Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing fadI gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -112
Score: 3.61813
Sequence: AAGTTAGAATCGGGTCACACTT
Locus tag: Sama_2168
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sama_2167
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -112 3.6 AAGTTAGAATCGGGTCACACTT Sama_2168
Shewanella baltica OS155
Position: -136
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Sbal_2761
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sbal_2760
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -136 3.9 AAGTTAGAATCAGATCACACTT Sbal_2761
Shewanella denitrificans OS217
Position: -109
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Sden_1529
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sden_1530
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -109 3.9 AAGTTAGAATCAGATCACACTT Sden_1529
Shewanella frigidimarina NCIMB 400
Position: -104
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Sfri_2677
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sfri_2676
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -104 3.9 AAGTTAGAATCAGATCACACTT Sfri_2677
Shewanella halifaxensis HAW-EB4
Position: -119
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Shal_2671
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Shal_2670
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -119 3.9 AAGTTAGAATCAGATCACACTT Shal_2671
Shewanella loihica PV-4
Position: -134
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Shew_2426
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Shew_2425
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -134 3.9 AAGTTAGAATCAGATCACACTT Shew_2426
Shewanella oneidensis MR-1
Position: -131
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: SO3089
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: SO3088
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -131 3.9 AAGTTAGAATCAGATCACACTT SO3089
Shewanella pealeana ATCC 700345
Position: -116
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Spea_2599
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Spea_2598
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -116 3.9 AAGTTAGAATCAGATCACACTT Spea_2599
Shewanella piezotolerans WP3
Position: -122
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: swp_3140
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: swp_3139
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -122 3.9 AAGTTAGAATCAGATCACACTT swp_3140
Shewanella putrefaciens CN-32
Position: -136
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Sputcn32_2460
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sputcn32_2459
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -136 3.9 AAGTTAGAATCAGATCACACTT Sputcn32_2460
Shewanella sediminis HAW-EB3
Position: -151
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Ssed_1628
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Ssed_1629
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -151 3.9 AAGTTAGAATCAGATCACACTT Ssed_1628
Shewanella sp ANA-3
Position: -135
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Shewana3_1460
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Shewana3_1461
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -135 3.9 AAGTTAGAATCAGATCACACTT Shewana3_1460
Shewanella sp MR-4
Position: -135
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Shewmr4_1407
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Shewmr4_1408
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -135 3.9 AAGTTAGAATCAGATCACACTT Shewmr4_1407
Shewanella sp MR-7
Position: -135
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Shewmr7_1472
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Shewmr7_1473
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -135 3.9 AAGTTAGAATCAGATCACACTT Shewmr7_1472
Shewanella sp W3-18-1
Position: -136
Score: 3.87355
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Sputw3181_1548
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sputw3181_1549
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -136 3.9 AAGTTAGAATCAGATCACACTT Sputw3181_1548
Shewanella woodyi ATCC 51908
Position: -138
Score: 4.0711
Sequence: AAGTTAGAATCAGATCACATTT
Locus tag: Swoo_3027
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Swoo_3026
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI-fadJ -138 4.1 AAGTTAGAATCAGATCACATTT Swoo_3027
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