Shewanella sp MR-4 Shewmr4_3444 -273 4 CTTATTGATCTTATTCACGATT
Shewanella sp MR-7 Shewmr7_0507 -273 4 CTTATTGATCTTATTCACGATT
Shewanella frigidimarina NCIMB 400 Sfri_1999 -181 3.8 AACCGTGACATCAATCAAATCA
Shewanella pealeana ATCC 700345 Spea_3039 -182 4.4 AACTGTGAATTGCCTCACAAAC
Shewanella halifaxensis HAW-EB4 Shal_3127 -183 4.5 AACTGTGAATTGCTTCACAAAC
Shewanella piezotolerans WP3 swp_1238 -191 4.4 AACTGTGAAACAACTCACAAAG
Shewanella sediminis HAW-EB3 Ssed_4047 -228 3.9 ACATTAGATAAATATCACATTT
Position: -186
Score: 4.4
Sequence: TTTTTTGACTTAGCTCAAGTAT
Locus tag: Sfri_2010
Sfri_2010 -186 4.4 TTTTTTGACTTAGCTCAAGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccoN
Ortholog function: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Shewanella oneidensis MR-1 SO2364 -173 4.3 TTTTTTGACATGGCTCAAGTAT
-125 4.1 AAATGTGAAGGATAACGCATTG
Shewanella putrefaciens CN-32 Sputcn32_1959 -171 4.2 TTTTTTGACATTGCTCAAGTAT
Shewanella sp W3-18-1 Sputw3181_2046 -171 4.2 TTTTTTGACATTGCTCAAGTAT
Shewanella sp ANA-3 Shewana3_2107 -171 4.3 TTTTTTGACATGGCTCAAGTAT
Shewanella sp MR-4 Shewmr4_2006 -171 4.3 TTTTTTGACATGGCTCAAGTAT
Shewanella sp MR-7 Shewmr7_1969 -171 4.3 TTTTTTGACATGGCTCAAGTAT
Shewanella baltica OS155 Sbal_2201 -173 4.5 TTTTTTGATATTGCTCAAGTAT
Shewanella baltica OS155 Sbal_4487 -173 4.5 TTTTTTGATATTGCTCAAGTAT
Shewanella denitrificans OS217 Sden_1851 -182 4.7 TTTTTTGATGTAGCTCAAGTAT
Shewanella frigidimarina NCIMB 400 Sfri_2010 -186 4.4 TTTTTTGACTTAGCTCAAGTAT
Shewanella amazonensis SB2B Sama_1791 -180 4.3 TTTTTTGACACAGCTCAAGTAT
Shewanella loihica PV-4 Shew_1985 -178 4.5 TTTTTTGATATTGCTCAAGTAT
Shewanella pealeana ATCC 700345 Spea_2214 -219 4.1 TACCTTGATCTAGATCAACTTA
-176 4.6 TTTTTTGATATAGCTCAAGTAT
Shewanella halifaxensis HAW-EB4 Shal_2197 -221 4.5 AGATTTGATCTAGATCAACTTT
-178 4.6 TTTTTTGATATAGCTCAAGTAT
Shewanella piezotolerans WP3 swp_2572 -221 4.3 TAGCTTGATCTAGATCAACTTT
-178 4.4 TTTTTTGACATAGCTCAAGTAT
Shewanella sediminis HAW-EB3 Ssed_2211 -177 4.4 TTTTTTGACATAGCTCAAGTAT
Shewanella woodyi ATCC 51908 Swoo_2425 -220 4.3 TAGCTTGATCTAGATCAACTTT
-177 4.4 TTTTTTGACATAGCTCAAGTAT
Position: -213
Score: 3.8
Sequence: AAACGTTAAATCCATTACATTA
Position: -41
Score: 3.7
Sequence: TTTAATGATGCGATTCAGAGAT
Locus tag: Sfri_2098
Sfri_2098 -213 3.8 AAACGTTAAATCCATTACATTA
-41 3.7 TTTAATGATGCGATTCAGAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gloA
Ortholog function: lactoylglutathione lyase (EC 4.4.1.5)
Shewanella putrefaciens CN-32 Sputcn32_2101 -120 3.8 TTTTGTGAGCAACAACCAATTT
-4 3.8 ATTAATGATCTCGTTAACGCAA
Shewanella sp W3-18-1 Sputw3181_1911 -120 3.8 TTTTGTGAGCAACAACCAATTT
-4 3.8 ATTAATGATCTCGTTAACGCAA
Shewanella sp ANA-3 Shewana3_2232 -205 4 TTTTGTGAGCAAGAGCTAAATA
-153 4.4 CAAAGTGACGTAGCTCACAAAG
Shewanella sp MR-4 Shewmr4_2107 -205 4 TTTTGTGAGCAAGAGCTAAATA
-153 4.8 CAAAGTGATACAGCTCACATTA
Shewanella sp MR-7 Shewmr7_1867 -205 4 TTTTGTGAGCAAGAGCTAAATA
-153 4.8 CAAAGTGATACAGCTCACATTA
Shewanella baltica OS155 Sbal_2269 -196 4 TTTTGTGAGCGACAGCCAATTT
Shewanella baltica OS155 Sbal_4555 -196 4 TTTTGTGAGCGACAGCCAATTT
Shewanella frigidimarina NCIMB 400 Sfri_2179 -101 4.6 AAATGTGAACTAAAGCAAAATT
Shewanella frigidimarina NCIMB 400 Sfri_2098 -213 3.8 AAACGTTAAATCCATTACATTA
-41 3.7 TTTAATGATGCGATTCAGAGAT
Shewanella amazonensis SB2B Sama_1837 -96 4.3 AACTGTGAGTTGCTTCAGATTT
Shewanella halifaxensis HAW-EB4 Shal_1924 -95 4 TAAATTGATCTCGCTCAATTTT
Shewanella sediminis HAW-EB3 Ssed_2709 -312 3.8 TTTTGTAATTTTTTAAACAGTA
Shewanella woodyi ATCC 51908 Swoo_2563 -243 3.8 TTTTATGACTCTATTAATATAA
Position: -207
Score: 3.4
Sequence: ATTAGTGATCTGCGACAATTTG
Position: -174
Score: 3.8
Sequence: TTTTGTTAACTTGATCAACATC
Position: -168
Score: 4.4
Sequence: TAACTTGATCAACATCATAAAT
Position: -107
Score: 3.5
Sequence: CAAATTGATTTATATCAAAGAC
Locus tag: Sfri_2103
Sfri_2103 -207 3.4 ATTAGTGATCTGCGACAATTTG
-174 3.8 TTTTGTTAACTTGATCAACATC
-168 4.4 TAACTTGATCAACATCATAAAT
-107 3.5 CAAATTGATTTATATCAAAGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hyaA
Ortholog function: Quinone-reactive Ni/Fe-hydrogenase small chain precursor (EC 1.12.5.1)
Shewanella oneidensis MR-1 SO2099 -105 4 ATTCTTGATATGCATCAATAAT
Shewanella putrefaciens CN-32 Sputcn32_2088 -167 3.7 AAATTAGATCTGCGTCATGTTA
-107 4 ATTCTTGATATACATCAATAAT
Shewanella sp W3-18-1 Sputw3181_1924 -167 3.7 AAATTAGATCTGCGTCATGTTA
-107 4 ATTCTTGATATACATCAATAAT
Shewanella sp ANA-3 Shewana3_1880 -166 3.9 AAATTAGATCTGCATCATGTTA
-106 4.2 ATTCTTGATATGCATCAAGAAT
Shewanella sp MR-4 Shewmr4_1822 -166 3.9 AAATTAGATCTGCATCATGTTA
-106 4.2 ATTCTTGATATGCATCAAGAAT
Shewanella sp MR-7 Shewmr7_2155 -166 3.9 AAATTAGATCTGCATCATGTTA
-106 4.2 ATTCTTGATATGCATCAAGAAT
Shewanella baltica OS155 Sbal_1889 -229 3.9 TTAAGTGACCGATTTCATCCAA
-167 3.7 AAATTAGATCTACGTCATGTTA
-107 4.2 ATTCTTGATATACATCAAGAAT
Shewanella frigidimarina NCIMB 400 Sfri_2103 -174 3.8 TTTTGTTAACTTGATCAACATC
-168 4.4 TAACTTGATCAACATCATAAAT
Shewanella amazonensis SB2B Sama_1679 -172 3.4 AAGCATGACACACCTCATGTTA
Shewanella loihica PV-4 Shew_1765 -164 3.8 AAACTTGATCCAGCTCATAGCT
-103 3.7 AATGTTGACATACATCAACATT
Shewanella pealeana ATCC 700345 Spea_2033 -211 4.6 TTACGTGACCACGATCACCTTT
Shewanella halifaxensis HAW-EB4 Shal_2261 -212 5 TTACGTGATCTCCATCACCTTT
Shewanella sediminis HAW-EB3 Ssed_1908 -162 4 AAAGATGATCTAGTTCATATTG
Position: -122
Score: 4.6
Sequence: AAATGTGATGTAGCCCAAAAAG
Locus tag: Sfri_2156
Sfri_2156 -122 4.6 AAATGTGATGTAGCCCAAAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fumB
Ortholog function: Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Shewanella oneidensis MR-1 SO2222 -105 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella putrefaciens CN-32 Sputcn32_1807 -103 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella sp W3-18-1 Sputw3181_2218 -103 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella sp ANA-3 Shewana3_2302 -104 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella sp MR-4 Shewmr4_2124 -104 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella sp MR-7 Shewmr7_2200 -104 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella baltica OS155 Sbal_1918 -103 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella denitrificans OS217 Sden_1912 -131 3.9 AAATGTGATGTAGCCCCAAAAG
Shewanella frigidimarina NCIMB 400 Sfri_2156 -122 4.6 AAATGTGATGTAGCCCAAAAAG
Shewanella amazonensis SB2B Sama_1688 -144 4.2 ACTTGTGATGTAGCCCAAAGAT
Shewanella loihica PV-4 Shew_1904 -111 3.9 AAATGTGATGTTCCCCTAAAAG
-73 4.8 TATTGTGAACGGATTCAAAAAA
Shewanella pealeana ATCC 700345 Spea_2038 -162 4.3 AAATGTGATGTTTAACTCAAAC
Shewanella halifaxensis HAW-EB4 Shal_2256 -162 4.3 AAATGTGATGTTTAACTCAAAC
Shewanella piezotolerans WP3 swp_2633 -162 4.4 AAATGTGATGTTTAACTCAAAG
Shewanella sediminis HAW-EB3 Ssed_2358 -194 3.8 AAATGTGATATTCCCCTAAAAG
Position: -101
Score: 4.6
Sequence: AAATGTGAACTAAAGCAAAATT
Locus tag: Sfri_2179
Sfri_2179 -101 4.6 AAATGTGAACTAAAGCAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gloA
Ortholog function: lactoylglutathione lyase (EC 4.4.1.5)
Shewanella putrefaciens CN-32 Sputcn32_2101 -120 3.8 TTTTGTGAGCAACAACCAATTT
-4 3.8 ATTAATGATCTCGTTAACGCAA
Shewanella sp W3-18-1 Sputw3181_1911 -120 3.8 TTTTGTGAGCAACAACCAATTT
-4 3.8 ATTAATGATCTCGTTAACGCAA
Shewanella sp ANA-3 Shewana3_2232 -205 4 TTTTGTGAGCAAGAGCTAAATA
-153 4.4 CAAAGTGACGTAGCTCACAAAG
Shewanella sp MR-4 Shewmr4_2107 -205 4 TTTTGTGAGCAAGAGCTAAATA
-153 4.8 CAAAGTGATACAGCTCACATTA
Shewanella sp MR-7 Shewmr7_1867 -205 4 TTTTGTGAGCAAGAGCTAAATA
-153 4.8 CAAAGTGATACAGCTCACATTA
Shewanella baltica OS155 Sbal_2269 -196 4 TTTTGTGAGCGACAGCCAATTT
Shewanella baltica OS155 Sbal_4555 -196 4 TTTTGTGAGCGACAGCCAATTT
Shewanella frigidimarina NCIMB 400 Sfri_2179 -101 4.6 AAATGTGAACTAAAGCAAAATT
Shewanella frigidimarina NCIMB 400 Sfri_2098 -213 3.8 AAACGTTAAATCCATTACATTA
-41 3.7 TTTAATGATGCGATTCAGAGAT
Shewanella amazonensis SB2B Sama_1837 -96 4.3 AACTGTGAGTTGCTTCAGATTT
Shewanella halifaxensis HAW-EB4 Shal_1924 -95 4 TAAATTGATCTCGCTCAATTTT
Shewanella sediminis HAW-EB3 Ssed_2709 -312 3.8 TTTTGTAATTTTTTAAACAGTA
Shewanella woodyi ATCC 51908 Swoo_2563 -243 3.8 TTTTATGACTCTATTAATATAA
Position: -242
Score: 4.6
Sequence: AATTGTGATCTGTACCTAATTT
Locus tag: Sfri_2257
Sfri_2257 -242 4.6 AATTGTGATCTGTACCTAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: icd
Ortholog function: isocitrate dehydrogenase [NADP] (EC 1.1.1.42); monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Shewanella oneidensis MR-1 SO2629 -199 4.1 AAATGTGATCTACACCTAAATG
Shewanella putrefaciens CN-32 Sputcn32_2230 -212 3.9 AAATGTGATCTGTGCCTAAATG
Shewanella sp W3-18-1 Sputw3181_1779 -212 3.9 AAATGTGATCTGTGCCTAAATG
Shewanella sp ANA-3 Shewana3_1750 -209 3.9 AAATGTGATCTACGCCTAAATG
Shewanella sp MR-4 Shewmr4_1606 -208 3.9 AAATGTGATCTACGCCTAAATG
Shewanella sp MR-7 Shewmr7_1681 -208 3.9 AAATGTGATCTACGCCTAAATG
Shewanella baltica OS155 Sbal_2475 -212 3.9 AAATGTGATCTGTGCCTAAATG
Shewanella frigidimarina NCIMB 400 Sfri_2257 -242 4.6 AATTGTGATCTGTACCTAATTT
Shewanella loihica PV-4 Shew_1563 -237 3.8 ATTTATGATGTCGGCCAACTAA
-217 4.1 AAATGTGATCGATAGCAAAACG
Shewanella pealeana ATCC 700345 Spea_2535 -195 4.2 AAGTGTGATCTGCAGCTAACTA
Shewanella piezotolerans WP3 swp_1868 -21 4.2 AAGTGTGATCCGCAACTAAATT
Shewanella sediminis HAW-EB3 Ssed_1883 -275 3.9 AAGTGTGATCTGCGCCAAGTTG
Shewanella woodyi ATCC 51908 Swoo_2702 -304 3.9 AAGTGTGATCTAAGCCAAGTTG
Position: -125
Score: 4.1
Sequence: TTTTATGACTTAGGTCAACTTA
Locus tag: Sfri_2271
Sfri_2271 -125 4.1 TTTTATGACTTAGGTCAACTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_2271
Ortholog function: permease of the major facilitator superfamily
Shewanella frigidimarina NCIMB 400 Sfri_2271 -125 4.1 TTTTATGACTTAGGTCAACTTA
Shewanella loihica PV-4 Shew_1497 -123 4.3 TAACTTGAACTGGCTCACGTAA
Shewanella pealeana ATCC 700345 Spea_1591 -100 4.8 ATATTTGATCCAGCTCAAACTT
Shewanella halifaxensis HAW-EB4 Shal_1659 -100 4.3 ATGCTTGATCTAGCTCAAACTT
Shewanella piezotolerans WP3 swp_1789 -100 4.1 CTCTATGATATAGCTCACAGAT
Shewanella sediminis HAW-EB3 Ssed_1826 -165 3.8 CAACTTGATTTCGCTCAAGTAT
Shewanella woodyi ATCC 51908 Swoo_2762 -220 4.1 AAACTTGATTTCGCTCAAGTAA
Position: -135
Score: 5.1
Sequence: ATATGTGATCTAACTTACAATT
Locus tag: Sfri_2325
Sfri_2325 -135 5.1 ATATGTGATCTAACTTACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmgR
Ortholog function: Tyrosine degradation transcriptional regulator, LysR family
Shewanella oneidensis MR-1 SO1965 -148 4.4 TACTGTGATCTTCTTATCAATT
Shewanella putrefaciens CN-32 Sputcn32_1672 -148 4.8 TTATGTGATCTTGTTATCAATT
Shewanella sp W3-18-1 Sputw3181_2353 -148 4.8 TTATGTGATCTTGTTATCAATT
Shewanella sp ANA-3 Shewana3_2480 -148 4.6 TAGTGTGATCTTCTTATCAATT
-92 3.9 ATCTGTTATCTCAATCTAAAAA
Shewanella sp MR-4 Shewmr4_2290 -148 4.6 TAGTGTGATCTTCTTATCAATT
-92 3.9 ATCTGTTATCTCAATCTAAAAA
Shewanella sp MR-7 Shewmr7_2362 -148 4.6 TAGTGTGATCTTCTTATCAATT
-92 3.9 ATCTGTTATCTCTATCTAAAAA
Shewanella baltica OS155 Sbal_2614 -148 4.7 TAGTGTGATCTTGTTATCAATT
Shewanella denitrificans OS217 Sden_2161 -146 4.3 CGTTGTGATCTAGCTATCAATT
Shewanella frigidimarina NCIMB 400 Sfri_2325 -135 5.1 ATATGTGATCTAACTTACAATT
Shewanella amazonensis SB2B Sama_1570 -135 4.7 ATATGTGATCTGGGTATCAATT
Shewanella loihica PV-4 Shew_2153 -115 5.1 TTATGTGATCTAAGTAACAATT
Shewanella pealeana ATCC 700345 Spea_1875 -114 4.3 TAATGTGATCTAGGTTCAATTT
Shewanella halifaxensis HAW-EB4 Shal_2408 -114 4.5 TAATGTGATCTAGCTTTAATTT
Shewanella piezotolerans WP3 swp_2869 -115 4.9 TAATGTGATCTTGTTATCAATT
Shewanella sediminis HAW-EB3 Ssed_2686 -116 4.5 ATTTGTGACATACCTATCAATT
Shewanella woodyi ATCC 51908 Swoo_1933 -116 4.5 ATGTGTGATCTAAGTATCAATT
Position: -126
Score: 3.5
Sequence: TTTGTTGATCTTTACCACTAAA
Position: -106
Score: 5
Sequence: AATTGTAAGTTAGATCACATAT
Locus tag: Sfri_2326
Sfri_2326 -126 3.5 TTTGTTGATCTTTACCACTAAA
-106 5 AATTGTAAGTTAGATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmgA
Ortholog function: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Shewanella oneidensis MR-1 SO1963 -92 3.8 AATTGATAAGAAGATCACAGTA
Shewanella putrefaciens CN-32 Sputcn32_1671 -66 4.1 AATTGATAACAAGATCACATAA
Shewanella sp W3-18-1 Sputw3181_2354 -66 4.1 AATTGATAACAAGATCACATAA
Shewanella sp ANA-3 Shewana3_2481 -144 3.9 TTTTTAGATTGAGATAACAGAT
-88 3.9 AATTGATAAGAAGATCACACTA
Shewanella sp MR-4 Shewmr4_2291 -144 3.9 TTTTTAGATTGAGATAACAGAT
-88 3.9 AATTGATAAGAAGATCACACTA
Shewanella sp MR-7 Shewmr7_2363 -144 3.9 TTTTTAGATAGAGATAACAGAT
-88 3.9 AATTGATAAGAAGATCACACTA
Shewanella baltica OS155 Sbal_2615 -144 3.5 TTTTTAGATTGAGATAACGGAT
-88 4 AATTGATAACAAGATCACACTA
Shewanella denitrificans OS217 Sden_2162 -122 3.6 AATTGATAGCTAGATCACAACG
Shewanella frigidimarina NCIMB 400 Sfri_2326 -126 3.5 TTTGTTGATCTTTACCACTAAA
-106 5 AATTGTAAGTTAGATCACATAT
Shewanella amazonensis SB2B Sama_1569 -78 4.5 AATTGATACCCAGATCACATAT
Shewanella loihica PV-4 Shew_2154 -61 5.1 AATTGTTACTTAGATCACATAA
Shewanella pealeana ATCC 700345 Spea_1874 -63 4 AAATTGAACCTAGATCACATTA
Shewanella halifaxensis HAW-EB4 Shal_2409 -63 3.9 AAATTAAAGCTAGATCACATTA
Shewanella piezotolerans WP3 swp_2870 -84 3.5 TTTTTTGCTGTTGTTAGCAACT
-61 4.1 AATTGATAACAAGATCACATTA
Position: -74
Score: 4.1
Sequence: ACGTGTGATGTAACTTACGTTA
Position: -19
Score: 3.7
Sequence: AAGTTTGAAAGGAATAACAATG
Locus tag: Sfri_2343
Sfri_2343 -74 4.1 ACGTGTGATGTAACTTACGTTA
-19 3.7 AAGTTTGAAAGGAATAACAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sucA
Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Shewanella putrefaciens CN-32 Sputcn32_2269 -66 3.8 TGCCGTGATTTATCTCCCAGTT
Shewanella sp W3-18-1 Sputw3181_1739 -66 3.8 TGCCGTGATTTATCTCCCAGTT
Shewanella baltica OS155 Sbal_2515 -66 3.8 TGCCGTGATTCACATCCCAGTT
Shewanella denitrificans OS217 Sden_2183 -274 3.7 TGGATTGATGCAAATTACAAAA
-186 3.8 AAGGGCGACAAACATCACAATT
Shewanella frigidimarina NCIMB 400 Sfri_2343 -74 4.1 ACGTGTGATGTAACTTACGTTA
-19 3.7 AAGTTTGAAAGGAATAACAATG
Shewanella amazonensis SB2B Sama_1427 -80 3.7 TTTTGTGACGACTGTCGCCGTG
Shewanella pealeana ATCC 700345 Spea_1788 -86 4.4 AACCGTGATCTGGATCACTGAT
Shewanella halifaxensis HAW-EB4 Shal_2489 -86 4.9 ATCTGTGATCTGGATCACCGAT
Shewanella piezotolerans WP3 swp_2949 -20 4.6 AACTGTGACCTAGTTCACGGAT
Shewanella sediminis HAW-EB3 Ssed_2814 -86 4.2 GATCGTGACCTGTGTCACAGTT
Shewanella woodyi ATCC 51908 Swoo_1837 -87 4.8 ATTTGTGATCTAAATCACGCCT
Position: -116
Score: 4.8
Sequence: TTTTGTGATCGACTTCACGTCT
Locus tag: Sfri_2410
Sfri_2410 -116 4.8 TTTTGTGATCGACTTCACGTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2010
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO2010 -70 4.7 TTTTGTGATCTTCGTCACTGTA
Shewanella putrefaciens CN-32 Sputcn32_2305 -65 5.1 TTTTGTGATCTCCATCACCGTT
Shewanella sp W3-18-1 Sputw3181_1703 -65 5.1 TTTTGTGATCTCCATCACCGTT
Shewanella sp MR-4 Shewmr4_2257 -65 4.9 TTTTGTGATCTTAATCACTGTA
Shewanella sp MR-7 Shewmr7_2329 -65 4.9 TTTTGTGATCTTAATCACTGTA
Shewanella baltica OS155 Sbal_2577 -65 5 TTTTGTGATCTAAATCACTGTA
Shewanella denitrificans OS217 Sden_2384 -81 4.8 AAATGTGATCCAGCTCAGCTTT
Shewanella frigidimarina NCIMB 400 Sfri_2410 -116 4.8 TTTTGTGATCGACTTCACGTCT
Shewanella amazonensis SB2B Sama_1307 -51 4.3 TTTTGTGAGCTGCATCACGGCA
Shewanella loihica PV-4 Shew_2238 -48 4.1 AAAATTGATCTAGATCAATAAA
Shewanella pealeana ATCC 700345 Spea_1505 -51 4.1 AAAATTGATCTAGATCAATAAA
Shewanella halifaxensis HAW-EB4 Shal_1587 -80 4 TAGTGTGATTGATATCTATAAT
Shewanella piezotolerans WP3 swp_1711 -21 4.1 AAAATTGATCTAGATCAATAAA
Shewanella sediminis HAW-EB3 Ssed_2855 -49 4.1 AAAATTGATCTAGATCAATAAA
Shewanella woodyi ATCC 51908 Swoo_1790 -48 4.1 TAAATTGATCTAGATCAATAAA
Position: -149
Score: 5
Sequence: AAATGTGATGTTGTTCACATGT
Locus tag: Sfri_2416
Sfri_2416 -149 5 AAATGTGATGTTGTTCACATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2427
Ortholog function: TonB-dependent receptor
Shewanella oneidensis MR-1 SO2427 -319 5.1 AAGTGTGATTAAAATCACACTT
Shewanella putrefaciens CN-32 Sputcn32_1940 -318 5.7 TAGTGTGATCTACATCACATAA
-274 4 AAATGTTATTTTATTAACAGAG
Shewanella sp W3-18-1 Sputw3181_2068 -318 4.6 GCGTGTGATCTATATCACATAA
Shewanella sp ANA-3 Shewana3_1958 -320 5.2 AAGTGTGACACACATCACATAT
-276 4.4 AAATGTTATTTTCTTAACAGTT
Shewanella sp MR-4 Shewmr4_1903 -319 5.6 AAATGTGATGTGCGTCACATTT
-275 3.9 AAATGTTATTTTATTAACAGCT
Shewanella sp MR-7 Shewmr7_2075 -319 5.2 AAGTGTGACGTGTGTCACATTT
-275 4.3 AAATGTTATTTTATTAACAGTA
Shewanella baltica OS155 Sbal_2044 -317 5.1 AAGCGTGATCTGTGTCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_2416 -149 5 AAATGTGATGTTGTTCACATGT
-4 4.1 ATTCATGAGTTCAGTCACATTA
Shewanella amazonensis SB2B Sama_1838 -324 3.8 TTAATCGATATGGGTCACAGAA
-301 5.2 AAGTGTGATGCACGTCACAAAA
Shewanella loihica PV-4 Shew_2074 -308 5.1 TTTTGTGATAATGGTCACACTT
Shewanella halifaxensis HAW-EB4 Shal_1923 -306 5.5 AATTGTGATGCGCGTCACAATT
-199 4.1 ACTTGTGCTGTTTGTCACAATG
Shewanella piezotolerans WP3 swp_2362 -310 4.7 AAGCGTGACCTGTGTCACACTT
Shewanella sediminis HAW-EB3 Ssed_2036 -316 4.6 TTTCGTGACGCGCGTCACAGTT
Shewanella woodyi ATCC 51908 Swoo_2565 -321 4.9 TTCTGTGACCTGTGTCACAAAA
Position: -90
Score: 4
Sequence: TTTTTTGCCACATATAACAAAA
Locus tag: Sfri_2440
Sfri_2440 -90 4 TTTTTTGCCACATATAACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1482
Ortholog function: tonB-dependent receptor, putative
Shewanella frigidimarina NCIMB 400 Sfri_2440 -90 4 TTTTTTGCCACATATAACAAAA
Shewanella pealeana ATCC 700345 Spea_2930 -193 5.2 TTTTGTGATCTTCGTCACCTAT
Shewanella halifaxensis HAW-EB4 Shal_3021 -193 5.2 ATTTGTGACGTTGATCACCTAT
Shewanella piezotolerans WP3 swp_3568 -184 4.4 AACTGTGATCTCTATCACCGAC
Position: -298
Score: 4.1
Sequence: ACTTGTTATCCAGCTCTCACTT
Locus tag: Sfri_2472
Sfri_2472 -298 4.1 ACTTGTTATCCAGCTCTCACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spea_1673
Ortholog function: hypothetical protein
Shewanella putrefaciens CN-32 Sputcn32_2377 -298 3.8 AGTTGTTAAGTGCCTCCCAAAT
Shewanella sp W3-18-1 Sputw3181_1632 -298 3.8 AGTTGTTAAGTGCCTCCCAAAT
Shewanella frigidimarina NCIMB 400 Sfri_2472 -298 4.1 ACTTGTTATCCAGCTCTCACTT
Shewanella amazonensis SB2B Sama_1499 -278 3.9 CTATGTTAGCTGTGTCGCAAAT
Shewanella loihica PV-4 Shew_2389 -301 4 AGATGTTAACTAGCTCCCAAAT
Shewanella pealeana ATCC 700345 Spea_1673 -311 4.2 AGTTGTTAACTGGATCTCAAAT
Shewanella halifaxensis HAW-EB4 Shal_2591 -312 4.2 AGTTGTTAACTGGATCTCAAAT
Shewanella piezotolerans WP3 swp_1953 -311 4 AGTTGTTAAGTCGCTCTCAATT
Shewanella sediminis HAW-EB3 Ssed_1709 -311 3.9 AGTTGTTAAGTGGCTCCCAATT
Shewanella woodyi ATCC 51908 Swoo_2882 -310 4.2 AGTTGTTAACTGGATCTCAAAT
Position: -114
Score: 3.9
Sequence: TATTGTGACATATAGATAATAT
Locus tag: Sfri_2509
Sfri_2509 -114 3.9 TATTGTGACATATAGATAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: swp_4930
Ortholog function: transcriptional regulator, LysR family
Shewanella frigidimarina NCIMB 400 Sfri_2509 -114 3.9 TATTGTGACATATAGATAATAT
Shewanella pealeana ATCC 700345 Spea_4030 -80 3.8 TATTGTGGCCATAGTTACATTT
Shewanella halifaxensis HAW-EB4 Shal_0228 -81 4.3 TATTGTGCTCACAGTTACATTT
Shewanella piezotolerans WP3 swp_4930 -80 4.3 TAATGTGCCCCAAGTTACATTT
Shewanella sediminis HAW-EB3 Ssed_3221 -77 4.4 TATTGTGCGCCTGATTACATAT
Position: -339
Score: 4.3
Sequence: ATTTTTGACCTAGCTCGCCAAA
Locus tag: Sfri_2613
Sfri_2613 -339 4.3 ATTTTTGACCTAGCTCGCCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: miaE
Ortholog function: tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-)
Shewanella oneidensis MR-1 SO1788 -151 4.3 CTGTGTGATCAGGATCTCAGTT
-12 3.7 TTGAGTGATCCCATGCAACAAT
Shewanella putrefaciens CN-32 Sputcn32_1484 -105 4.5 TCATGTGATCCCGATCTCAGTT
Shewanella sp W3-18-1 Sputw3181_2617 -105 4.5 TCATGTGATCCCGATCTCAGTT
Shewanella sp ANA-3 Shewana3_2667 -150 4.5 CTATGTGATCAGGATCTCAGTT
Shewanella sp MR-4 Shewmr4_2501 -151 4.1 CGGTGTGATCAGGATCTCAGTT
Shewanella sp MR-7 Shewmr7_2569 -150 4.1 CGGTGTGATCAGGATCTCAGTT
Shewanella baltica OS155 Sbal_1598 -149 4.3 CTGTGTGATCAGGATCTCAGTT
Position: -42
Score: 3.8
Sequence: TTTGGCGAGCTAGGTCAAAAAT
Locus tag: Sfri_2614
Sfri_2614 -42 3.8 TTTGGCGAGCTAGGTCAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1787
Ortholog function: probable membrane protein YPO2362
Shewanella oneidensis MR-1 SO1787 -149 4.2 AACTGAGATCCTGATCACACAG
Shewanella putrefaciens CN-32 Sputcn32_1483 -154 4 AACTGAGATCGGGATCACATGA
Shewanella sp W3-18-1 Sputw3181_2618 -154 4 AACTGAGATCGGGATCACATGA
Shewanella sp ANA-3 Shewana3_2668 -151 4.4 AACTGAGATCCTGATCACATAG
Shewanella sp MR-4 Shewmr4_2502 -151 3.7 AACTGAGATCCTGATCACACCG
Shewanella sp MR-7 Shewmr7_2570 -151 3.7 AACTGAGATCCTGATCACACCG
Shewanella baltica OS155 Sbal_1597 -156 4.2 AACTGAGATCCTGATCACACAG
Position: -164
Score: 3.8
Sequence: TAGGCTGATCATCATCACACAA
Position: -4
Score: 3.4
Sequence: AAATATGATGAATAAAAAATAC
Locus tag: Sfri_2637
Sfri_2637 -164 3.8 TAGGCTGATCATCATCACACAA
-4 3.4 AAATATGATGAATAAAAAATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtrC
Ortholog function: surface localized decaheme cytochrome c lipoprotein, MtrC
Shewanella oneidensis MR-1 SO1778 -248 3.7 TGTTGTTTTTTTGCTCTCAATT
-190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella putrefaciens CN-32 Sputcn32_1478 -190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp W3-18-1 Sputw3181_2623 -190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp ANA-3 Shewana3_2676 -189 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp MR-4 Shewmr4_2510 -189 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp MR-7 Shewmr7_2578 -189 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella baltica OS155 Sbal_1589 -190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella frigidimarina NCIMB 400 Sfri_2637 -164 3.8 TAGGCTGATCATCATCACACAA
Shewanella amazonensis SB2B Sama_1208 -230 3.9 TTTTTTGATCTGAAACAGCTTT
-178 3.6 TAGCCGGATCCAGTTCACACAT
Shewanella loihica PV-4 Shew_2525 -179 3.6 TAGAAAGATCTCGGTCACACAT
Shewanella halifaxensis HAW-EB4 Shal_2784 -264 4 TTTTATTACATTTATCACGTAT
Shewanella sediminis HAW-EB3 Ssed_1525 -191 4 TAGGCTGATCTAGGTCACACAT
Shewanella woodyi ATCC 51908 Swoo_3125 -288 3.7 ATGAGTTACAACTTTCACACAT
Position: 8
Score: 3.5
Sequence: TAAATTGAACCTCATTACCTTA
Locus tag: Sfri_2639
Sfri_2639 8 3.5 TAAATTGAACCTCATTACCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtrB
Ortholog function: outer membrane protein, MtrB
Shewanella oneidensis MR-1 SO1776 -248 3.7 TGTTGTTTTTTTGCTCTCAATT
-190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella putrefaciens CN-32 Sputcn32_1476 -190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp W3-18-1 Sputw3181_2625 -190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp ANA-3 Shewana3_2678 -189 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp MR-4 Shewmr4_2512 -189 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella sp MR-7 Shewmr7_2580 -189 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella baltica OS155 Sbal_1587 -190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella frigidimarina NCIMB 400 Sfri_2639 -164 3.8 TAGGCTGATCATCATCACACAA
Shewanella amazonensis SB2B Sama_1206 -230 3.9 TTTTTTGATCTGAAACAGCTTT
-178 3.6 TAGCCGGATCCAGTTCACACAT
Shewanella loihica PV-4 Shew_2527 -179 3.6 TAGAAAGATCTCGGTCACACAT
Shewanella halifaxensis HAW-EB4 Shal_2786 -264 4 TTTTATTACATTTATCACGTAT
Shewanella sediminis HAW-EB3 Ssed_1523 -191 4 TAGGCTGATCTAGGTCACACAT
Shewanella woodyi ATCC 51908 Swoo_3127 -288 3.7 ATGAGTTACAACTTTCACACAT
Position: -104
Score: 3.9
Sequence: AAGTTAGAATCAGATCACACTT
Position: 0
Score: 3.7
Sequence: ATGAGTGATAGACAACAAGTAA
Locus tag: Sfri_2677
Sfri_2677 -104 3.9 AAGTTAGAATCAGATCACACTT
0 3.7 ATGAGTGATAGACAACAAGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadI
Ortholog function: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Shewanella oneidensis MR-1 SO3089 -131 3.9 AAGTTAGAATCAGATCACACTT
Shewanella putrefaciens CN-32 Sputcn32_2460 -136 3.9 AAGTTAGAATCAGATCACACTT
Shewanella sp W3-18-1 Sputw3181_1548 -136 3.9 AAGTTAGAATCAGATCACACTT
Shewanella sp ANA-3 Shewana3_1460 -135 3.9 AAGTTAGAATCAGATCACACTT
Shewanella sp MR-4 Shewmr4_1407 -135 3.9 AAGTTAGAATCAGATCACACTT
Shewanella sp MR-7 Shewmr7_1472 -135 3.9 AAGTTAGAATCAGATCACACTT
Shewanella baltica OS155 Sbal_2761 -136 3.9 AAGTTAGAATCAGATCACACTT
Shewanella denitrificans OS217 Sden_1529 -109 3.9 AAGTTAGAATCAGATCACACTT
Shewanella frigidimarina NCIMB 400 Sfri_2677 -104 3.9 AAGTTAGAATCAGATCACACTT
Shewanella amazonensis SB2B Sama_2168 -112 3.6 AAGTTAGAATCGGGTCACACTT
Shewanella loihica PV-4 Shew_2426 -134 3.9 AAGTTAGAATCAGATCACACTT
Shewanella pealeana ATCC 700345 Spea_2599 -116 3.9 AAGTTAGAATCAGATCACACTT
Shewanella halifaxensis HAW-EB4 Shal_2671 -119 3.9 AAGTTAGAATCAGATCACACTT
Shewanella piezotolerans WP3 swp_3140 -122 3.9 AAGTTAGAATCAGATCACACTT
Shewanella sediminis HAW-EB3 Ssed_1628 -151 3.9 AAGTTAGAATCAGATCACACTT
Shewanella woodyi ATCC 51908 Swoo_3027 -138 4.1 AAGTTAGAATCAGATCACATTT
Position: -167
Score: 4.6
Sequence: AAGTGTGATCTGATTCTAACTT
Locus tag: Sfri_2678
Sfri_2678 -167 4.6 AAGTGTGATCTGATTCTAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3090
Ortholog function: MoxR-like ATPase in aerotolerance operon
Shewanella oneidensis MR-1 SO3090 -165 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella putrefaciens CN-32 Sputcn32_2461 -97 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella sp W3-18-1 Sputw3181_1547 -97 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella sp ANA-3 Shewana3_1459 -160 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella sp MR-4 Shewmr4_1406 -160 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella sp MR-7 Shewmr7_1471 -160 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella baltica OS155 Sbal_2762 -148 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella denitrificans OS217 Sden_1528 -157 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella frigidimarina NCIMB 400 Sfri_2678 -167 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella amazonensis SB2B Sama_2169 -137 4.2 AAGTGTGACCCGATTCTAACTT
Shewanella loihica PV-4 Shew_2427 -296 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella pealeana ATCC 700345 Spea_2600 -306 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella halifaxensis HAW-EB4 Shal_2672 -319 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella piezotolerans WP3 swp_3141 -97 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella sediminis HAW-EB3 Ssed_1627 -316 4.6 AAGTGTGATCTGATTCTAACTT
Shewanella woodyi ATCC 51908 Swoo_3028 -306 4.8 AAATGTGATCTGATTCTAACTT
Position: -64
Score: 4.5
Sequence: AAGTGTGAACTAGATCGAACTT
Locus tag: Sfri_2686
Sfri_2686 -64 4.5 AAGTGTGAACTAGATCGAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: putP
Ortholog function: proline/sodium symporter PutP (TC 2.A.21.2.1) @ propionate/sodium symporter
Shewanella putrefaciens CN-32 Sputcn32_2469 -60 4.2 AGGTTAGATTTTGATCACATTT
-30 3.8 TAATGGGTTCTTGCTCAAACAT
Shewanella sp W3-18-1 Sputw3181_1539 -60 4.4 ATGTTAGATTTTGATCACATTT
-30 3.8 TAATGGGTTCTTGCTCAAACAT
Shewanella sp ANA-3 Shewana3_1451 -73 3.8 TAATGGGTTCTTGCTCAAACAT
Shewanella sp MR-4 Shewmr4_1398 -73 3.8 TAATGGGTTCTTGCTCAAACAT
Shewanella sp MR-7 Shewmr7_1463 -73 3.8 TAATGGGTTCTTGCTCAAACAT
Shewanella baltica OS155 Sbal_2770 -102 3.8 AGGTTAGATTTTAATCACACTT
Shewanella frigidimarina NCIMB 400 Sfri_2686 -64 4.5 AAGTGTGAACTAGATCGAACTT
Shewanella amazonensis SB2B Sama_2177 -77 3.8 AATTGGGATCCGACCCAAACTT
Shewanella pealeana ATCC 700345 Spea_2608 -104 3.8 TGGTTAGATCTTCATCACATTC
Shewanella halifaxensis HAW-EB4 Shal_2680 -74 3.7 ATTTGAGCCTTGGCTCATAAAT
Shewanella piezotolerans WP3 swp_3151 -72 3.7 ATTATTGAGCTATAGCTCAAAT
-70 4.3 TATTGAGCTATAGCTCAAATAT
Shewanella sediminis HAW-EB3 Ssed_1619 -72 3.9 TATTGAGCTTCCTATCAAACAT
Shewanella woodyi ATCC 51908 Swoo_3036 -86 4.4 GTATATGACCCAGTTCACATTT
Position: -153
Score: 4.2
Sequence: TAGTTTGATTGCCACCACAATA
Locus tag: Sfri_2748
Sfri_2748 -153 4.2 TAGTTTGATTGCCACCACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: etfB
Ortholog function: electron transfer flavoprotein, beta subunit
Shewanella denitrificans OS217 Sden_2539 -175 4.4 TCATATGATTTTCATCACACTT
Shewanella frigidimarina NCIMB 400 Sfri_2748 -153 4.2 TAGTTTGATTGCCACCACAATA
Shewanella pealeana ATCC 700345 Spea_2855 -283 4.1 TATTTGGATAAGGATCAAATAT
Shewanella piezotolerans WP3 swp_3472 -276 3.7 TATTTCAATAAGGATCAAATAT
Shewanella woodyi ATCC 51908 Swoo_3236 -214 4.5 ATTTGTGAATGTACTCATATAT
Position: -313
Score: 4.7
Sequence: AATAGTGAGTATTATCACATTA
Locus tag: Sfri_2778
Sfri_2778 -313 4.7 AATAGTGAGTATTATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1539
Ortholog function: Probable acylaminoacyl-peptidase (EC 3.4.19.1)
Shewanella putrefaciens CN-32 Sputcn32_1287 -127 4.5 AATAGTGAGCGATATCACGATT
Shewanella sp W3-18-1 Sputw3181_2819 -127 4.5 AATAGTGAGCGATATCACGATT
Shewanella sp ANA-3 Shewana3_2889 -127 4.5 AATAGTGAGCAATATCACGATT
Shewanella sp MR-4 Shewmr4_2719 -127 4.5 AATAGTGAGCAATATCACGATT
Shewanella sp MR-7 Shewmr7_2790 -127 4.5 AATAGTGAGCAATATCACGATT
Shewanella baltica OS155 Sbal_1369 -128 4.5 AATAGTGAGCAATATCACGATT
Shewanella frigidimarina NCIMB 400 Sfri_2778 -313 4.7 AATAGTGAGTATTATCACATTA
Shewanella amazonensis SB2B Sama_2422 -183 4.7 TTATGTGATTTATGTCTCGATT
Shewanella loihica PV-4 Shew_2759 -171 4.4 AATAGTGAGCAATCTCACGTTT
Shewanella pealeana ATCC 700345 Spea_2979 -113 4.3 AAGAGTGAGCGATCTCACGTTT
Shewanella halifaxensis HAW-EB4 Shal_3068 -114 4.4 AATAGTGAGCAATCTCACGTTT
Shewanella piezotolerans WP3 swp_3605 -144 4.2 AAAGGTGAGCAATCTCACGTTT
Shewanella sediminis HAW-EB3 Ssed_3317 -103 4.8 AATAGTGAGCAATCTCACATTT
Shewanella woodyi ATCC 51908 Swoo_3465 -159 4.4 AATAGTGAGCAGTCTCACGTTT
Position: -148
Score: 4.7
Sequence: TAATGTGATAATACTCACTATT
Locus tag: Sfri_2779
Sfri_2779 -148 4.7 TAATGTGATAATACTCACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: icd
Ortholog function: Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)
Shewanella oneidensis MR-1 SO1538 -149 4.7 ATTCGTGATATTGCTCACTATT
Shewanella putrefaciens CN-32 Sputcn32_1286 -148 4.7 AATCGTGATATCGCTCACTATT
Shewanella sp W3-18-1 Sputw3181_2820 -148 4.7 AATCGTGATATCGCTCACTATT
Shewanella sp ANA-3 Shewana3_2890 -149 4.7 AATCGTGATATTGCTCACTATT
Shewanella sp MR-4 Shewmr4_2720 -149 4.7 AATCGTGATATTGCTCACTATT
Shewanella sp MR-7 Shewmr7_2791 -149 4.7 AATCGTGATATTGCTCACTATT
Shewanella baltica OS155 Sbal_1368 -149 4.7 AATCGTGATATTGCTCACTATT
Shewanella denitrificans OS217 Sden_2561 -143 3.8 AAAAGGGATATTTCTCACTAAT
Shewanella frigidimarina NCIMB 400 Sfri_2779 -148 4.7 TAATGTGATAATACTCACTATT
Shewanella amazonensis SB2B Sama_2423 -89 4.5 AATCGAGACATAAATCACATAA
Shewanella loihica PV-4 Shew_2760 -150 4.4 AAACGTGAGATTGCTCACTATT
Shewanella pealeana ATCC 700345 Spea_2980 -146 4.2 AAACGTGAGATCGCTCACTCTT
Shewanella halifaxensis HAW-EB4 Shal_3069 -149 4.4 AAACGTGAGATTGCTCACTATT
Shewanella piezotolerans WP3 swp_3606 -293 4.6 AAACGTGAGATTGCTCACCTTT
Shewanella sediminis HAW-EB3 Ssed_3318 -151 4.7 AAATGTGAGATTGCTCACTATT
Shewanella woodyi ATCC 51908 Swoo_3466 -148 4.3 AAACGTGAGACTGCTCACTATT
Position: -298
Score: 4.3
Sequence: TCTAGTGAGCCCCTTCACATTA
Locus tag: Sfri_2793
Sfri_2793 -298 4.3 TCTAGTGAGCCCCTTCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lldP
Ortholog function: L-lactate permease
Shewanella oneidensis MR-1 SO1522 -262 4.6 TTAAGTGACACCGATCACAGTT
-180 4.2 CAAAATGATCTAGATCATATAA
Shewanella sp MR-4 Shewmr4_2734 -263 4.1 TCGAGTGACATAGATCACAGTT
-181 4.2 CAAAATGATCTAGATCATATTA
Shewanella sp MR-7 Shewmr7_2807 -263 4.1 TCGAGTGACATAGATCACAGTT
-181 4.2 CAAAATGATCTAGATCATATTA
Shewanella frigidimarina NCIMB 400 Sfri_2793 -298 4.3 TCTAGTGAGCCCCTTCACATTA
-197 3.7 AAACGTGACCTCAAACACGCAC
Shewanella pealeana ATCC 700345 Spea_2994 -276 4 TTAGGTGACACAGGTCACACCA
-241 4.1 AACCGTGACAGATCTCACAATC
Shewanella halifaxensis HAW-EB4 Shal_3083 -300 4.5 TTACGTGACACGGATCACAGAG
-265 4.5 AACTGTGATCAGTCTCACTAAT
Position: -306
Score: 4.2
Sequence: AAGTGTGATGGATATCACTTGT
Locus tag: Sfri_2897
Sfri_2897 -306 4.2 AAGTGTGATGGATATCACTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3541
Ortholog function: sodium:alanine symporter family protein
Shewanella baltica OS155 Sbal_1047 -220 3.9 AAACGCGAGCTTGATCACATGA
Shewanella denitrificans OS217 Sden_2730 -140 4.6 TAATGTGAACTGGATCACTAAG
Shewanella frigidimarina NCIMB 400 Sfri_2897 -306 4.2 AAGTGTGATGGATATCACTTGT
Shewanella loihica PV-4 Shew_1092 -210 4.4 AACTGTGATCTGTATCACATGG
Shewanella pealeana ATCC 700345 Spea_1077 -207 4.1 AACTGTGATCTATATCGCTCAG
Shewanella piezotolerans WP3 swp_3737 -210 4.5 ATGTGTGATCTGTATCACTCAG
Shewanella sediminis HAW-EB3 Ssed_1187 -214 4.2 AACTGTGATCTGCGTCACATGG
Shewanella woodyi ATCC 51908 Swoo_1283 -215 4.2 AAGTGTGATCGTGATCACGCGA
Position: -233
Score: 4.5
Sequence: ACAAGTGATATCCATCACACTT
Locus tag: Sfri_2898
Sfri_2898 -233 4.5 ACAAGTGATATCCATCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phk
Ortholog function: Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
Shewanella oneidensis MR-1 SO3542 -95 4.2 AATTTGGATGCAGAACACATTT
Shewanella putrefaciens CN-32 Sputcn32_1051 -234 4 TCATGTGATCAAGCCTACATTT
-95 4.1 AATTTGGATGTAGGGCACATTT
Shewanella sp W3-18-1 Sputw3181_3114 -234 4 TCATGTGATCAAGCCTACATTT
-95 4.1 AATTTGGATGTAGGGCACATTT
Shewanella sp ANA-3 Shewana3_3145 -95 4 AATTTGGATGCAGGGCACATTT
Shewanella sp MR-4 Shewmr4_2965 -95 4.3 AATTTGGATGTAGAACACATTT
Shewanella sp MR-7 Shewmr7_3047 -95 4.3 AATTTGGATGTAGAACACATTT
Shewanella baltica OS155 Sbal_1046 -235 4.4 TCATGTGATCAAGCTCGCGTTT
-96 4.1 AATTTGGATGTAGGGCACATTT
Shewanella denitrificans OS217 Sden_2731 -233 5 CTTAGTGATCCAGTTCACATTA
-94 3.7 AAGTTAGATCGGGGACACATTT
Shewanella frigidimarina NCIMB 400 Sfri_2898 -233 4.5 ACAAGTGATATCCATCACACTT
-95 3.8 AAATTAGATAAAGGCCACATTA
Shewanella amazonensis SB2B Sama_0915 -240 4.1 ACTCGTGATCAAGCTCACGGTT
-99 4.1 AATTTGGATGTGGGGCACATTT
Shewanella loihica PV-4 Shew_1091 -238 4.6 CCATGTGATACAGATCACAGTT
-97 4 AAATAAGATATTGAACACATTT
Shewanella pealeana ATCC 700345 Spea_1076 -235 3.9 CTGAGCGATATAGATCACAGTT
Shewanella halifaxensis HAW-EB4 Shal_1124 -56 4.3 TATAGTGAGTTATATAAAATTT
Shewanella piezotolerans WP3 swp_3738 -237 4.5 CTGAGTGATACAGATCACACAT
-96 3.8 AAATAAGATACAGGACACATTT
Shewanella sediminis HAW-EB3 Ssed_1186 -238 4.4 CCATGTGACGCAGATCACAGTT
-97 4.2 AAATAAGATGTAGAACACATTT
Shewanella woodyi ATCC 51908 Swoo_1282 -238 4.4 TCGCGTGATCACGATCACACTT
-97 3.8 AAACAAGATATAGAACACATTT
Position: -77
Score: 5
Sequence: AAGTGTGATGCAGATCACTATT
Locus tag: Sfri_2912
Sfri_2912 -77 5 AAGTGTGATGCAGATCACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfiA-2
Ortholog function: Ribosome hibernation protein YfiA
Shewanella oneidensis MR-1 SO3422 -78 4.7 AAGTGTGATTTAACTCTCGTTT
Shewanella putrefaciens CN-32 Sputcn32_2740 -77 5.1 TTTTGTGATTTAGATCTCGTTT
Shewanella sp W3-18-1 Sputw3181_1272 -77 5.1 TTTTGTGATTTAGATCTCGTTT
Shewanella sp ANA-3 Shewana3_1133 -78 5.1 AAATGTGATTTAGATCTCGTTT
Shewanella sp MR-4 Shewmr4_1132 -78 5.1 AAATGTGATTTAGATCTCGTTT
Shewanella sp MR-7 Shewmr7_1203 -78 5.1 AAATGTGATTTAGATCTCGTTT
Shewanella baltica OS155 Sbal_1221 -77 5.2 AAATGTGATCTAGATCTCGTTT
Shewanella denitrificans OS217 Sden_2746 -77 4.8 AAGTGTGACTTTGATCACGCTT
-38 4.1 TAATCTGAAGTTAAGCACATAA
Shewanella frigidimarina NCIMB 400 Sfri_2912 -77 5 AAGTGTGATGCAGATCACTATT
Shewanella amazonensis SB2B Sama_0899 -78 4.3 AAACGTGATTTTACTCACGACT
Shewanella loihica PV-4 Shew_1073 -76 4.6 AAAGTTGATCTAGATCACGTTT
Shewanella pealeana ATCC 700345 Spea_1060 -76 4.6 AAACGTGATTTAGATCACGACT
Shewanella halifaxensis HAW-EB4 Shal_4284 -83 4.6 AAACATGACCTAGATCACACTA
-58 3.8 TAATGTGATTGGACTATTGTAA
Shewanella halifaxensis HAW-EB4 Shal_1108 -76 4.6 AAACGTGATTTAGATCACGACT
Shewanella piezotolerans WP3 swp_3757 -76 4.6 AAACGTGATTTAGATCACGACT
Shewanella sediminis HAW-EB3 Ssed_1169 -222 3.8 TTTTGAGAGGCAAATAAAAAAA
-76 4.6 AAACGTGATTTAGATCACGACT
Shewanella woodyi ATCC 51908 Swoo_1264 -76 4.5 AAACGTGATCAAGATCACGACT
Position: -158
Score: 4.4
Sequence: TCTATTGATCTAAATCACAAAT
Locus tag: Sfri_2947
Sfri_2947 -158 4.4 TCTATTGATCTAAATCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyaC
Ortholog function: Adenylate cyclase (EC 4.6.1.1)
Shewanella oneidensis MR-1 SO1329 -162 4.7 TGTATTGATCCAGATCACAAAT
Shewanella putrefaciens CN-32 Sputcn32_1140 -101 4.7 TGTATTGATCCAGATCACAAAT
Shewanella sp W3-18-1 Sputw3181_3024 -101 4.7 TGTATTGATCCAGATCACAAAT
Shewanella sp ANA-3 Shewana3_3045 -162 4.4 TGGATTGATCCAGATCACAAAT
Shewanella sp MR-4 Shewmr4_2867 -162 4.4 TGGATTGATCCAGATCACAAAT
Shewanella sp MR-7 Shewmr7_2949 -162 4.4 TGGATTGATCCAGATCACAAAT
Shewanella baltica OS155 Sbal_1182 -101 4.7 TAGATTGATCCAGATCACAAAT
Shewanella denitrificans OS217 Sden_2784 -157 4.8 TGAATTGATCTAGATCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_2947 -158 4.4 TCTATTGATCTAAATCACAAAT
Shewanella amazonensis SB2B Sama_0861 -102 4.2 TGAATTGATTCAGATCACGTTA
Shewanella loihica PV-4 Shew_1036 -162 4.6 TCATTTGACTTAGATCACAAAT
Shewanella pealeana ATCC 700345 Spea_1019 -100 4.6 TCATTTGACTTAGATCACAAAT
Shewanella halifaxensis HAW-EB4 Shal_1065 -99 5.1 TTATTTGACTTAGATCACAAAT
Shewanella piezotolerans WP3 swp_3798 -98 4.6 TCATTTGACTTAGATCACAAAT
Shewanella sediminis HAW-EB3 Ssed_1130 -103 4.3 TCATTTGACAAAGATCACAAAT
Shewanella woodyi ATCC 51908 Swoo_1225 -96 4.3 TCATTTGACTAAGATCACAAAT
Position: -128
Score: 3.9
Sequence: TTTTTTGAGTTTGTGCACAACT
Locus tag: Sfri_2950
Sfri_2950 -128 3.9 TTTTTTGAGTTTGTGCACAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1326
Ortholog function: COG1242: Predicted Fe-S oxidoreductase
Shewanella oneidensis MR-1 SO1326 -294 4.3 AATAGTGATTTTTATTGCAAAT
Shewanella putrefaciens CN-32 Sputcn32_1137 -293 4.3 AATAGTGATTTTTATTGCAAAT
-224 4.6 ATTTGTGAGGTAGATCGCTAAA
Shewanella sp W3-18-1 Sputw3181_3027 -293 4.3 AATAGTGATTTTTATTGCAAAT
-224 4.3 GTTTGTGATGTAGATCGCTAAA
Shewanella sp ANA-3 Shewana3_3048 -294 4.3 AATAGTGATTTTTATTGCAAAT
Shewanella sp MR-4 Shewmr4_2870 -55 4.3 AATAGTGATTTTTATTGCAAAT
Shewanella sp MR-7 Shewmr7_2952 -55 4.3 AATAGTGATTTTTATTGCAAAT
Shewanella baltica OS155 Sbal_1179 -293 3.9 AATAGTGATTTTTATTGCAAAC
-225 4.2 TGATGTGAGCAATATCTCAATG
-193 4.3 TAATTTGAGGATGCGCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_2950 -128 3.9 TTTTTTGAGTTTGTGCACAACT
Shewanella loihica PV-4 Shew_1033 -148 4.4 AAAAGTGATTTTTATTGCATAT
-127 4 TACAGTGAATTATTTAACAAAT
Shewanella pealeana ATCC 700345 Spea_1014 -303 3.9 TAAATTGACCTGTATAACCTTA
-201 4 TAAAGTGATTTTTTTTGCAGAT
Shewanella halifaxensis HAW-EB4 Shal_1062 -210 4 TAAAGTGATTTTTCTTGCAGAT
Shewanella piezotolerans WP3 swp_3802 -111 3.8 TTATTTGAGCTAGCGCTAATAA
Shewanella woodyi ATCC 51908 Swoo_1222 -229 3.8 AAATATGAGTTCTATTGCAAAT
Position: -256
Score: 5
Sequence: TTTGGTGACATAGATCACATAT
Locus tag: Sfri_3097
Sfri_3097 -256 5 TTTGGTGACATAGATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadD-2
Ortholog function: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Shewanella putrefaciens CN-32 Sputcn32_0970 -118 4.6 CGTTGTGATGTTTTTCACGATA
Shewanella sp W3-18-1 Sputw3181_3197 -117 4.6 CGTTGTGATGTTTTTCACGATA
Shewanella frigidimarina NCIMB 400 Sfri_3097 -256 5 TTTGGTGACATAGATCACATAT
Shewanella piezotolerans WP3 swp_3965 -222 3.7 ATGCGCGATTTGCATTACCTTT
Shewanella sediminis HAW-EB3 Ssed_3695 -135 5.4 TAATGTGATCTATTTCTCATAT
Shewanella woodyi ATCC 51908 Swoo_3995 -147 3.7 AACCATGATCTATTTCGTAATT
Position: -45
Score: 4.2
Sequence: AATTTAGATCTATGTCACAAAC
Locus tag: Sfri_3173
Sfri_3173 -45 4.2 AATTTAGATCTATGTCACAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mdh
Ortholog function: malate dehydrogenase (EC 1.1.1.37)
Shewanella oneidensis MR-1 SO0770 -47 4.3 AAATTAGATCCATGTCACACAT
Shewanella putrefaciens CN-32 Sputcn32_3219 -46 4 AAACTAGATCCATGTCACACAT
Shewanella sp W3-18-1 Sputw3181_0722 -46 4 AAACTAGATCCATGTCACACAT
Shewanella sp ANA-3 Shewana3_3509 -46 4.3 AAATTAGATCCATGTCACACAT
Shewanella sp MR-4 Shewmr4_3339 -46 4.3 AAATTAGATCCATGTCACACAT
Shewanella sp MR-7 Shewmr7_0614 -46 4.3 AAATTAGATCCATGTCACACAT
Shewanella baltica OS155 Sbal_0609 -46 4.3 AAATTAGATCCATGTCACACAT
Shewanella frigidimarina NCIMB 400 Sfri_3173 -45 4.2 AATTTAGATCTATGTCACAAAC
Shewanella amazonensis SB2B Sama_0672 -46 3.8 TTTGAGGATCTACCTCACAAAT
Shewanella loihica PV-4 Shew_0867 -47 4.5 AATCTAGATCTATATCACATAA
Shewanella halifaxensis HAW-EB4 Shal_0903 -46 3.9 AAGATGGATCTGAATCACAAAA
Shewanella piezotolerans WP3 swp_4100 -46 3.9 AAAACAGATCTAAATCACAAAA
Shewanella sediminis HAW-EB3 Ssed_0952 -136 4.1 TTTATTGATGTAGAACAAAAAT
Shewanella woodyi ATCC 51908 Swoo_1002 -47 3.8 AATGTAGACCTACATCACAAAA
Position: -37
Score: 4.2
Sequence: ATATTTGAACATGGTCAAATAT
Position: -7
Score: 4.1
Sequence: AAATGTGATGGAGTTAGTATCT
Locus tag: Sfri_3188
Sfri_3188 -37 4.2 ATATTTGAACATGGTCAAATAT
-7 4.1 AAATGTGATGGAGTTAGTATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cobA
Ortholog function: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Shewanella sp ANA-3 Shewana3_0862 -248 4.2 TTATGTGAGCTGATGCAAGTTT
Shewanella sp MR-4 Shewmr4_3073 -248 4.2 TTATGTGAGGTGACGCAAGTTT
Shewanella sp MR-7 Shewmr7_0899 -248 4.2 TTATGTGAGCTGATGCAAGTTT
Shewanella frigidimarina NCIMB 400 Sfri_3188 -37 4.2 ATATTTGAACATGGTCAAATAT
-7 4.1 AAATGTGATGGAGTTAGTATCT
Shewanella pealeana ATCC 700345 Spea_0662 -148 4.1 CAATGTGTTGCATGGCACATAA
Shewanella piezotolerans WP3 swp_4059 -119 4.3 TTTTATGATATGCATCACCTCA
Position: -251
Score: 4.5
Sequence: ATATTTGACCATGTTCAAATAT
Locus tag: Sfri_3189
Sfri_3189 -251 4.5 ATATTTGACCATGTTCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: swp_4060
Ortholog function: phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); outer membrane phospholipase A
Shewanella sp ANA-3 Shewana3_0861 -204 4 AAACTTGCATCAGCTCACATAA
Shewanella sp MR-4 Shewmr4_3074 -203 3.9 AAACTTGCGTCACCTCACATAA
Shewanella sp MR-7 Shewmr7_0898 -204 4 AAACTTGCATCAGCTCACATAA
Shewanella frigidimarina NCIMB 400 Sfri_3189 -251 4.5 ATATTTGACCATGTTCAAATAT
Shewanella loihica PV-4 Shew_0671 -217 4 AATAGTGATGAGGTTAATATAG
Shewanella pealeana ATCC 700345 Spea_0661 -283 4.1 TTATGTGCCATGCAACACATTG
Shewanella halifaxensis HAW-EB4 Shal_3535 -147 3.9 AAATATGAGCTTGTTCCAAATT
Shewanella halifaxensis HAW-EB4 Shal_2004 -157 4.3 TAATGTGATTTTCAGAATAATT
Shewanella piezotolerans WP3 swp_4060 -318 4.3 TGAGGTGATGCATATCATAAAA
Position: -214
Score: 4.2
Sequence: TATTGTGTTGCAATTAACAATG
Position: -104
Score: 5
Sequence: AAATGTGAATCAGATAACATTT
Locus tag: Sfri_3213
Sfri_3213 -214 4.2 TATTGTGTTGCAATTAACAATG
-104 5 AAATGTGAATCAGATAACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cydD
Ortholog function: Transport ATP-binding protein CydD
Shewanella oneidensis MR-1 SO3780 -191 4.4 TTTATTGATCAGCATCGCATTT
Shewanella putrefaciens CN-32 Sputcn32_3106 -169 4.7 TTTTGTGAATCGGTTAACAAAA
Shewanella sp W3-18-1 Sputw3181_0838 -169 4.7 TTTTGTGAATCGGTTAACAAAA
Shewanella sp ANA-3 Shewana3_0812 -187 4.4 TTTATTGATCTTTATCTCATTT
-167 4.5 TTTTGTGAATAGGCTAACAAAA
Shewanella sp MR-4 Shewmr4_3127 -187 4.4 TTTATTGATCTTTATCTCATTT
-167 4.5 TTTTGTGAATAGGCTAACAAAA
Shewanella sp MR-7 Shewmr7_0840 -187 4.4 TTTATTGATCTTTATCTCATTT
-167 4.5 TTTTGTGAATAGGCTAACAAAA
Shewanella baltica OS155 Sbal_3463 -170 4.3 TTTTGTGAGTCTGCTAGCAAAA
Shewanella frigidimarina NCIMB 400 Sfri_3213 -214 4.2 TATTGTGTTGCAATTAACAATG
-104 5 AAATGTGAATCAGATAACATTT
Shewanella amazonensis SB2B Sama_2679 -137 4.2 TTTTTTGATCCAGCGCAAATTC
-118 4.2 TTCTGTGAATCCCCTAACAAAT
Shewanella loihica PV-4 Shew_0613 -129 4.5 TTTTTTGATCTAGCTCAATTTT
-110 4.8 TTTTGTGAGCCTAATAACAATT
Shewanella pealeana ATCC 700345 Spea_3494 -185 4.1 TTTATTGATCTAGCTCAATTTT
-166 4.4 TTTTGTGAGTCCGATAGCAAAT
Shewanella halifaxensis HAW-EB4 Shal_3589 -233 4.1 TTTATTGATCTAGCTCAATTTT
-214 4.9 TTTTGTGAGTCCGATAACATTT
Shewanella sediminis HAW-EB3 Ssed_3849 -139 4.1 AAAATTGATCTAGCTCAATTTT
-120 4.7 TTTTGTGAATCCGTTAACAATT
Shewanella woodyi ATCC 51908 Swoo_0710 -149 4.1 TTTATTGATCTAGCTCAATTTT
-130 4.7 TTTTGTGAATCTCTTAACATTT
Position: -222
Score: 4.1
Sequence: AACTTTGATAGAGATCGTATTT
Position: -147
Score: 4.3
Sequence: ATTTGTGATGACGGTCGACTTT
Position: -38
Score: 4
Sequence: TTATTTAATCAGCTTCATAAAT
Locus tag: Sfri_3291
Sfri_3291 -222 4.1 AACTTTGATAGAGATCGTATTT
-147 4.3 ATTTGTGATGACGGTCGACTTT
-38 4 TTATTTAATCAGCTTCATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sel1
Ortholog function: Sel1 domain protein repeat-containing protein precursor
Shewanella oneidensis MR-1 SO0625 -267 4.2 TTTAGTGATATTAGTCAACTAA
Shewanella putrefaciens CN-32 Sputcn32_0653 -270 4.2 TTTAGTGATATTAGTCAACTAA
Shewanella sp W3-18-1 Sputw3181_3521 -270 4.2 TTTAGTGATATTAGTCAACTAA
Shewanella sp ANA-3 Shewana3_0618 -270 4.2 TTTAGTGATATTAGTCAACTAA
Shewanella sp MR-4 Shewmr4_0619 -270 4.2 TTTAGTGATATTAGTCAACTAA
Shewanella sp MR-7 Shewmr7_3411 -270 4.2 TTTAGTGATATTAGTCAACTAA
Shewanella baltica OS155 Sbal_0579 -278 4.4 TTTAGTGATTTAAGTCAACTAA
Shewanella frigidimarina NCIMB 400 Sfri_3291 -222 4.1 AACTTTGATAGAGATCGTATTT
-147 4.3 ATTTGTGATGACGGTCGACTTT
-38 4 TTATTTAATCAGCTTCATAAAT
Shewanella amazonensis SB2B Sama_3003 -319 3.8 AACCATGATGCAGATCGAAATT
Shewanella loihica PV-4 Shew_0586 -279 3.8 ATTAGTAATATATGTCAACTAA
Shewanella piezotolerans WP3 swp_0756 -153 3.8 TTTTTTGAACCTTATCAATAAA
Shewanella sediminis HAW-EB3 Ssed_3872 -296 4.3 ATTAGTGATATAAGTCAACTAA
Shewanella woodyi ATCC 51908 Swoo_0663 -298 4.3 ATTAGTGATATAAGTCAACTAA
Position: -281
Score: 3.9
Sequence: ATTTATGAAGCTGATTAAATAA
Position: -172
Score: 3.7
Sequence: AAAGTCGACCGTCATCACAAAT
Position: -154
Score: 3.6
Sequence: AAATGAGATAAATTTAATCTTA
Position: -97
Score: 4
Sequence: AAATACGATCTCTATCAAAGTT
Locus tag: Sfri_3292
Sfri_3292 -281 3.9 ATTTATGAAGCTGATTAAATAA
-172 3.7 AAAGTCGACCGTCATCACAAAT
-154 3.6 AAATGAGATAAATTTAATCTTA
-97 4 AAATACGATCTCTATCAAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: crp
Ortholog function: Cyclic AMP receptor protein Crp
Shewanella oneidensis MR-1 SO0624 -174 3.5 TTAGTTGACTAATATCACTAAA
Shewanella putrefaciens CN-32 Sputcn32_0652 -174 3.5 TTAGTTGACTAATATCACTAAA
Shewanella sp W3-18-1 Sputw3181_3522 -174 3.5 TTAGTTGACTAATATCACTAAA
Shewanella sp ANA-3 Shewana3_0617 -174 3.5 TTAGTTGACTAATATCACTAAA
Shewanella sp MR-4 Shewmr4_0618 -174 3.5 TTAGTTGACTAATATCACTAAA
Shewanella sp MR-7 Shewmr7_3412 -174 3.5 TTAGTTGACTAATATCACTAAA
Shewanella baltica OS155 Sbal_0578 -174 3.7 TTAGTTGACTTAAATCACTAAA
Shewanella denitrificans OS217 Sden_3190 -94 3.6 AAACACGATCTTGGTCAAAGTT
Shewanella frigidimarina NCIMB 400 Sfri_3292 -97 4 AAATACGATCTCTATCAAAGTT
Shewanella amazonensis SB2B Sama_3004 -96 3.8 AATTTCGATCTGCATCATGGTT
Shewanella loihica PV-4 Shew_0585 -238 4 AGATGTGATATGGGCAACATTG
Shewanella pealeana ATCC 700345 Spea_3509 -225 3.6 AGATGTGATATAAGCCTAATTG
Shewanella halifaxensis HAW-EB4 Shal_3603 -226 3.5 AGATGTGATACAAGCCTAATTG
Shewanella piezotolerans WP3 swp_0755 -309 4.2 TTTATTGATAAGGTTCAAAAAA
Shewanella sediminis HAW-EB3 Ssed_3873 -173 3.8 TTAGTTGACTTATATCACTAAT
Shewanella woodyi ATCC 51908 Swoo_0662 -173 3.8 TTAGTTGACTTATATCACTAAT
Position: -302
Score: 3.9
Sequence: ATATGTGTAATTATTCACTTTT
Position: -137
Score: 4.1
Sequence: AACTGGTATTTTGATCACATTT
Locus tag: Sfri_3299
Sfri_3299 -302 3.9 ATATGTGTAATTATTCACTTTT
-137 4.1 AACTGGTATTTTGATCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: astC
Ortholog function: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Shewanella oneidensis MR-1 SO0617 -142 4 AACTGGTATTTTGATCACAATT
Shewanella putrefaciens CN-32 Sputcn32_0645 -142 4.1 AACTGGTATTTTGATCACATTT
Shewanella sp W3-18-1 Sputw3181_3529 -142 4.1 AACTGGTATTTTGATCACATTT
Shewanella sp ANA-3 Shewana3_0610 -142 4 AACTGGTATTTTGATCACAATT
Shewanella sp MR-4 Shewmr4_0611 -142 4 AACTGGTATTTTGATCACAATT
Shewanella sp MR-7 Shewmr7_3419 -308 3.8 AATTGTGTAGTTATTCATATTC
Shewanella baltica OS155 Sbal_0571 -142 4.1 AACTGGTATTTTGATCACATTT
Shewanella denitrificans OS217 Sden_3193 -136 4.1 AACTGGTATTTTGATCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_3299 -137 4.1 AACTGGTATTTTGATCACATTT
Shewanella amazonensis SB2B Sama_3011 -142 4 AACTGGTATTTCGATCACAATT
Shewanella loihica PV-4 Shew_0578 -140 3.8 AACTGGTATTTTGATCACGTTT
Shewanella pealeana ATCC 700345 Spea_3516 -138 4.1 AACTGGTATTTTGATCACATTT
Shewanella halifaxensis HAW-EB4 Shal_3610 -138 3.7 AACTGGCATTCTGATCACATTT
Shewanella piezotolerans WP3 swp_0747 -140 4.1 AACTGGTATTTTGATCACATTT
Shewanella sediminis HAW-EB3 Ssed_0809 -141 4.1 AACTGGTATTTTGATCACATTT
-121 3.9 TTTCGTTATTAATGTCACTTAA
Shewanella woodyi ATCC 51908 Swoo_0655 -172 4.3 ATATGTGCTGCTGATCTTATTT
Position: -129
Score: 3.8
Sequence: CACTATGATCTGGTTCTAATTT
Locus tag: Sfri_3307
Sfri_3307 -129 3.8 CACTATGATCTGGTTCTAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: petA
Ortholog function: ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)
Shewanella oneidensis MR-1 SO0608 -132 3.7 CACTATGATCTGCTTCTAATTT
-103 3.7 TAATGAGCCCCGCTTCAAACTT
Shewanella putrefaciens CN-32 Sputcn32_3276 -130 3.7 CACTATGATCTGCTTCTAATTT
-101 3.7 TAATGAGCCCCGCTTCAAACTT
Shewanella sp W3-18-1 Sputw3181_0665 -130 3.7 CACTATGATCTGCTTCTAATTT
-101 3.7 TAATGAGCCCCGCTTCAAACTT
Shewanella sp ANA-3 Shewana3_0601 -132 3.7 CACTATGATCTGCTTCTAATTT
-103 3.7 TAATGAGCCCCGCTTCAAACTT
Shewanella sp MR-4 Shewmr4_0602 -132 3.7 CACTATGATCTGCTTCTAATTT
-103 3.7 TAATGAGCCCCGCTTCAAACTT
Shewanella sp MR-7 Shewmr7_3428 -132 3.7 CACTATGATCTGCTTCTAATTT
-103 3.7 TAATGAGCCCCGCTTCAAACTT
Shewanella baltica OS155 Sbal_0562 -131 3.7 CACTATGATCTGCTTCTAATTT
-102 3.7 TAATGAGCCCCGCTTCAAACTT
Shewanella frigidimarina NCIMB 400 Sfri_3307 -129 3.8 CACTATGATCTGGTTCTAATTT
Shewanella loihica PV-4 Shew_0570 -130 4.1 TACTATGATCTGCTTCTAATTT
-101 3.9 TAATGAGCCCCGCCTCAAATTT
Shewanella pealeana ATCC 700345 Spea_3536 -78 4.2 AACTATGATCTGGTTCTAATTT
Shewanella halifaxensis HAW-EB4 Shal_3630 -128 4.6 AACTATGATCTGGCTCAAATTT
Shewanella piezotolerans WP3 swp_0793 -131 4.2 AACTATGATCTGGTTCTAATTT
Shewanella sediminis HAW-EB3 Ssed_0801 -132 4.4 TACTATGATCAAGCTCAAATTT
Shewanella woodyi ATCC 51908 Swoo_4166 -129 3.8 TACTATGATCTGCTTCTGATTT
Position: -160
Score: 4.3
Sequence: ATAAGTGATCTAGTACTCACTT
Position: -99
Score: 4.2
Sequence: AAACATGATCTGGTTCAAATCA
Locus tag: Sfri_3316
Sfri_3316 -160 4.3 ATAAGTGATCTAGTACTCACTT
-99 4.2 AAACATGATCTGGTTCAAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sden_3210
Ortholog function: hypothetical protein
Shewanella denitrificans OS217 Sden_3210 -122 4.3 AAGCGTGAACAGCATCACGTAA
Shewanella frigidimarina NCIMB 400 Sfri_3316 -160 4.3 ATAAGTGATCTAGTACTCACTT
-99 4.2 AAACATGATCTGGTTCAAATCA
Shewanella amazonensis SB2B Sama_3031 -165 3.9 TAGAGTGATCCTCTGCAAAGAA
-104 4.8 AATTATGATGCAATTCAAATAA
Shewanella loihica PV-4 Shew_0560 -99 4.1 AACTATGACATTGTTCAAAAAA
Shewanella pealeana ATCC 700345 Spea_3546 -105 4.3 AAGTTTGACTGCGTTCAAATAA
Shewanella halifaxensis HAW-EB4 Shal_3640 -165 3.8 TTACGTGATCGAGCGCTAGTTT
-104 4.3 AAGTTTGACAGTGTTCAAATAT
Shewanella sediminis HAW-EB3 Ssed_0791 -164 3.8 AAGTGTGATCTGACGCCGATTT
-103 3.9 AACTTTGAACTTGTTCAAGTAT
Shewanella woodyi ATCC 51908 Swoo_4177 -44 4.5 AAGTTTGAGCTTGTTCAAATAT
Position: -275
Score: 3.9
Sequence: TAATCTGATCCGGCTAACACCT
Position: -253
Score: 3.8
Sequence: AATATTAACCGCTTTCACAAAT
Locus tag: Sfri_3324
Sfri_3324 -275 3.9 TAATCTGATCCGGCTAACACCT
-253 3.8 AATATTAACCGCTTTCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: bacterioferritin-associated ferredoxin
Shewanella putrefaciens CN-32 Sputcn32_3295 -125 4 AAATGTGCGCAGAGTAACAAAT
Shewanella sp W3-18-1 Sputw3181_0646 -125 4 AAATGTGCGCAGAGTAACAAAT
Shewanella sp ANA-3 Shewana3_0581 -113 4.1 AAATGTGCGATGAGTAACAAAA
Shewanella sp MR-4 Shewmr4_0582 -113 4.1 AAATGTGCGATGAGTAACAAAA
Shewanella sp MR-7 Shewmr7_3448 -113 4.1 AAATGTGCGATGAGTAACAAAA
Shewanella baltica OS155 Sbal_0542 -113 3.9 AAACGTGCGCCATGTAACAAAA
Shewanella frigidimarina NCIMB 400 Sfri_3324 -275 3.9 TAATCTGATCCGGCTAACACCT
-253 3.8 AATATTAACCGCTTTCACAAAT
Shewanella amazonensis SB2B Sama_3040 -99 4.1 AAGTGAGAAATAGCTCACCTAT
Shewanella pealeana ATCC 700345 Spea_3555 -98 3.9 TTAGGCGATCCGACTAACAATT
Position: -287
Score: 3.7
Sequence: CATAGTGATATTCGTTAAAATT
Position: -243
Score: 3.7
Sequence: CTTTATGCGTTGCATCACACTA
Locus tag: Sfri_3402
Sfri_3402 -287 3.7 CATAGTGATATTCGTTAAAATT
-243 3.7 CTTTATGCGTTGCATCACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4131
Ortholog function: nucleoside-binding outer membrane protein
Shewanella oneidensis MR-1 SO4131 -199 4.1 TTATGTGATTTTCACAACAACA
-157 3.8 AATTGTAAATTTTTGCATATAT
Shewanella putrefaciens CN-32 Sputcn32_0544 -198 4.2 TTATGTGATTTTGACAACAACA
-157 4.4 AAATGTGAATTTTTGCATATAT
Shewanella sp W3-18-1 Sputw3181_3628 -198 4.2 TTATGTGATTTTGACAACAACA
-157 4.4 AAATGTGAATTTTTGCATATAT
Shewanella sp ANA-3 Shewana3_3679 -199 4.1 TTATGTGATTTTCACAACAACA
-157 3.8 AATTGTAAATTTTTGCATATAT
Shewanella sp MR-4 Shewmr4_3504 -199 4.1 TTATGTGATTTTCACAACAACA
-157 3.8 AATTGTAAATTTTTGCATATAT
Shewanella sp MR-7 Shewmr7_0448 -199 4.1 TTATGTGATTTTCACAACAACA
-157 3.8 AATTGTAAATTTTTGCATATAT
Shewanella baltica OS155 Sbal_3851 -198 4.2 TTATGTGATTTTGACAACAACA
-157 3.8 AAATGTAAATTTTTGCATATAT
Shewanella denitrificans OS217 Sden_3073 -165 3.8 ATATGTCAACAATTTCATATTT
Shewanella frigidimarina NCIMB 400 Sfri_3402 -287 3.7 CATAGTGATATTCGTTAAAATT
-243 3.7 CTTTATGCGTTGCATCACACTA
Shewanella loihica PV-4 Shew_3389 -217 3.9 AAATGTGACACAGGCAACAAAC
Position: -244
Score: 4.7
Sequence: TAACTTGATGTAAATCACGTTA
Position: -92
Score: 4.8
Sequence: ATATGTGATCAAGTTAACCTTA
Locus tag: Sfri_3403
Sfri_3403 -244 4.7 TAACTTGATGTAAATCACGTTA
-92 4.8 ATATGTGATCAAGTTAACCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: udp
Ortholog function: Uridine phosphorylase (EC 2.4.2.3)
Shewanella oneidensis MR-1 SO4133 -92 4.1 TTCTGTGATCAAGTTAACCTTC
Shewanella putrefaciens CN-32 Sputcn32_0543 -230 4.4 AAGTTAGATCTGGTTCACACTT
-92 4.1 TTCTGTGATCAAGTTAACCTTC
Shewanella sp W3-18-1 Sputw3181_3629 -230 4.4 AAGTTAGATCTGGTTCACACTT
-92 4.1 TTCTGTGATCAAGTTAACCTTC
Shewanella sp ANA-3 Shewana3_3680 -92 4.1 TTCTGTGATCAAGTTAACCTTC
Shewanella sp MR-4 Shewmr4_3505 -92 4.1 TTCTGTGATCAAGTTAACCTTC
Shewanella sp MR-7 Shewmr7_0447 -92 4.1 TTCTGTGATCAAGTTAACCTTC
Shewanella baltica OS155 Sbal_3852 -229 3.8 GATTAGGATCTGGTTCACACTT
-92 4.1 TTCTGTGATCAAGTTAACCTTC
Shewanella denitrificans OS217 Sden_3074 -92 4.4 AACTGTGATGAAGTTAACCAAA
Shewanella frigidimarina NCIMB 400 Sfri_3403 -244 4.7 TAACTTGATGTAAATCACGTTA
-92 4.8 ATATGTGATCAAGTTAACCTTA
Shewanella amazonensis SB2B Sama_0412 -92 4.7 ATTCGTGATCCAGTTAACCTTA
Shewanella loihica PV-4 Shew_3390 -92 4.6 AAGTGTGATCAGGTTAACCTTA
Shewanella pealeana ATCC 700345 Spea_0460 -92 4.7 AAGTGTGATCGGCTTAACCTTT
Shewanella halifaxensis HAW-EB4 Shal_0535 -92 4.6 AAGTGTGATCAGTTTAACCTTT
Shewanella piezotolerans WP3 swp_4702 -310 4.7 ATTTGTGAGTTAGATCATGTTT
-92 4.6 AAGTGTGATCAGGTTAACCTTA
Shewanella sediminis HAW-EB3 Ssed_0461 -92 4.7 AAGTGTGATCGAGCTAACCTTT
Shewanella sediminis HAW-EB3 Ssed_2504 -84 3.9 CAATGTAATATGCAAAACATTT
Shewanella woodyi ATCC 51908 Swoo_4509 -272 4.9 AAATGTGATGTGGGTCAACAAA
-92 4.7 AAGTGTGATCAAGTTAACCTTA
Position: -219
Score: 4.7
Sequence: TAACGTGATTTACATCAAGTTA
Locus tag: Sfri_3404
Sfri_3404 -219 4.7 TAACGTGATTTACATCAAGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4134
Ortholog function: Protein of unknown function DUF465
Shewanella oneidensis MR-1 SO4134 -91 4.7 AATATTGATCCAGATCACGTTT
Shewanella putrefaciens CN-32 Sputcn32_0542 -89 4.7 AATATTGATCTAAGTCACAATT
Shewanella sp W3-18-1 Sputw3181_3630 -89 4.7 AATATTGATCTAAGTCACAATT
Shewanella sp ANA-3 Shewana3_3681 -91 4.6 AATATTGATCCATATCACGTTT
Shewanella sp MR-4 Shewmr4_3506 -205 4 AAGTGTGAGCCAGATCTAACTC
-91 4.6 AATATTGATCCAAATCACGTTT
Shewanella sp MR-7 Shewmr7_0446 -205 4 AAGTGTGAGCCAGATCTAACTC
-91 4.6 AATATTGATCCAAATCACGTTT
Shewanella baltica OS155 Sbal_3853 -206 3.8 AAGTGTGAACCAGATCCTAATC
-92 5 AAGAGTGATCTAAGTCACATTT
Shewanella frigidimarina NCIMB 400 Sfri_3404 -219 4.7 TAACGTGATTTACATCAAGTTA
-81 3.8 CATTGTTATTGGAATAACATCT
Shewanella amazonensis SB2B Sama_0411 -89 4.5 CTTAGTGATCCGGATCACTTTT
Shewanella pealeana ATCC 700345 Spea_0459 -99 4.9 CTATTTGATCGATATCACATTT
Shewanella halifaxensis HAW-EB4 Shal_0534 -97 4.6 CAATTTGATCGATATCACGTTT
Shewanella piezotolerans WP3 swp_4703 -306 4 TAAGGTTAACCTGATCACACTT
-88 4.8 AAACATGATCTAACTCACAAAT
Position: -237
Score: 4.2
Sequence: CATTGTGATCAATGTCATATCA
Locus tag: Sfri_3510
Sfri_3510 -237 4.2 CATTGTGATCAATGTCATATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0572
Ortholog function: enoyl-CoA hydratase (EC 4.2.1.17)
Shewanella oneidensis MR-1 SO0572 -102 4.4 TATTTTGACTCAAGTCAAAATT
Shewanella putrefaciens CN-32 Sputcn32_3304 -102 4.3 TATTTTGACTAAGGTCAAAATT
Shewanella sp W3-18-1 Sputw3181_0637 -102 4.3 TATTTTGACTAAGGTCAAAATT
Shewanella sp ANA-3 Shewana3_0572 -102 4.4 TATTTTGACTCATGTCAAAAAT
Shewanella sp MR-4 Shewmr4_0573 -102 4.5 TATTTTGACGCATGTCAAAATT
Shewanella sp MR-7 Shewmr7_3457 -102 4.5 TATTTTGACGCATGTCAAAATT
Shewanella baltica OS155 Sbal_0533 -102 4.3 TATTTTGACTCAAGTCAAAAAA
Shewanella denitrificans OS217 Sden_0534 -100 3.7 ATTTTTGACTAGGGTCAATATT
Shewanella frigidimarina NCIMB 400 Sfri_3510 -237 4.2 CATTGTGATCAATGTCATATCA
Shewanella loihica PV-4 Shew_0454 -124 4.3 TATTTTGACGCCAGTCAAAAAA
Shewanella pealeana ATCC 700345 Spea_3709 -110 3.7 AAAAATGACCAATGTCATAATT
Shewanella halifaxensis HAW-EB4 Shal_3794 -110 3.9 TAAAATGATGAGTGTCATAATT
Shewanella piezotolerans WP3 swp_0563 -110 3.6 TTTATTGACGATAGTCAAAAAA
Shewanella sediminis HAW-EB3 Ssed_0623 -108 4.1 TTTTTTGACTGAAGTCAAACTT
Position: -200
Score: 4
Sequence: ATATTTGATCACAAGCACACTC
Locus tag: Sfri_3534
Sfri_3534 -200 4 ATATTTGATCACAAGCACACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0543
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO0543 -192 3.7 CGTTATGCGCTAAATCACAAAA
Shewanella putrefaciens CN-32 Sputcn32_3331 -88 4.2 ATTTTTACTCTAATTCACAAAA
Shewanella sp W3-18-1 Sputw3181_0610 -88 4.2 ATTTTTACTCTAATTCACAAAA
Shewanella sp ANA-3 Shewana3_0541 -193 4.1 AGTTATGCGCTAAATCACAAAA
Shewanella sp MR-4 Shewmr4_0542 -192 4 AGTTATGCGCTTAATCACAAAA
Shewanella sp MR-7 Shewmr7_3488 -191 4 AGTTATGCGCTTAATCACAAAA
Shewanella baltica OS155 Sbal_0501 -201 4.8 TGTTGTGCTCTCAATCACAAAA
-88 3.9 AATTTTACCCTGATTCACAAAA
Shewanella denitrificans OS217 Sden_0657 -34 3.9 TAATATGACTAGAGTCAAACAT
Shewanella frigidimarina NCIMB 400 Sfri_3534 -200 4 ATATTTGATCACAAGCACACTC
Shewanella amazonensis SB2B Sama_3164 -240 3.9 CATTGTTACTCACTTCATACAT
-126 3.9 ATTTATGACCATACTCACAGAG
Shewanella loihica PV-4 Shew_0428 -190 4.2 TAGTGTTAACTCGATCAAACAA
Shewanella pealeana ATCC 700345 Spea_3733 -197 4.2 TTTTGCTACATAGATCGCATAT
Shewanella halifaxensis HAW-EB4 Shal_3818 -235 4.7 TTTTGTTACATGGATCGCATAT
Shewanella piezotolerans WP3 swp_0532 -156 4.6 TTTTGTTACACAGATCGCATAT
Shewanella sediminis HAW-EB3 Ssed_0598 -213 4.2 TAATGTTAAATCGATCTCACTT
Shewanella woodyi ATCC 51908 Swoo_4355 -215 3.8 AATTGCTAGATAGATCTCACTT
Position: -112
Score: 4
Sequence: GGATATGATCTACTTCAAATTA
Locus tag: Sfri_3554
Sfri_3554 -112 4 GGATATGATCTACTTCAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4142
Ortholog function: cytochrome c family protein
Shewanella oneidensis MR-1 SO4142 -121 3.9 GAAAGTGACACACCTCAAATAA
Shewanella sp ANA-3 Shewana3_3688 -118 4.2 GAAAGTGATACACCTCAAATAA
Shewanella sp MR-4 Shewmr4_3511 -118 4.2 GAAAGTGATACACCTCAAATAA
Shewanella sp MR-7 Shewmr7_0441 -122 4 GAAGGTGATACACCTCAAATAA
Shewanella frigidimarina NCIMB 400 Sfri_3554 -112 4 GGATATGATCTACTTCAAATTA
Shewanella amazonensis SB2B Sama_3178 -268 3.9 AAACGTCACATAGATCACACAC
Shewanella loihica PV-4 Shew_0516 -113 4.1 GAAGGTGATCAACATCAAATTT
Shewanella halifaxensis HAW-EB4 Shal_0616 -289 3.8 AAGTGTGATCTAGATCTGTTAC
Shewanella piezotolerans WP3 swp_4577 -133 4 GAAAGTGATCGAGCTCAACTAT
Shewanella sediminis HAW-EB3 Ssed_4058 -112 4.7 AAAGGTGATCAACATCAAATTT
Position: -307
Score: 4.4
Sequence: AGTCGCGATCTACATCAAATAA
Locus tag: Sfri_3603
Sfri_3603 -307 4.4 AGTCGCGATCTACATCAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1821
Ortholog function: outer membrane porin, putative
Shewanella putrefaciens CN-32 Sputcn32_1515 -140 4.4 TTTTGTGATGTTAATCTACATA
Shewanella sp W3-18-1 Sputw3181_2585 -140 4.4 TTTTGTGATGTTAATCTACATA
Shewanella sp ANA-3 Shewana3_2628 -140 4.4 TTTTGTGATGTTTCTCTACATA
Shewanella sp MR-4 Shewmr4_2468 -140 4.4 TTTTGTGATGTTTCTCTACATA
Shewanella sp MR-7 Shewmr7_2536 -140 4.4 TTTTGTGATGTTTCTCTACATA
Shewanella baltica OS155 Sbal_1631 -143 4.5 TTTTGTGATGTTAATCGACATA
Shewanella frigidimarina NCIMB 400 Sfri_3603 -307 4.4 AGTCGCGATCTACATCAAATAA
-140 4.2 TTATATGAGATATATCGCCTTT
Shewanella amazonensis SB2B Sama_1251 -168 3.9 TTATCTGATAGAGATTTCAATT
-140 4.5 TGTTGTGATTTTTAACACGTTT
Position: -125
Score: 4
Sequence: GAAGGTGATGTGGCTCATAAAA
Locus tag: Sfri_3609
Sfri_3609 -125 4 GAAGGTGATGTGGCTCATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Shewanella oneidensis MR-1 SO1363 -124 4.2 TAAAGTGATCTTTCTCTAAGAT
Shewanella putrefaciens CN-32 Sputcn32_1174 -124 4.3 TAAGGTGATAACCCTCGCAAAT
Shewanella sp W3-18-1 Sputw3181_2990 -124 4.3 TAAGGTGATAACCCTCGCAAAT
Shewanella sp MR-4 Shewmr4_2832 -124 4 TAAGGTGATCTCCCTCTAAGAT
Shewanella sp MR-7 Shewmr7_2914 -124 3.6 CAAGGTGATCTCTCTCTAAGAT
Shewanella baltica OS155 Sbal_1216 -124 4.1 TAAGGTGATCGTTCTCTAATAT
Shewanella frigidimarina NCIMB 400 Sfri_3609 -125 4 GAAGGTGATGTGGCTCATAAAA
Shewanella amazonensis SB2B Sama_0895 -113 3.6 TAAGATGATCTGCTTCAAGGAA
Shewanella loihica PV-4 Shew_1069 -125 4.5 TAATTTGATCCGCTTCATAGTT
Shewanella pealeana ATCC 700345 Spea_1055 -125 4.5 AAAAGTGATCTCTTTCATAGTT
Shewanella halifaxensis HAW-EB4 Shal_1103 -96 4.3 TAAGGTGATCTCTTTCATGTTT
Shewanella piezotolerans WP3 swp_3762 -42 4.4 TAAGGTGATCTCTTTCATAGTT
Shewanella sediminis HAW-EB3 Ssed_1165 -170 3.4 TAATGCAATTGGTATTATAATT
Shewanella woodyi ATCC 51908 Swoo_1260 -125 4.2 GAATTTGATCTGTCTCAAACTT
Position: -77
Score: 4
Sequence: TTTGTTGATGTTGATCAAATTC
Locus tag: Sfri_3610
Sfri_3610 -77 4 TTTGTTGATGTTGATCAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sama_2599
Ortholog function: putative lipoprotein
Shewanella sp MR-4 Shewmr4_1948 -86 4.6 TGCTTTGATTTACATCACAATT
Shewanella sp MR-7 Shewmr7_2028 -86 4.6 TGCTTTGATTTACATCACAATT
Shewanella frigidimarina NCIMB 400 Sfri_3610 -77 4 TTTGTTGATGTTGATCAAATTC
Shewanella amazonensis SB2B Sama_2599 -87 4.2 CTGCTTGATGAGGATCACAATT
Shewanella loihica PV-4 Shew_3086 -117 3.7 AAGCGTTAGCCCACTCACAAAG
Position: -313
Score: 3.8
Sequence: TTTTGAGACTTATCACACCAAT
Locus tag: Sfri_3630
Sfri_3630 -313 3.8 TTTTGAGACTTATCACACCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3588
Ortholog function: gpr1/fun34/yaaH family protein
Shewanella putrefaciens CN-32 Sputcn32_1014 -312 4.1 AATTTTGAACCAATGCAAATAT
-44 4.3 TATTTTGATTTTAATCAATTTA
Shewanella sp W3-18-1 Sputw3181_3151 -312 4.1 AATTTTGAACCAATGCAAATAT
-44 4.3 TATTTTGATTTTAATCAATTTA
Shewanella sp ANA-3 Shewana3_3180 -117 4.2 TATTTTGATTGTGATCTCTTTA
Shewanella sp MR-4 Shewmr4_3002 -292 3.8 AAGTTTGAACCTTAGCAAAATT
Shewanella sp MR-7 Shewmr7_3083 -292 3.8 AAGTTTGAACCTTAGCAAAATT
Shewanella frigidimarina NCIMB 400 Sfri_3630 -313 3.8 TTTTGAGACTTATCACACCAAT
Shewanella loihica PV-4 Shew_0904 -97 4.4 TATTGTGATGCCCTTAAGACTT
Shewanella pealeana ATCC 700345 Spea_0890 -246 3.8 TGGCGTGACGTGTGTCACTCTT
Shewanella woodyi ATCC 51908 Swoo_1050 -309 3.9 TTGTGTGATAAGGGTCTTGTTT
-206 3.9 TTATGTGATGAATGATTCATTT
Position: -334
Score: 4.6
Sequence: AAATGTGATTCAAAGCAGATAA
Position: -234
Score: 4.3
Sequence: TTTCATGATGTAAGTCTCATTA
Position: -156
Score: 5
Sequence: TGACGTGATATCGCTCACAAAT
Locus tag: Sfri_3632
Sfri_3632 -334 4.6 AAATGTGATTCAAAGCAGATAA
-234 4.3 TTTCATGATGTAAGTCTCATTA
-156 5 TGACGTGATATCGCTCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadC
Ortholog function: transcriptional regulator-related protein
Shewanella oneidensis MR-1 SO0940 -246 4.3 TAATGTGAGCGAAGGCACGATA
Shewanella sp MR-4 Shewmr4_0783 -246 3.8 CAATGTGCATCAACGCACATTA
Shewanella sp MR-7 Shewmr7_3240 -246 3.8 CAATGTGTGCCTGCGCACATTA
Shewanella baltica OS155 Sbal_0833 -75 4 TTGGGTTAGCAAGATCACATTA
Shewanella frigidimarina NCIMB 400 Sfri_3632 -334 4.6 AAATGTGATTCAAAGCAGATAA
-234 4.3 TTTCATGATGTAAGTCTCATTA
-156 5 TGACGTGATATCGCTCACAAAT
Shewanella loihica PV-4 Shew_0760 -234 3.9 CGATGTGAAGCTGATCACTCTA
Shewanella pealeana ATCC 700345 Spea_3438 -227 4.2 TTTCATGAACGATGTCACATTA
-149 3.8 GAGTGTGACTAACGTCTCATTT
Shewanella halifaxensis HAW-EB4 Shal_3519 -227 4.6 TTCTGTGACCGATAGCACATTA
-149 4.4 CTGTGTGATTAACCTCTCATTT
Shewanella piezotolerans WP3 swp_4010 -258 4.3 TTTATTGATCTAGATCTAATAA
Shewanella sediminis HAW-EB3 Ssed_0883 -147 4.7 CAGTGTGATTTTGTTCGCAAAA
Shewanella woodyi ATCC 51908 Swoo_0885 -232 4.2 AATGGTGAGCTGGATCATGTTA
-145 4.5 CAATGTGATCCTCTTCGCAAAC
Position: -325
Score: 4.5
Sequence: ATTTGTGAGCGATATCACGTCA
Position: -147
Score: 4.4
Sequence: TTATCTGCTTTGAATCACATTT
Locus tag: Sfri_3633
Sfri_3633 -325 4.5 ATTTGTGAGCGATATCACGTCA
-147 4.4 TTATCTGCTTTGAATCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0939
Ortholog function: split-soret diheme cytochrome c
Shewanella frigidimarina NCIMB 400 Sfri_3633 -325 4.5 ATTTGTGAGCGATATCACGTCA
-147 4.4 TTATCTGCTTTGAATCACATTT
Shewanella halifaxensis HAW-EB4 Shal_3518 -328 4.2 AAATGAGAGGTTAATCACACAG
-250 4.7 TAATGTGCTATCGGTCACAGAA
Position: -116
Score: 4.5
Sequence: TAATGTGATGATAATTATATTA
Locus tag: Sfri_3674
Sfri_3674 -116 4.5 TAATGTGATGATAATTATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3553
Ortholog function: putative sulfate permease
Shewanella oneidensis MR-1 SO3553 -70 3.9 TTTTGCAACTATGATCACACAA
Shewanella oneidensis MR-1 SO3553 -70 3.9 TTTTGCAACTATGATCACACAA
Shewanella oneidensis MR-1 SO3553 -70 3.9 TTTTGCAACTATGATCACACAA
Shewanella putrefaciens CN-32 Sputcn32_1042 -81 4 ATTTGCAATCATGATCACACAG
Shewanella putrefaciens CN-32 Sputcn32_1042 -81 4 ATTTGCAATCATGATCACACAG
Shewanella putrefaciens CN-32 Sputcn32_1042 -81 4 ATTTGCAATCATGATCACACAG
Shewanella sp W3-18-1 Sputw3181_3123 -81 4 ATTTGCAATCATGATCACACAG
Shewanella sp W3-18-1 Sputw3181_3123 -81 4 ATTTGCAATCATGATCACACAG
Shewanella sp W3-18-1 Sputw3181_3123 -81 4 ATTTGCAATCATGATCACACAG
Shewanella sp ANA-3 Shewana3_3154 -70 3.9 TTTTGCAACTATGATCACACAA
Shewanella sp ANA-3 Shewana3_3154 -70 3.9 TTTTGCAACTATGATCACACAA
Shewanella sp ANA-3 Shewana3_3154 -70 3.9 TTTTGCAACTATGATCACACAA
Shewanella sp MR-4 Shewmr4_2974 -70 4.5 TTTTGTAACTATGATCACACAA
Shewanella sp MR-4 Shewmr4_2974 -70 4.5 TTTTGTAACTATGATCACACAA
Shewanella sp MR-4 Shewmr4_2974 -70 4.5 TTTTGTAACTATGATCACACAA
Shewanella sp MR-7 Shewmr7_3056 -70 4.5 TTTTGTAACTATGATCACACAA
Shewanella sp MR-7 Shewmr7_3056 -70 4.5 TTTTGTAACTATGATCACACAA
Shewanella sp MR-7 Shewmr7_3056 -70 4.5 TTTTGTAACTATGATCACACAA
Shewanella baltica OS155 Sbal_1037 -139 3.8 TGATATGAAATTGTTCGCAGTT
-95 4.1 TTTCGTTATATACTTAACAGAA
Shewanella frigidimarina NCIMB 400 Sfri_3674 -116 4.5 TAATGTGATGATAATTATATTA
Shewanella frigidimarina NCIMB 400 Sfri_3674 -116 4.5 TAATGTGATGATAATTATATTA
Shewanella frigidimarina NCIMB 400 Sfri_3674 -116 4.5 TAATGTGATGATAATTATATTA
Shewanella amazonensis SB2B Sama_1067 -82 4.1 AAATTTGCCAAAGCTCACACAT
Shewanella amazonensis SB2B Sama_1067 -82 4.1 AAATTTGCCAAAGCTCACACAT
Shewanella amazonensis SB2B Sama_1067 -82 4.1 AAATTTGCCAAAGCTCACACAT
Shewanella sediminis HAW-EB3 Ssed_1334 -233 4.1 GTAAGTGCTACGCATCACATTT
Shewanella sediminis HAW-EB3 Ssed_1334 -233 4.1 GTAAGTGCTACGCATCACATTT
Shewanella sediminis HAW-EB3 Ssed_1334 -233 4.1 GTAAGTGCTACGCATCACATTT
Shewanella woodyi ATCC 51908 Swoo_3320 -288 3.7 TCCAGCGACTTAGATCACATTT
Shewanella woodyi ATCC 51908 Swoo_3320 -288 3.7 TCCAGCGACTTAGATCACATTT
Position: -249
Score: 3.9
Sequence: TTTTGAGATCTACTCCATAGAT
Position: -198
Score: 4
Sequence: ATATGTCATACATTTAACGTAT
Locus tag: Sfri_3694
Sfri_3694 -249 3.9 TTTTGAGATCTACTCCATAGAT
-198 4 ATATGTCATACATTTAACGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: shew_3181
Ortholog function: twin-arginine translocation pathway signal precursor
Shewanella putrefaciens CN-32 Sputcn32_3387 -216 4.2 TTTTGTGAAGCACTGCAAAGAT
Shewanella sp W3-18-1 Sputw3181_0556 -216 4.2 TTTTGTGAAGCACTGCAAAGAT
Shewanella frigidimarina NCIMB 400 Sfri_3694 -198 4 ATATGTCATACATTTAACGTAT
Shewanella loihica PV-4 Shew_3181 -207 4.3 TTTTGTGAAGCACAGCAAAGAT
Position: -140
Score: 3.8
Sequence: AATTGTTATGGGCTTGACCAAT
Locus tag: Sfri_3755
Sfri_3755 -140 3.8 AATTGTTATGGGCTTGACCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mshI
Ortholog function: MSHA biogenesis protein MshI
Shewanella oneidensis MR-1 SO4114.2 -318 4.4 TATTGTAATTTAGTCAACATTT
-132 4.3 AAATGTGACCTAATTGACGTAT
Shewanella putrefaciens CN-32 Sputcn32_0556 -313 4 TATTGTAATTTAGCCAAAATTT
-114 3.8 GAATATGACAGGTTTCACGTTT
Shewanella sp W3-18-1 Sputw3181_3616 -313 4 TATTGTAATTTAGCCAAAATTT
-114 3.8 GAATATGACAGGTTTCACGTTT
Shewanella sp ANA-3 Shewana3_3667 -312 4.2 TATTGTAATTTAATCAACATTT
-119 4.2 GGATATGATGGGTTTCACATTT
Shewanella sp MR-4 Shewmr4_3490 -312 4.2 TATTGTAATTTAATCAACATTT
Shewanella sp MR-7 Shewmr7_0462 -312 4.2 TATTGTAATTTAATCAACATTT
Shewanella denitrificans OS217 Sden_3351 -298 3.8 TCTTGTTATTTAAACAACATTT
-197 4.2 TAATGTGATGCATAGCAGCCTT
Shewanella frigidimarina NCIMB 400 Sfri_3755 -303 4.1 TATTGTTATTTAGACAAAATAA
Shewanella pealeana ATCC 700345 Spea_3772 -196 3.8 TATAGCGATAAAGTTAAAAAAT
Shewanella halifaxensis HAW-EB4 Shal_3857 -196 3.8 TATAGCGATAAAGTTAAAAAAT
Shewanella woodyi ATCC 51908 Swoo_4421 -345 3.8 AAGTTTTATCTAGTTAACCCTT
Position: -303
Score: 4.1
Sequence: TATTGTTATTTAGACAAAATAA
Locus tag: Sfri_3757
Sfri_3757 -303 4.1 TATTGTTATTTAGACAAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4118
Ortholog function: NADP-dependent malic enzyme (EC 1.1.1.40)
Shewanella oneidensis MR-1 SO4118 -318 4.4 TATTGTAATTTAGTCAACATTT
-132 4.3 AAATGTGACCTAATTGACGTAT
Shewanella putrefaciens CN-32 Sputcn32_0554 -313 4 TATTGTAATTTAGCCAAAATTT
-114 3.8 GAATATGACAGGTTTCACGTTT
Shewanella sp W3-18-1 Sputw3181_3618 -313 4 TATTGTAATTTAGCCAAAATTT
-114 3.8 GAATATGACAGGTTTCACGTTT
Shewanella sp ANA-3 Shewana3_3669 -312 4.2 TATTGTAATTTAATCAACATTT
-119 4.2 GGATATGATGGGTTTCACATTT
Shewanella sp MR-4 Shewmr4_3492 -312 4.2 TATTGTAATTTAATCAACATTT
Shewanella sp MR-7 Shewmr7_0460 -312 4.2 TATTGTAATTTAATCAACATTT
Shewanella denitrificans OS217 Sden_3353 -298 3.8 TCTTGTTATTTAAACAACATTT
-197 4.2 TAATGTGATGCATAGCAGCCTT
Shewanella frigidimarina NCIMB 400 Sfri_3757 -303 4.1 TATTGTTATTTAGACAAAATAA
Shewanella pealeana ATCC 700345 Spea_3774 -196 3.8 TATAGCGATAAAGTTAAAAAAT
Shewanella halifaxensis HAW-EB4 Shal_3859 -196 3.8 TATAGCGATAAAGTTAAAAAAT
Shewanella piezotolerans WP3 swp_0481 -181 3.8 TATAGCGATAAAGTTAAAATTT
Shewanella woodyi ATCC 51908 Swoo_4423 -345 3.8 AAGTTTTATCTAGTTAACCCTT
Position: -139
Score: 4.6
Sequence: TAGTGTGAGCTGATTCATACTT
Locus tag: Sfri_3771
Sfri_3771 -139 4.6 TAGTGTGAGCTGATTCATACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acnB
Ortholog function: aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Shewanella oneidensis MR-1 SO0432 -141 4.1 GAGTGTGACCTGATTCATACTT
Shewanella putrefaciens CN-32 Sputcn32_3409 -141 4.1 GAGTGTGACCTGATTCATACTT
Shewanella sp W3-18-1 Sputw3181_0534 -141 4.1 GAGTGTGACCTGATTCATACTT
Shewanella sp ANA-3 Shewana3_0433 -66 4.1 GAGTGTGACCTGATTCATACTT
Shewanella sp MR-4 Shewmr4_0437 -66 4.1 GAGTGTGACCTGATTCATACTT
Shewanella sp MR-7 Shewmr7_3592 -66 4.1 GAGTGTGACCTGATTCATACTT
Shewanella baltica OS155 Sbal_3905 -66 4.1 GAGTGTGACCTGATTCATACTT
Shewanella denitrificans OS217 Sden_3377 -139 4.1 CAGTGTGAGCCGATTCATACTT
-67 3.9 AATTGTTAGCCTTATCACTATG
Shewanella frigidimarina NCIMB 400 Sfri_3771 -139 4.6 TAGTGTGAGCTGATTCATACTT
Shewanella amazonensis SB2B Sama_0382 -138 4 GAGTGTGAGCTGATTCATACTT
Shewanella loihica PV-4 Shew_3424 -140 4.3 GAGTGTGATCTGATTCATACTT
Shewanella pealeana ATCC 700345 Spea_0425 -268 4 TTATATAATTTAGATCAAGTTT
-160 4.8 AAGTGTGATCGGATTCATACTT
Shewanella halifaxensis HAW-EB4 Shal_0482 -247 3.7 TTATATAATTTAGATCAAGGTT
-139 5 AAATGTGATCGGATTCATACTT
Shewanella piezotolerans WP3 swp_4740 -245 3.9 TTATGTGATTAATCTCAGTGTT
-139 4.9 AAGTGTGATCTGATTCATACTT
Shewanella sediminis HAW-EB3 Ssed_0438 -141 4.4 GAGTGTGATCTGATTCAAACTT
Shewanella woodyi ATCC 51908 Swoo_0285 -139 4.4 GAGTGTGATCTGATTCAAACTT
Position: -288
Score: 4.3
Sequence: AAGTATGAATCAGCTCACACTA
Locus tag: Sfri_3772
Sfri_3772 -288 4.3 AAGTATGAATCAGCTCACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yniC
Ortholog function: 2-deoxyglucose-6-phosphate hydrolase YniC
Shewanella oneidensis MR-1 SO0431 -302 3.9 AAGTATGAATCAGGTCACACTC
-118 3.8 TAACGAAATGCTTTTCACAGTA
Shewanella putrefaciens CN-32 Sputcn32_3410 -316 3.9 AAGTATGAATCAGGTCACACTC
Shewanella sp W3-18-1 Sputw3181_0533 -316 3.9 AAGTATGAATCAGGTCACACTC
Shewanella sp ANA-3 Shewana3_0432 -315 3.9 AAGTATGAATCAGGTCACACTC
Shewanella sp MR-4 Shewmr4_0436 -315 3.9 AAGTATGAATCAGGTCACACTC
Shewanella sp MR-7 Shewmr7_3593 -315 3.9 AAGTATGAATCAGGTCACACTC
Shewanella baltica OS155 Sbal_3906 -315 3.9 AAGTATGAATCAGGTCACACTC
Shewanella denitrificans OS217 Sden_3378 -316 4 AAGTATGAATCGGCTCACACTG
Shewanella frigidimarina NCIMB 400 Sfri_3772 -288 4.3 AAGTATGAATCAGCTCACACTA
Shewanella amazonensis SB2B Sama_0381 -255 4 AAGTATGAATCAGCTCACACTC
Shewanella loihica PV-4 Shew_3425 -295 4.1 AAGTATGAATCAGATCACACTC
Shewanella pealeana ATCC 700345 Spea_0424 -286 4.3 AAGTATGAATCCGATCACACTT
-178 4.1 AAACTTGATCTAAATTATATAA
Shewanella halifaxensis HAW-EB4 Shal_0481 -286 4.5 AAGTATGAATCCGATCACATTT
-178 3.7 AACCTTGATCTAAATTATATAA
Shewanella piezotolerans WP3 swp_4741 -283 4.4 AAGTATGAATCAGATCACACTT
-177 3.7 AACACTGAGATTAATCACATAA
-101 3.7 TTTCGTAAAGCTAAACACAATA
Shewanella sediminis HAW-EB3 Ssed_0437 -296 4.2 AAGTTTGAATCAGATCACACTC
Shewanella woodyi ATCC 51908 Swoo_0284 -296 4.2 AAGTTTGAATCAGATCACACTC
Position: -168
Score: 5.1
Sequence: TATTGTGATCGGTTTCAAACAA
Locus tag: Sfri_3775
Sfri_3775 -168 5.1 TATTGTGATCGGTTTCAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpdA
Ortholog function: Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Shewanella oneidensis MR-1 SO0426 -113 4.7 TATTGTGATCAGTATCAAACAC
Shewanella putrefaciens CN-32 Sputcn32_3415 -111 4.7 TATTGTGATCAGTATCAAACAC
Shewanella sp W3-18-1 Sputw3181_0528 -111 4.7 TATTGTGATCAGTATCAAACAC
Shewanella sp ANA-3 Shewana3_0428 -113 4.7 TATTGTGATCAGTATCAAACAC
Shewanella sp MR-4 Shewmr4_0430 -113 4.7 TATTGTGATCAGTATCAAACAC
Shewanella sp MR-7 Shewmr7_3597 -113 4.7 TATTGTGATCAGTATCAAACAC
Shewanella baltica OS155 Sbal_3911 -111 4.7 TATTGTGATCAGTATCAAACAC
Shewanella frigidimarina NCIMB 400 Sfri_3775 -168 5.1 TATTGTGATCGGTTTCAAACAA
Shewanella pealeana ATCC 700345 Spea_0421 -128 4.5 GATTGTGATCAGCATCAAACAA
Shewanella halifaxensis HAW-EB4 Shal_0478 -130 4.6 GATTGTGATCCGTATCAAACAA
Shewanella piezotolerans WP3 swp_4749 -113 4.5 GATTGTGATCAGTATCAAACAA
Position: -169
Score: 4.9
Sequence: AAGTTTGATCATGATCACAATT
Locus tag: Sfri_3816
Sfri_3816 -169 4.9 AAGTTTGATCATGATCACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4232
Ortholog function: long-chain fatty acid transport protein
Shewanella oneidensis MR-1 SO4232 -202 4.4 AAAAGTGATTTTCGTCACTAAA
Shewanella putrefaciens CN-32 Sputcn32_0475 -195 4.6 AAAAGTGATTTTTATCACTAAA
Shewanella sp W3-18-1 Sputw3181_0378 -195 4.6 AAAAGTGATTTTTATCACTAAA
Shewanella sp ANA-3 Shewana3_3757 -201 4.6 AAAAGTGATTTATCTCACTAAA
Shewanella sp MR-4 Shewmr4_3584 -201 4.6 AAAAGTGATTTATCTCACTAAA
Shewanella sp MR-7 Shewmr7_0372 -201 4.6 AAAAGTGATTTATCTCACTAAA
Shewanella baltica OS155 Sbal_0390 -207 4.3 AATGGTGATATTGGTCACTAAA
Shewanella frigidimarina NCIMB 400 Sfri_3816 -169 4.9 AAGTTTGATCATGATCACAATT
Shewanella pealeana ATCC 700345 Spea_3824 -164 3.8 AAGTGTGATCTACTCTGTATTT
Shewanella halifaxensis HAW-EB4 Shal_0442 -114 3.8 TTTTGTGCTGTTTTTTATAAAG
Position: -226
Score: 4
Sequence: AATTGGGATCTTAGTCACTCTA
Locus tag: Sfri_3874
Sfri_3874 -226 4 AATTGGGATCTTAGTCACTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: prlC
Ortholog function: Oligopeptidase A (EC 3.4.24.70)
Shewanella oneidensis MR-1 SO4699 -136 4.2 AATTGAGAACTGGCTCACTTTT
Shewanella putrefaciens CN-32 Sputcn32_0087 -178 4.3 AATTGAGAACTAGTTCACTTTT
Shewanella sp W3-18-1 Sputw3181_3978 -178 4.3 AATTGAGAACTAGTTCACTTTT
Shewanella sp ANA-3 Shewana3_4051 -136 4.6 AATTGTGAACTGGTTCGCTTTT
Shewanella sp MR-4 Shewmr4_3842 -136 4.3 AATTGTGAACTGAGTCGCTTTT
Shewanella sp MR-7 Shewmr7_3935 -136 4.3 AATTGTGAACTGAGTCGCTTTT
Shewanella baltica OS155 Sbal_0124 -136 4.3 AAATGCGAACGAGTTCACTTTT
Shewanella frigidimarina NCIMB 400 Sfri_3874 -226 4 AATTGGGATCTTAGTCACTCTA
Shewanella loihica PV-4 Shew_3657 -247 3.8 ATTTGCGATCCGCTTGGCAATA
Shewanella pealeana ATCC 700345 Spea_4065 -143 3.9 AAACTTGATTAAGATCGCGGAT
Shewanella halifaxensis HAW-EB4 Shal_0193 -192 4.4 ATTTGCGACGTGGTTTACAATA
-142 4.2 AAATTTGATCTAGATCCTAGAT
Shewanella piezotolerans WP3 swp_4926 -311 3.7 ATTTGCGAGGCGCTTTGCAATA
-261 3.6 AAAATTGACTTTAGTCAAAGAT
Shewanella sediminis HAW-EB3 Ssed_0145 -210 4.1 ATTTGAGAAGTAATTCTCAATA
Shewanella woodyi ATCC 51908 Swoo_0124 -172 4.2 TTTTTTGAGCTGGGTCAAAGTA
Position: -148
Score: 4
Sequence: TAGAGTGACTAAGATCCCAATT
Locus tag: Sfri_3875
Sfri_3875 -148 4 TAGAGTGACTAAGATCCCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4700
Ortholog function: hypothetical protein
Shewanella oneidensis MR-1 SO4700 -154 4.5 AAAAGTGAGCCAGTTCTCAATT
Shewanella putrefaciens CN-32 Sputcn32_0086 -153 4.5 AAAAGTGAACTAGTTCTCAATT
Shewanella sp W3-18-1 Sputw3181_3979 -153 4.5 AAAAGTGAACTAGTTCTCAATT
Shewanella sp ANA-3 Shewana3_4052 -154 4.3 AAAAGCGAACCAGTTCACAATT
Shewanella sp MR-4 Shewmr4_3843 -95 4.4 AAAAGCGACTCAGTTCACAATT
Shewanella sp MR-7 Shewmr7_3936 -95 4.4 AAAAGCGACTCAGTTCACAATT
Shewanella baltica OS155 Sbal_0123 -154 4.6 AAAAGTGAACTCGTTCGCATTT
Shewanella frigidimarina NCIMB 400 Sfri_3875 -148 4 TAGAGTGACTAAGATCCCAATT
Shewanella loihica PV-4 Shew_3658 -101 3.6 TATTGCCAAGCGGATCGCAAAT
Shewanella halifaxensis HAW-EB4 Shal_0192 -105 4.2 TATTGTAAACCACGTCGCAAAT
Shewanella piezotolerans WP3 swp_4927 -104 3.7 TATTGCAAAGCGCCTCGCAAAT
Shewanella sediminis HAW-EB3 Ssed_0144 -115 4.2 TATTGAGAATTACTTCTCAAAT
Shewanella woodyi ATCC 51908 Swoo_0123 -153 4.3 TACTTTGACCCAGCTCAAAAAA
-78 3.9 AAGCGTTATCATTTACACATTA
Position: -104
Score: 4.7
Sequence: TAATGTGATCAGGCTAATATTT
Locus tag: Sfri_3944
Sfri_3944 -104 4.7 TAATGTGATCAGGCTAATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: engB
Ortholog function: GTP-binding protein EngB
Shewanella oneidensis MR-1 SO4667 -96 4.7 TAATGTGATCGGGGTAATATTT
Shewanella putrefaciens CN-32 Sputcn32_3907 -96 4.6 TAATGTGATCGGAGTAATATTT
Shewanella sp W3-18-1 Sputw3181_0044 -96 4.6 TAATGTGATCGGAGTAATATTT
Shewanella sp ANA-3 Shewana3_4110 -96 4.7 TAATGTGATCGGGGTAATATTT
Shewanella sp MR-4 Shewmr4_3906 -96 4.7 TAATGTGATCGGGGTAATATTT
Shewanella sp MR-7 Shewmr7_3998 -96 4.7 TAATGTGATCGGGGTAATATTT
Shewanella baltica OS155 Sbal_0052 -95 4.6 TAATGTGATCGGAGTAATATTT
Shewanella denitrificans OS217 Sden_3621 -182 3.8 TATTATGCTCGAAATAATATTT
Shewanella frigidimarina NCIMB 400 Sfri_3944 -104 4.7 TAATGTGATCAGGCTAATATTT
Shewanella amazonensis SB2B Sama_0092 -96 4.1 ATATGTGATCGGGGCAATATTT
Shewanella loihica PV-4 Shew_3715 -95 4.7 TTATGTGATCGGGGTAATATTT
Shewanella pealeana ATCC 700345 Spea_0101 -96 4.7 TTATGTGATCGGGGTAATATTT
Shewanella halifaxensis HAW-EB4 Shal_4221 -96 4.7 TTATGTGATCGGGGTAATATTT
Shewanella piezotolerans WP3 swp_5074a -96 4.7 TTATGTGATCGGGGTAATATTT
Shewanella sediminis HAW-EB3 Ssed_0095 -95 4.7 TTATGTGATCGAGGTAATATTT
Shewanella woodyi ATCC 51908 Swoo_0058 -110 4.8 TATTGTGATCGAGGTAATATTT
Position: -181
Score: 4.3
Sequence: AAATATTAGCCTGATCACATTA
Locus tag: Sfri_3945
Sfri_3945 -181 4.3 AAATATTAGCCTGATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cytcB
Ortholog function: Cytochrome c4
Shewanella oneidensis MR-1 SO4666 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella oneidensis MR-1 SO4666 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella putrefaciens CN-32 Sputcn32_3908 -95 4.3 AAATATTACTCCGATCACATTA
Shewanella putrefaciens CN-32 Sputcn32_3908 -95 4.3 AAATATTACTCCGATCACATTA
Shewanella sp W3-18-1 Sputw3181_0043 -95 4.3 AAATATTACTCCGATCACATTA
Shewanella sp W3-18-1 Sputw3181_0043 -95 4.3 AAATATTACTCCGATCACATTA
Shewanella sp ANA-3 Shewana3_4111 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella sp ANA-3 Shewana3_4111 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella sp MR-4 Shewmr4_3907 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella sp MR-4 Shewmr4_3907 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella sp MR-7 Shewmr7_3999 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella sp MR-7 Shewmr7_3999 -95 4.4 AAATATTACCCCGATCACATTA
Shewanella baltica OS155 Sbal_0051 -95 4.3 AAATATTACTCCGATCACATTA
Shewanella baltica OS155 Sbal_0051 -95 4.3 AAATATTACTCCGATCACATTA
Shewanella denitrificans OS217 Sden_3622 -94 3.7 AAATATTATTTCGAGCATAATA
Shewanella denitrificans OS217 Sden_3622 -94 3.7 AAATATTATTTCGAGCATAATA
Shewanella frigidimarina NCIMB 400 Sfri_3945 -181 4.3 AAATATTAGCCTGATCACATTA
Shewanella frigidimarina NCIMB 400 Sfri_3945 -181 4.3 AAATATTAGCCTGATCACATTA
Shewanella amazonensis SB2B Sama_0091 -95 3.7 AAATATTGCCCCGATCACATAT
Shewanella loihica PV-4 Shew_3716 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella loihica PV-4 Shew_3716 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella pealeana ATCC 700345 Spea_0100 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella pealeana ATCC 700345 Spea_0100 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella halifaxensis HAW-EB4 Shal_4222 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella halifaxensis HAW-EB4 Shal_4222 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella piezotolerans WP3 swp_5075 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella piezotolerans WP3 swp_5075 -95 4.4 AAATATTACCCCGATCACATAA
Shewanella sediminis HAW-EB3 Ssed_0094 -96 4.5 AAATATTACCTCGATCACATAA
Shewanella sediminis HAW-EB3 Ssed_0094 -96 4.5 AAATATTACCTCGATCACATAA
Shewanella woodyi ATCC 51908 Swoo_0057 -157 4.2 AAATATGATGTTTTGCACTTTA
-96 4.4 AAATATTACCTCGATCACAATA
Shewanella woodyi ATCC 51908 Swoo_0057 -157 4.2 AAATATGATGTTTTGCACTTTA
-96 4.4 AAATATTACCTCGATCACAATA
Position: -107
Score: 4
Sequence: AAACGTGACCGTAAGCTCAAAA
Locus tag: Sfri_3973
Sfri_3973 -107 4 AAACGTGACCGTAAGCTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0075
Ortholog function: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Shewanella frigidimarina NCIMB 400 Sfri_3973 -107 4 AAACGTGACCGTAAGCTCAAAA
Shewanella loihica PV-4 Shew_3776 -110 4.7 TTTTGTGCTCCAATTAACATTA
Shewanella pealeana ATCC 700345 Spea_4186 -109 4.3 TTTTGTGTGTTAGTTAACAAAA
Shewanella halifaxensis HAW-EB4 Shal_0063 -109 4.5 TTTTGTGTTTGAGTTAACAAAA
Shewanella woodyi ATCC 51908 Swoo_4860 -110 4.6 ATCTGTGATCGGTTTAACACTA
Position: -131
Score: 3.8
Sequence: ATATGTGACATACGCATCATAA
Locus tag: Sfri_4035
Sfri_4035 -131 3.8 ATATGTGACATACGCATCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_4035
Ortholog function: Conserved hypothetical signal peptide protein
Shewanella denitrificans OS217 Sden_0638 -116 4 TTCTTTGATGTTAATCAAGCAT
Shewanella frigidimarina NCIMB 400 Sfri_4035 -131 3.8 ATATGTGACATACGCATCATAA
Shewanella amazonensis SB2B Sama_0589 -108 3.8 TTTGTTGATCTGGATCATTAAT
Shewanella loihica PV-4 Shew_3120 -108 4.2 TTTGTTGATCTTAATCAAAAAA
Shewanella pealeana ATCC 700345 Spea_0712 -106 4.4 ATTATTGATCTTTATCAAAAAA
Shewanella piezotolerans WP3 swp_4367 -104 4.1 AACCTTGATCTTAATCATAATT
Shewanella sediminis HAW-EB3 Ssed_3889 -107 4.2 TTTGTTGATCCTTATCAAAAAA
Shewanella woodyi ATCC 51908 Swoo_3788 -106 3.9 TTTGTTGATCTTAATCAAAAAC
Position: -116
Score: 4.7
Sequence: ATTTTTGATATATATCACAGTC
Locus tag: Sfri_4042
Sfri_4042 -116 4.7 ATTTTTGATATATATCACAGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4743
Ortholog function: ferrichrome-iron receptor
Shewanella oneidensis MR-1 SO4743 -164 4.9 AATTTTGATCTGTATCACGCAA
Shewanella putrefaciens CN-32 Sputcn32_3953 -116 4.7 TAATTTGATCGGTATCACACTC
Shewanella sp W3-18-1 Sputw3181_4050 -116 4.7 TAATTTGATCGGTATCACACTC
Shewanella sp MR-4 Shewmr4_3922 -116 4.3 AAACTTGATCTAAGTCACGCTA
Shewanella sp MR-7 Shewmr7_4014 -116 4.3 AAACTTGATCTAAGTCACGCTA
Shewanella frigidimarina NCIMB 400 Sfri_4042 -116 4.7 ATTTTTGATATATATCACAGTC
Shewanella halifaxensis HAW-EB4 Shal_4287 -46 3.8 TATTGCGACTCAATTAATACAT
Shewanella piezotolerans WP3 swp_5150 -117 4.3 TGTTGTGCGCGAGTTCACATTG
Shewanella woodyi ATCC 51908 Swoo_4894 -91 3.8 CTTTTTGATCTTTATCTAGTTT