Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing fadD1 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -140
Score: 4.83629
Sequence: TTATGTGATGATTGTCAAAAAT
Locus tag: Sama_1934
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -140 4.8 TTATGTGATGATTGTCAAAAAT Sama_1934
Shewanella baltica OS155
Position: -156
Score: 5.12551
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: Sbal_1864
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -156 5.1 TTATGTGATGATGATCAAAATT Sbal_1864
Shewanella denitrificans OS217
Position: -189
Score: 4.12923
Sequence: TTATGTGATTATGGGCCCAAAT
Locus tag: Sden_1625
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -189 4.1 TTATGTGATTATGGGCCCAAAT Sden_1625
Shewanella frigidimarina NCIMB 400
Position: -165
Score: 4.70241
Sequence: TTATGTGATTATGATCGAAAAT
Locus tag: Sfri_1733
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -165 4.7 TTATGTGATTATGATCGAAAAT Sfri_1733
Shewanella halifaxensis HAW-EB4
Position: -155
Score: 5.01352
Sequence: TTATGTGATGATAATCAAAATT
Locus tag: Shal_1832
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -155 5 TTATGTGATGATAATCAAAATT Shal_1832
Shewanella loihica PV-4
Position: -149
Score: 4.86581
Sequence: TTGTGTGATGATGTTCAAAATT
Locus tag: Shew_2188
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -149 4.9 TTGTGTGATGATGTTCAAAATT Shew_2188
Shewanella oneidensis MR-1
Position: -155
Score: 5.12551
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: SO2581
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -155 5.1 TTATGTGATGATGATCAAAATT SO2581
Shewanella pealeana ATCC 700345
Position: -156
Score: 5.01352
Sequence: TTATGTGATGATAATCAAAATT
Locus tag: Spea_2448
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -156 5 TTATGTGATGATAATCAAAATT Spea_2448
Shewanella piezotolerans WP3
Position: -153
Score: 5.00694
Sequence: ATATGTGATGATAATCAAAATT
Locus tag: swp_2289
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -153 5 ATATGTGATGATAATCAAAATT swp_2289
Shewanella putrefaciens CN-32
Position: -154
Score: 5.12551
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: Sputcn32_1761
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -154 5.1 TTATGTGATGATGATCAAAATT Sputcn32_1761
Shewanella sediminis HAW-EB3
Position: -151
Score: 5.02801
Sequence: TTATGTGATGATGATCATAATT
Locus tag: Ssed_2523
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -151 5 TTATGTGATGATGATCATAATT Ssed_2523
Shewanella sp ANA-3
Position: -155
Score: 5.12551
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: Shewana3_2386
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -155 5.1 TTATGTGATGATGATCAAAATT Shewana3_2386
Shewanella sp MR-4
Position: -155
Score: 5.12551
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: Shewmr4_2177
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -155 5.1 TTATGTGATGATGATCAAAATT Shewmr4_2177
Shewanella sp MR-7
Position: -155
Score: 5.12551
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: Shewmr7_2254
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -155 5.1 TTATGTGATGATGATCAAAATT Shewmr7_2254
Shewanella sp W3-18-1
Position: -154
Score: 5.12551
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: Sputw3181_2264
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -154 5.1 TTATGTGATGATGATCAAAATT Sputw3181_2264
Shewanella woodyi ATCC 51908
Position: -153
Score: 5.07027
Sequence: TTATGTGATGATGTTCAAAATT
Locus tag: Swoo_2110
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1 -153 5.1 TTATGTGATGATGTTCAAAATT Swoo_2110
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