Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ccoN gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -180
Score: 4.26267
Sequence: TTTTTTGACACAGCTCAAGTAT
Locus tag: Sama_1791
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sama_1792
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sama_1793
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sama_1794
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -180 4.3 TTTTTTGACACAGCTCAAGTAT Sama_1791
Shewanella baltica OS155
Position: -173
Score: 4.49646
Sequence: TTTTTTGATATTGCTCAAGTAT
Locus tag: Sbal_4487
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sbal_4488
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sbal_4489
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sbal_4490
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -173 4.5 TTTTTTGATATTGCTCAAGTAT Sbal_4487
Shewanella denitrificans OS217
Position: -182
Score: 4.68212
Sequence: TTTTTTGATGTAGCTCAAGTAT
Locus tag: Sden_1851
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sden_1850
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sden_1849
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sden_1848
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -182 4.7 TTTTTTGATGTAGCTCAAGTAT Sden_1851
Shewanella frigidimarina NCIMB 400
Position: -186
Score: 4.35181
Sequence: TTTTTTGACTTAGCTCAAGTAT
Locus tag: Sfri_2010
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sfri_2011
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sfri_2012
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sfri_2013
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -186 4.4 TTTTTTGACTTAGCTCAAGTAT Sfri_2010
Shewanella halifaxensis HAW-EB4
Position: -221
Score: 4.53611
Sequence: AGATTTGATCTAGATCAACTTT
Position: -178
Score: 4.60845
Sequence: TTTTTTGATATAGCTCAAGTAT
Locus tag: Shal_2197
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Shal_2198
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Shal_2199
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Shal_2200
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -221 4.5 AGATTTGATCTAGATCAACTTT Shal_2197
-178 4.6 TTTTTTGATATAGCTCAAGTAT
Shewanella loihica PV-4
Position: -178
Score: 4.49646
Sequence: TTTTTTGATATTGCTCAAGTAT
Locus tag: Shew_1985
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Shew_1986
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Shew_1987
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Shew_1988
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -178 4.5 TTTTTTGATATTGCTCAAGTAT Shew_1985
Shewanella oneidensis MR-1
Position: -173
Score: 4.3135
Sequence: TTTTTTGACATGGCTCAAGTAT
Position: -125
Score: 4.10342
Sequence: AAATGTGAAGGATAACGCATTG
Locus tag: SO2364
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: SO2363
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: SO2362
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: SO2361
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -173 4.3 TTTTTTGACATGGCTCAAGTAT SO2364
-125 4.1 AAATGTGAAGGATAACGCATTG
Shewanella pealeana ATCC 700345
Position: -219
Score: 4.11139
Sequence: TACCTTGATCTAGATCAACTTA
Position: -176
Score: 4.60845
Sequence: TTTTTTGATATAGCTCAAGTAT
Locus tag: Spea_2214
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Spea_2215
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Spea_2216
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Spea_2217
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -219 4.1 TACCTTGATCTAGATCAACTTA Spea_2214
-176 4.6 TTTTTTGATATAGCTCAAGTAT
Shewanella piezotolerans WP3
Position: -221
Score: 4.30893
Sequence: TAGCTTGATCTAGATCAACTTT
Position: -178
Score: 4.35181
Sequence: TTTTTTGACATAGCTCAAGTAT
Locus tag: swp_2572
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: swp_2573
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: swp_2574
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: swp_2575
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -221 4.3 TAGCTTGATCTAGATCAACTTT swp_2572
-178 4.4 TTTTTTGACATAGCTCAAGTAT
Shewanella putrefaciens CN-32
Position: -171
Score: 4.23983
Sequence: TTTTTTGACATTGCTCAAGTAT
Locus tag: Sputcn32_1959
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sputcn32_1958
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sputcn32_1957
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sputcn32_1956
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -171 4.2 TTTTTTGACATTGCTCAAGTAT Sputcn32_1959
Shewanella sediminis HAW-EB3
Position: -177
Score: 4.35181
Sequence: TTTTTTGACATAGCTCAAGTAT
Locus tag: Ssed_2211
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Ssed_2212
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Ssed_2213
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Ssed_2214
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -177 4.4 TTTTTTGACATAGCTCAAGTAT Ssed_2211
Shewanella sp ANA-3
Position: -171
Score: 4.3135
Sequence: TTTTTTGACATGGCTCAAGTAT
Locus tag: Shewana3_2107
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Shewana3_2108
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Shewana3_2109
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Shewana3_2110
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -171 4.3 TTTTTTGACATGGCTCAAGTAT Shewana3_2107
Shewanella sp MR-4
Position: -171
Score: 4.3135
Sequence: TTTTTTGACATGGCTCAAGTAT
Locus tag: Shewmr4_2006
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Shewmr4_2007
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Shewmr4_2008
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Shewmr4_2009
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -171 4.3 TTTTTTGACATGGCTCAAGTAT Shewmr4_2006
Shewanella sp MR-7
Position: -171
Score: 4.3135
Sequence: TTTTTTGACATGGCTCAAGTAT
Locus tag: Shewmr7_1969
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Shewmr7_1968
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Shewmr7_1967
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Shewmr7_1966
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -171 4.3 TTTTTTGACATGGCTCAAGTAT Shewmr7_1969
Shewanella sp W3-18-1
Position: -171
Score: 4.23983
Sequence: TTTTTTGACATTGCTCAAGTAT
Locus tag: Sputw3181_2046
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sputw3181_2047
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sputw3181_2048
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sputw3181_2049
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -171 4.2 TTTTTTGACATTGCTCAAGTAT Sputw3181_2046
Shewanella woodyi ATCC 51908
Position: -220
Score: 4.30893
Sequence: TAGCTTGATCTAGATCAACTTT
Position: -177
Score: 4.35181
Sequence: TTTTTTGACATAGCTCAAGTAT
Locus tag: Swoo_2425
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Swoo_2424
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Swoo_2423
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Swoo_2422
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN-ccoO-ccoQ-ccoP -220 4.3 TAGCTTGATCTAGATCAACTTT Swoo_2425
-177 4.4 TTTTTTGACATAGCTCAAGTAT
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