Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Staphylococcus carnosus subsp. carnosus TM300

Type Regulator Effector Pathway Genes Sites
TF ArcR Arginine Arginine degradation 2 2
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 7 22
TF BirA Biotin Biotin biosynthesis 3 3
TF CcpA HPr, phosphocarrier protein; Fructose-1,6-diphosphate Carbon catabolism 58 72
TF CggR Fructose-1,6-diphosphate Glycolysis 1 1
TF CodY Branched-chain amino acids Amino acid metabolism 67 137
TF CymR O-acetyl-L-serine; CysK, cysteine synthetase Cysteine metabolism 9 12
TF CzrA Zinc ion, (Zn2+) Zinc resistance 1 1
TF FapR Malonyl-CoA; Malonyl-ACP Fatty acid biosynthesis 3 3
TF FruR Fructose-6-phosphate Fructose utilization 1 2
TF Fur Iron ion, (Fe2+) Iron homeostasis 14 22
TF GlnR Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 1 1
TF GltC 2-oxoglutarate; Glutamate Glutamate metabolism 2 4
TF GntR Gluconate Gluconate utilization 1 1
TF HisR Histidine Histidine biosynthesis 4 6
TF HrcA Heat shock Heat shock response 2 2
TF HutR Histidine Histidine utilization 1 1
TF LexA DNA damage SOS response 8 11
TF MepR Bis-indoles; Distamycin Multidrug resistance 2 2
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 2 2
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF MurR N-acetylmuramate-6-phosphate N-acetylmuramate utilization 1 1
TF NanR N-acetylmannosamine-6-phosphate Sialic acid utilization; N-acetylglucosamine utilization 4 4
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 3
TF NreC NreB, sensor histidine kinase (Nitrate, Nitrite) Nitrate and nitrite respiration 3 3
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response 7 11
TF Rex NADH Energy metabolism 10 11
TF SaeR SaeS, sensor histidine kinase Virulence 1 1
TF YtrA Hypothetical ABC transporter 1 2
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 8 8