Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing mdh gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -46
Score: 3.78342
Sequence: TTTGAGGATCTACCTCACAAAT
Locus tag: Sama_0672
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 3.8 TTTGAGGATCTACCTCACAAAT Sama_0672
Shewanella baltica OS155
Position: -46
Score: 4.29841
Sequence: AAATTAGATCCATGTCACACAT
Locus tag: Sbal_0609
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 4.3 AAATTAGATCCATGTCACACAT Sbal_0609
Shewanella frigidimarina NCIMB 400
Position: -45
Score: 4.154
Sequence: AATTTAGATCTATGTCACAAAC
Locus tag: Sfri_3173
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -45 4.2 AATTTAGATCTATGTCACAAAC Sfri_3173
Shewanella halifaxensis HAW-EB4
Position: -46
Score: 3.88457
Sequence: AAGATGGATCTGAATCACAAAA
Locus tag: Shal_0903
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 3.9 AAGATGGATCTGAATCACAAAA Shal_0903
Shewanella loihica PV-4
Position: -47
Score: 4.46978
Sequence: AATCTAGATCTATATCACATAA
Locus tag: Shew_0867
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -47 4.5 AATCTAGATCTATATCACATAA Shew_0867
Shewanella oneidensis MR-1
Position: -47
Score: 4.29841
Sequence: AAATTAGATCCATGTCACACAT
Locus tag: SO0770
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -47 4.3 AAATTAGATCCATGTCACACAT SO0770
Shewanella piezotolerans WP3
Position: -46
Score: 3.92088
Sequence: AAAACAGATCTAAATCACAAAA
Locus tag: swp_4100
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 3.9 AAAACAGATCTAAATCACAAAA swp_4100
Shewanella putrefaciens CN-32
Position: -46
Score: 3.97202
Sequence: AAACTAGATCCATGTCACACAT
Locus tag: Sputcn32_3219
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 4 AAACTAGATCCATGTCACACAT Sputcn32_3219
Shewanella sediminis HAW-EB3
Position: -136
Score: 4.08545
Sequence: TTTATTGATGTAGAACAAAAAT
Locus tag: Ssed_0952
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -136 4.1 TTTATTGATGTAGAACAAAAAT Ssed_0952
Shewanella sp ANA-3
Position: -46
Score: 4.29841
Sequence: AAATTAGATCCATGTCACACAT
Locus tag: Shewana3_3509
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 4.3 AAATTAGATCCATGTCACACAT Shewana3_3509
Shewanella sp MR-4
Position: -46
Score: 4.29841
Sequence: AAATTAGATCCATGTCACACAT
Locus tag: Shewmr4_3339
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 4.3 AAATTAGATCCATGTCACACAT Shewmr4_3339
Shewanella sp MR-7
Position: -46
Score: 4.29841
Sequence: AAATTAGATCCATGTCACACAT
Locus tag: Shewmr7_0614
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 4.3 AAATTAGATCCATGTCACACAT Shewmr7_0614
Shewanella sp W3-18-1
Position: -46
Score: 3.97202
Sequence: AAACTAGATCCATGTCACACAT
Locus tag: Sputw3181_0722
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -46 4 AAACTAGATCCATGTCACACAT Sputw3181_0722
Shewanella woodyi ATCC 51908
Position: -47
Score: 3.82399
Sequence: AATGTAGACCTACATCACAAAA
Locus tag: Swoo_1002
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh -47 3.8 AATGTAGACCTACATCACAAAA Swoo_1002
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