Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO2010 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -51
Score: 4.3278
Sequence: TTTTGTGAGCTGCATCACGGCA
Locus tag: Sama_1307
Name: null
Funciton: hypothetical protein
Sama_1307 -51 4.3 TTTTGTGAGCTGCATCACGGCA Sama_1307
Shewanella baltica OS155
Position: -65
Score: 4.96559
Sequence: TTTTGTGATCTAAATCACTGTA
Locus tag: Sbal_2577
Name: null
Funciton: hypothetical protein
Sbal_2577 -65 5 TTTTGTGATCTAAATCACTGTA Sbal_2577
Shewanella denitrificans OS217
Position: -81
Score: 4.80876
Sequence: AAATGTGATCCAGCTCAGCTTT
Locus tag: Sden_2384
Name: null
Funciton: hypothetical protein
Sden_2384 -81 4.8 AAATGTGATCCAGCTCAGCTTT Sden_2384
Shewanella frigidimarina NCIMB 400
Position: -116
Score: 4.84249
Sequence: TTTTGTGATCGACTTCACGTCT
Locus tag: Sfri_2410
Name: null
Funciton: hypothetical protein
Sfri_2410 -116 4.8 TTTTGTGATCGACTTCACGTCT Sfri_2410
Shewanella halifaxensis HAW-EB4
Position: -80
Score: 4.02505
Sequence: TAGTGTGATTGATATCTATAAT
Locus tag: Shal_1587
Name: null
Funciton: hypothetical protein
Shal_1587 -80 4 TAGTGTGATTGATATCTATAAT Shal_1587
Shewanella loihica PV-4
Position: -48
Score: 4.08426
Sequence: AAAATTGATCTAGATCAATAAA
Locus tag: Shew_2238
Name: null
Funciton: hypothetical protein
Shew_2238 -48 4.1 AAAATTGATCTAGATCAATAAA Shew_2238
Shewanella oneidensis MR-1
Position: -70
Score: 4.66386
Sequence: TTTTGTGATCTTCGTCACTGTA
Locus tag: SO2010
Name: null
Funciton: hypothetical protein
SO2010 -70 4.7 TTTTGTGATCTTCGTCACTGTA SO2010
Shewanella pealeana ATCC 700345
Position: -51
Score: 4.08426
Sequence: AAAATTGATCTAGATCAATAAA
Locus tag: Spea_1505
Name: null
Funciton: hypothetical protein
Spea_1505 -51 4.1 AAAATTGATCTAGATCAATAAA Spea_1505
Shewanella piezotolerans WP3
Position: -21
Score: 4.08426
Sequence: AAAATTGATCTAGATCAATAAA
Locus tag: swp_1711
Name: null
Funciton: hypothetical protein
swp_1711 -21 4.1 AAAATTGATCTAGATCAATAAA swp_1711
Shewanella putrefaciens CN-32
Position: -65
Score: 5.08961
Sequence: TTTTGTGATCTCCATCACCGTT
Locus tag: Sputcn32_2305
Name: null
Funciton: hypothetical protein
Sputcn32_2305 -65 5.1 TTTTGTGATCTCCATCACCGTT Sputcn32_2305
Shewanella sediminis HAW-EB3
Position: -49
Score: 4.08426
Sequence: AAAATTGATCTAGATCAATAAA
Locus tag: Ssed_2855
Name: null
Funciton: hypothetical protein
Ssed_2855 -49 4.1 AAAATTGATCTAGATCAATAAA Ssed_2855
Shewanella sp MR-4
Position: -65
Score: 4.85361
Sequence: TTTTGTGATCTTAATCACTGTA
Locus tag: Shewmr4_2257
Name: null
Funciton: hypothetical protein
Shewmr4_2257 -65 4.9 TTTTGTGATCTTAATCACTGTA Shewmr4_2257
Shewanella sp MR-7
Position: -65
Score: 4.85361
Sequence: TTTTGTGATCTTAATCACTGTA
Locus tag: Shewmr7_2329
Name: null
Funciton: hypothetical protein
Shewmr7_2329 -65 4.9 TTTTGTGATCTTAATCACTGTA Shewmr7_2329
Shewanella sp W3-18-1
Position: -65
Score: 5.08961
Sequence: TTTTGTGATCTCCATCACCGTT
Locus tag: Sputw3181_1703
Name: null
Funciton: hypothetical protein
Sputw3181_1703 -65 5.1 TTTTGTGATCTCCATCACCGTT Sputw3181_1703
Shewanella woodyi ATCC 51908
Position: -48
Score: 4.09084
Sequence: TAAATTGATCTAGATCAATAAA
Locus tag: Swoo_1790
Name: null
Funciton: hypothetical protein
Swoo_1790 -48 4.1 TAAATTGATCTAGATCAATAAA Swoo_1790
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