Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BirA regulog to Staphylococcus carnosus subsp. carnosus TM300

Reference regulog properties
Source regulog: BirA - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus carnosus subsp. carnosus TM300
Orthologous TF(s) Sca_1090
Regulated genes 3
Built upon 21 sites [see more]
Predicted regulatory interactions in Staphylococcus carnosus subsp. carnosus TM300
Locus tag Position Score Sequence
Position: -75
Score: 7.3
Sequence: AATGTAAACTTTTAGTAAATTCAAGTTAACAAT
Locus tag: Sca_1775
Sca_1775 -75 7.3 AATGTAAACTTTTAGTAAATTCAAGTTAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY
Ortholog function: biotin transporter BioY
Staphylococcus aureus subsp. aureus N315 SA2077 -75 7.5 ATTGTAAACTTTTCATTTCTTAAAGTTTACAAT
Staphylococcus capitis SK14 STACA0001_1211 -70 7.8 TATGTAAACTTTTTATTTCTTAAAGTTTACATT
Staphylococcus epidermidis ATCC 12228 SE1856 -70 6.9 ATTGTAAACTTTCCATTCATAAAAGTTTACAAG
Staphylococcus carnosus subsp. carnosus TM300 Sca_1775 -75 7.3 AATGTAAACTTTTAGTAAATTCAAGTTAACAAT
Staphylococcus haemolyticus JCSC1435 SH0770 -69 8.2 AATGTAAACTTTTTATTTTATAAAGTTTACATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0625 -67 8.1 AATGTAAACTTTTTATTTTTTAAAGTTTACATT
Macrococcus caseolyticus JCSC5402 MCCL_0134 -75 6.7 ATTGTTAACTTTTTGTACTAAAAGGTTAACGAA
Position: -63
Score: 7.4
Sequence: AATGTTAACTATATAAAAAAATAAGTTAACAAT
Locus tag: Sca_2002
Sca_2002 -63 7.4 AATGTTAACTATATAAAAAAATAAGTTAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioB
Ortholog function: biotin synthase
Staphylococcus aureus subsp. aureus N315 SA2213 -55 7.9 AATGTAAACTTATTAATTATAAAAGTTTACATT
Staphylococcus capitis SK14 STACA0001_0034 -87 8 AATGTAAACTTATAAATATATAAAGTTTACATT
Staphylococcus epidermidis ATCC 12228 SE0234 -110 7.9 AATGTAAACTTATAAATATATAAAGTTTACAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2002 -63 7.4 AATGTTAACTATATAAAAAAATAAGTTAACAAT
Staphylococcus haemolyticus JCSC1435 SH0269 -75 8 AATGTAAACTTATTTATATATAAAGTTTACATT
Macrococcus caseolyticus JCSC5402 MCCL_0376 -76 6.8 ATTGTTAACTTATATTCAAAATTAGTTTACAAT
Position: -73
Score: 8
Sequence: AATGTAAACTTATAAAAATTAAAAGTTTACATT
Locus tag: Sca_2225
Sca_2225 -73 8 AATGTAAACTTATAAAAATTAAAAGTTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY
Ortholog function: putative biotin synthase
Staphylococcus carnosus subsp. carnosus TM300 Sca_2225 -73 8 AATGTAAACTTATAAAAATTAAAAGTTTACATT
© 2009-2020 RegPrecise