Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO4606 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -318
Score: 4.44888
Sequence: TAAAGTGATCTTGATCAATATT
Locus tag: Sama_3483
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sama_3484
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sama_3485
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sama_3486
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -318 4.4 TAAAGTGATCTTGATCAATATT Sama_3483
Shewanella baltica OS155
Position: -317
Score: 4.39313
Sequence: ATAAGTGATCTTGATCAATATT
Locus tag: Sbal_0154
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sbal_0153
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sbal_0152
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sbal_0151
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -317 4.4 ATAAGTGATCTTGATCAATATT Sbal_0154
Shewanella denitrificans OS217
Position: -316
Score: 4.4423
Sequence: AAAAGTGATCTTGATCAATATT
Locus tag: Sden_3517
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sden_3518
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sden_3519
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sden_3520
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -316 4.4 AAAAGTGATCTTGATCAATATT Sden_3517
Shewanella frigidimarina NCIMB 400
Position: -321
Score: 3.85098
Sequence: CAAAGTGATCTTGATCAATGTT
Locus tag: Sfri_0258
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sfri_0257
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sfri_0256
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sfri_0255
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -321 3.9 CAAAGTGATCTTGATCAATGTT Sfri_0258
Shewanella loihica PV-4
Position: -321
Score: 4.4423
Sequence: AAAAGTGATCTTGATCAATATT
Position: -264
Score: 4.04584
Sequence: TTATTTGTTATATCGCACAATT
Locus tag: Shew_0125
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Shew_0124
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Shew_0123
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Shew_0122
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -321 4.4 AAAAGTGATCTTGATCAATATT Shew_0125
-264 4 TTATTTGTTATATCGCACAATT
Shewanella oneidensis MR-1
Position: -317
Score: 4.22767
Sequence: AGAAGTGATCTTGATCAATTTT
Locus tag: SO4606
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: SO4607
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: SO4608
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: SO4609
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -317 4.2 AGAAGTGATCTTGATCAATTTT SO4606
Shewanella putrefaciens CN-32
Position: -309
Score: 4.39313
Sequence: ATAAGTGATCTTGATCAATATT
Locus tag: Sputcn32_3782
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sputcn32_3783
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sputcn32_3784
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sputcn32_3785
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -309 4.4 ATAAGTGATCTTGATCAATATT Sputcn32_3782
Shewanella sp ANA-3
Position: -318
Score: 4.22767
Sequence: AGAAGTGATCTTGATCAATTTT
Locus tag: Shewana3_3991
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Shewana3_3992
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Shewana3_3993
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Shewana3_3994
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -318 4.2 AGAAGTGATCTTGATCAATTTT Shewana3_3991
Shewanella sp MR-4
Position: -318
Score: 4.22767
Sequence: AGAAGTGATCTTGATCAATTTT
Locus tag: Shewmr4_3791
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Shewmr4_3792
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Shewmr4_3793
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Shewmr4_3794
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -318 4.2 AGAAGTGATCTTGATCAATTTT Shewmr4_3791
Shewanella sp MR-7
Position: -317
Score: 4.22767
Sequence: AGAAGTGATCTTGATCAATTTT
Locus tag: Shewmr7_3864
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Shewmr7_3865
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Shewmr7_3866
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Shewmr7_3867
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -317 4.2 AGAAGTGATCTTGATCAATTTT Shewmr7_3864
Shewanella sp W3-18-1
Position: -309
Score: 4.39313
Sequence: ATAAGTGATCTTGATCAATATT
Locus tag: Sputw3181_0133
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sputw3181_0132
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sputw3181_0131
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sputw3181_0130
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606-SO4607-coxG-SO4609 -309 4.4 ATAAGTGATCTTGATCAATATT Sputw3181_0133
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