Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Staphylococcus carnosus subsp. carnosus TM300

Reference regulog properties
Source regulog: CodY - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor
Biological process: Amino acid metabolism
Effector: Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus carnosus subsp. carnosus TM300
Orthologous TF(s) Sca_0890
Regulated genes 67
Built upon 516 sites [see more]
Predicted regulatory interactions in Staphylococcus carnosus subsp. carnosus TM300
Locus tag Position Score Sequence
Position: -257
Score: 4.4
Sequence: AAATGTCAGAATTTT
Locus tag: Sca_0010
Sca_0010 -257 4.4 AAATGTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtnE
Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway
Staphylococcus aureus subsp. aureus N315 SA2347 -205 4.8 ATTAATCTGAAAATT
Staphylococcus capitis SK14 STACA0001_0934 -212 4.2 AAATGTTTGAAAATA
-93 4.6 ACTTATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2122 -61 4.4 TTATTTCAGAAAATT
-52 4.5 AAAATTCTAACTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0010 -257 4.4 AAATGTCAGAATTTT
Staphylococcus haemolyticus JCSC1435 SH0492 -253 4.5 ATAAATCTGAAAATT
-244 4.4 AAAATTATAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0294 -203 4.3 AATATTCTGATAAAA
Macrococcus caseolyticus JCSC5402 MCCL_0180 -222 4.8 AATATTCTGAATACT
Position: -192
Score: 5.1
Sequence: AATTTTCAGAATAAT
Position: -115
Score: 4.9
Sequence: AATTTTTTGAATTTT
Locus tag: Sca_0015
Sca_0015 -192 5.1 AATTTTCAGAATAAT
-115 4.9 AATTTTTTGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0348
Ortholog function: putative transcriptional regulator
Staphylococcus aureus subsp. aureus N315 SA0348 -176 5.1 ATTATTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_1417 -209 4.9 ACTTTTCTGAAAATT
-75 4.8 AATTTTTAAAATAAT
Staphylococcus epidermidis ATCC 12228 SE2378 -210 5.1 ATTTTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0015 -192 5.1 AATTTTCAGAATAAT
-115 4.9 AATTTTTTGAATTTT
Staphylococcus haemolyticus JCSC1435 SH2634 -279 4.9 ACTTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2412 -127 4.6 ACTTATCTGAAAATT
Position: -34
Score: 4.3
Sequence: AATAATATAAATATT
Locus tag: Sca_0040
Sca_0040 -34 4.3 AATAATATAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE2356
Ortholog function: 2-oxo-hepta-3-ene-1,7-dioate hydratase
Staphylococcus capitis SK14 STACA0001_1448 -29 4.8 AATTTTCAGATATTT
Staphylococcus epidermidis ATCC 12228 SE2356 -32 5.1 AATTTTCAGATAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0040 -34 4.3 AATAATATAAATATT
Staphylococcus haemolyticus JCSC1435 SH2591 -28 4.8 AATTTTCAGATATTT
Position: -140
Score: 4.3
Sequence: AATATTTATATTATT
Locus tag: Sca_0041
Sca_0041 -140 4.3 AATATTTATATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0367
Ortholog function: putative NADPH-flavin oxidoreductase
Staphylococcus aureus subsp. aureus N315 SA0367 -121 4.2 AATATTTTTAAAAGT
Staphylococcus capitis SK14 STACA0001_1449 -145 4.8 AAATATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2355 -114 5.1 AATTATCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0041 -140 4.3 AATATTTATATTATT
Staphylococcus haemolyticus JCSC1435 SH2590 -144 4.8 AAATATCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2331 -193 4.3 AATAATTTAACTATT
Position: -80
Score: 4.6
Sequence: TATTTTCAGACAATT
Locus tag: Sca_0058
Sca_0058 -80 4.6 TATTTTCAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysH
Ortholog function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
Staphylococcus capitis SK14 STACA0001_1812 -72 4.7 ATTATTCTGACAATT
Staphylococcus epidermidis ATCC 12228 SE2181 -69 4.7 ATTATTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0058 -80 4.6 TATTTTCAGACAATT
Staphylococcus haemolyticus JCSC1435 SH0413 -69 4.7 ATTATTCTGACAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2409 -80 4.5 TATTTTCAAATAATT
Position: -68
Score: 4.6
Sequence: ATTATTCAGAAAATA
Locus tag: Sca_0065
Sca_0065 -68 4.6 ATTATTCAGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: butA
Ortholog function: acetoin reductase
Staphylococcus aureus subsp. aureus N315 SA0122 -102 4.7 AAATATCTGAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0065 -68 4.6 ATTATTCAGAAAATA
Position: -113
Score: 4.7
Sequence: AATTTTCAGATTTTT
Position: -39
Score: 4.5
Sequence: ATTATTCTAATTATT
Locus tag: Sca_0104
Sca_0104 -113 4.7 AATTTTCAGATTTTT
-39 4.5 ATTATTCTAATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltC
Ortholog function: transcription activator of glutamate synthase operon
Staphylococcus aureus subsp. aureus N315 SA0429 -169 4.4 CTTTTTTAGAATATT
-160 4.3 AATATTCTGATATTA
Staphylococcus capitis SK14 STACA0001_1493 -179 5 AATTTTCTGACAATT
-41 4.6 AAATTTTAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE2313 -171 5 AATTTTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0104 -113 4.7 AATTTTCAGATTTTT
-39 4.5 ATTATTCTAATTATT
Staphylococcus haemolyticus JCSC1435 SH2541 -138 5.4 AATTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2285 -118 5 AAAATTCTGAAAATT
Position: -117
Score: 4.5
Sequence: AATAATTAGAATAAT
Position: -43
Score: 4.7
Sequence: AAAAATCTGAAAATT
Locus tag: Sca_0105
Sca_0105 -117 4.5 AATAATTAGAATAAT
-43 4.7 AAAAATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase large subunit
Staphylococcus aureus subsp. aureus N315 SA0430 -35 4.3 TAATATCAGAATATT
-26 4.4 AATATTCTAAAAAAG
Staphylococcus capitis SK14 STACA0001_1494 -174 4.6 AAAATTCTAAAATTT
-36 5 AATTGTCAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2312 -35 5 AATTGTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0105 -117 4.5 AATAATTAGAATAAT
-43 4.7 AAAAATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2540 -34 5.4 AATTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2284 -34 5 AATTTTCAGAATTTT
Position: -92
Score: 4.8
Sequence: AATTTTCTAAAAACT
Locus tag: Sca_0215
Sca_0215 -92 4.8 AATTTTCTAAAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: branched-chain amino acid aminotransferase
Staphylococcus aureus subsp. aureus N315 SA0512 -92 5.2 AATTTTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0476 -101 4.4 TTTATTTTGAATATT
-92 4.7 AATATTTAGAAAACT
Staphylococcus epidermidis ATCC 12228 SE0318 -99 4.1 TCTATTTTGAATATT
-90 5.2 AATATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0215 -101 4.5 ATTTTTTTAAATTTT
-92 4.8 AATTTTCTAAAAACT
Staphylococcus haemolyticus JCSC1435 SH2449 -91 5.2 AATTTTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2163 -86 5.2 AATTTTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1855 -85 4.8 AATTTTCTAAAAACT
Position: -91
Score: 5.2
Sequence: AATATTCAGAATATT
Locus tag: Sca_0238
Sca_0238 -91 5.2 AATATTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sca_0238
Ortholog function: hypothetical protein
Staphylococcus carnosus subsp. carnosus TM300 Sca_0238 -91 5.2 AATATTCAGAATATT
-82 4.5 AATATTTAAAATATA
Position: -61
Score: 5
Sequence: AATTTTCAAAAAAAT
Locus tag: Sca_0240
Sca_0240 -61 5 AATTTTCAAAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE0357
Ortholog function: hypothetical protein
Staphylococcus capitis SK14 STACA0001_0445 -33 4.4 TAAATTCAAAATATT
-24 5 AATATTTTAAAAATT
Staphylococcus epidermidis ATCC 12228 SE0357 -139 4.8 AATTTTAAAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0240 -61 5 AATTTTCAAAAAAAT
Staphylococcus haemolyticus JCSC1435 SH2406 -248 4.5 AATTTTTTAACATTT
Position: -127
Score: 4.8
Sequence: AAATATCTGAAAATT
Locus tag: Sca_0283
Sca_0283 -127 4.8 AAATATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT
Ortholog function: 4-aminobutyrate aminotransferase
Staphylococcus aureus subsp. aureus N315 SA2397 -136 4 AAAATTCTTAATTAT
-127 4.5 AATTATCAGAATATA
Staphylococcus capitis SK14 STACA0001_0892 -175 4.7 AATATTTTAATAATT
-166 4.3 ATAATTCAGAAAATA
Staphylococcus epidermidis ATCC 12228 SE2148 -164 4.6 AATATTCTAAATTAT
-155 4.6 AATTATCAGAAAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0283 -127 4.8 AAATATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH0459 -145 4.6 ATTATTCAGAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0353 -218 4.6 ATTTTTCAGAATATA
Position: -120
Score: 4.8
Sequence: AATTTTCAGAATTAT
Locus tag: Sca_0294
Sca_0294 -120 4.8 AATTTTCAGAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0601
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0601 -400 5 AAAATTCAGAATATT
-391 4.1 AATATTTTTAATTAT
Staphylococcus capitis SK14 STACA0001_0382 -211 5 AAAATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0420 -206 5 AAAATTCAGAATATT
-197 4.1 AATATTTAAATTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0294 -120 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH2248 -172 5 AAAATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2074 -166 4.8 AAATTTCAGAATTTT
Position: -114
Score: 5.3
Sequence: AATATTCTGAAAATT
Position: -88
Score: 4.5
Sequence: TATTTTAAGAAAATT
Locus tag: Sca_0374
Sca_0374 -114 5.3 AATATTCTGAAAATT
-88 4.5 TATTTTAAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tppB
Ortholog function: di-tripepride ABC transporter
Staphylococcus aureus subsp. aureus N315 SA0682 -112 4.6 AATATTCTCAATATT
-103 4.1 AATATTTTTATTTTT
Staphylococcus capitis SK14 STACA0001_0301 -124 4.3 AATTGACTGAATATT
-115 4.5 AATATTCATATTATT
-98 4.8 TATTTTTTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0509 -107 4 CTTTTTTTAAATTTT
-98 5.2 AATTTTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0374 -114 5.3 AATATTCTGAAAATT
-88 4.5 TATTTTAAGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2166 -102 5 AAATTTCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1991 -118 4.1 AAATAACAGAATATT
-109 4.6 AATATTCTCAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0478 -117 4.6 AACTTTTTGAAAATT
-36 5.3 AATTTTCAGAATATT
Position: -53
Score: 5
Sequence: AATATTCAGAAATTT
Locus tag: Sca_0418
Sca_0418 -53 5 AATATTCAGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: brnQ2
Ortholog function: branched-chain amino acid transport system
Staphylococcus aureus subsp. aureus N315 SA0294 -55 4.5 ATTTTTCAGATTTTT
-46 4.5 ATTTTTTAAATTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0418 -53 5 AATATTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2299 -112 4.3 AATACTTTAAATATT
-103 4.1 AATATTATAAATTAT
-94 4.5 AATTATCTGACATTT
Position: -32
Score: 4.2
Sequence: AATTATTTTAAATTT
Position: 8
Score: 4
Sequence: AATTATTAGTATTTT
Locus tag: Sca_0457
Sca_0457 -32 4.2 AATTATTTTAAATTT
8 4 AATTATTAGTATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metQ
Ortholog function: Methionine ABC transporter, methionine-binding lipoprotein
Staphylococcus aureus subsp. aureus N315 SA0771 -272 4.6 ATTTGTTAGAAAATT
-263 4.2 AAAATTTAAAATAGT
Staphylococcus capitis SK14 STACA0001_0216 -272 4.6 ATTTGTTAGAAAATT
-263 4.4 AAAATTTAAAATAAT
Staphylococcus epidermidis ATCC 12228 SE0602 -275 4.6 ATTTGTTAGAAAATT
-266 4.4 AAAATTTAAAATAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0457 -282 4.7 ATTTATTAGAAAATT
-273 4.2 AAAATTTAAAATAGT
Staphylococcus haemolyticus JCSC1435 SH2045 -261 4.1 AAAAGTTAAAATAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1864 -274 4.6 ATTTGTTAGAAAATT
-265 4.4 AAAATTTAAAATAAT
Position: -33
Score: 4.5
Sequence: AAAATTCTAACTATT
Locus tag: Sca_0569
Sca_0569 -33 4.5 AAAATTCTAACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: argininosuccinate synthase
Staphylococcus aureus subsp. aureus N315 SA0822 -32 4.6 AATATTCAGATAACT
Staphylococcus capitis SK14 STACA0001_0165 -33 5 AAAATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0657 -180 4.5 AATTTACAGAAATTT
-171 4.3 AAATTTTAAAATATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0569 -33 4.5 AAAATTCTAACTATT
Staphylococcus haemolyticus JCSC1435 SH1989 -31 5.1 AATTTTCAGAAAAAT
Position: -113
Score: 5.2
Sequence: AATATTCTAAAAATT
Position: -56
Score: 4.9
Sequence: ATATTTCTGAAAATT
Locus tag: Sca_0588
Sca_0588 -113 5.2 AATATTCTAAAAATT
-56 4.9 ATATTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppB
Ortholog function: oligopeptide ABC transporter permease protein OppB
Staphylococcus aureus subsp. aureus N315 SA0845 -66 4.7 AGATTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0146 -36 4.2 AATATACATAATATT
-27 4.6 AATATTCTGAAAAAA
Staphylococcus epidermidis ATCC 12228 SE0680 -63 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0588 -113 5.2 AATATTCTAAAAATT
-65 4.2 AATATTAAAATATTT
-56 4.9 ATATTTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1970 -116 4.7 AATTTTGTGAAAATT
-60 4.9 ATATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1794 -56 4.8 ATATTTCTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0605 -186 4.8 AATTTTTAAAAAAAT
-132 4.8 AATCTTCTGAAAATT
Position: -116
Score: 5
Sequence: AATATTCAGAATTTT
Locus tag: Sca_0637
Sca_0637 -116 5 AATATTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisZ
Ortholog function: ATP phosphoribosyltransferase regulatory subunit
Staphylococcus aureus subsp. aureus N315 SA2472 -142 4.6 AATTTTCTGAAAAAG
Staphylococcus epidermidis ATCC 12228 SE0270 -115 5.1 AATTTTCTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0637 -125 4.2 ATTTTTATTAATATT
-116 5 AATATTCAGAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0431 -109 4.8 CATTTTCAGAATATT
Position: -145
Score: 4.6
Sequence: AATATTCTGACTTTT
Locus tag: Sca_0642
Sca_0642 -145 4.6 AATATTCTGACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: comK
Ortholog function: competence transcription factor
Staphylococcus aureus subsp. aureus N315 SA0882 -147 4.9 AATATTCTGACTATT
Staphylococcus capitis SK14 STACA0001_0106 -151 4.7 AATATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE0731 -147 4.7 AATATTCTGACATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0642 -145 4.6 AATATTCTGACTTTT
-136 4.1 ACTTTTTAAAAAATA
Staphylococcus haemolyticus JCSC1435 SH1926 -148 4.6 AATATTCTGACTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1755 -186 4.6 AATATTCAGACTTTT
-92 4.5 AAATTTATAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1546 -195 4.8 ATAATTCTGAAAATT
-186 4.4 AAAATTTAAATTATT
-86 4.7 AAATTTCTTAAAATT
Position: -82
Score: 4.6
Sequence: AAAAGTCAGAATATT
Locus tag: Sca_0643
Sca_0643 -82 4.6 AAAAGTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0883
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0883 -77 4.9 AATAGTCAGAATATT
Staphylococcus capitis SK14 STACA0001_0107 -83 4.7 AAATGTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0729 -82 4.7 AAATGTCAGAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0643 -178 4.2 AATTATAAAAATAAT
-91 4.1 TATTTTTTAAAAAGT
-82 4.6 AAAAGTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1925 -80 4.6 AAAAGTCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1756 -174 4.5 AATTTTTATAAATTT
-80 4.6 AAAAGTCTGAATATT
Position: -108
Score: 4.2
Sequence: TTTATTCTAAAATTT
Locus tag: Sca_0656
Sca_0656 -108 4.2 TTTATTCTAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: patA
Ortholog function: putative aminotransferase A
Staphylococcus aureus subsp. aureus N315 SA0902 -50 4.2 TAATTTCTAAATTTT
-41 4.4 AATTTTTAGACAATA
Staphylococcus capitis SK14 STACA0001_2317 -58 4.1 ACTATTTTAACAATT
Staphylococcus epidermidis ATCC 12228 SE0747 -59 4.1 ACTATTTAAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0656 -108 4.2 TTTATTCTAAAATTT
Staphylococcus haemolyticus JCSC1435 SH1916 -65 4.9 ATTATTCTAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1585 -86 4.3 AATGTTCTAATAATT
Position: -34
Score: 4.6
Sequence: AAAATTCAAATAATT
Locus tag: Sca_0740
Sca_0740 -34 4.6 AAAATTCAAATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pycA
Ortholog function: pyruvate carboxylase
Staphylococcus aureus subsp. aureus N315 SA0963 -41 4.6 ATTAGTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_2249 -42 4.6 ATTAGTTAGAAAATT
-33 4.4 AAAATTCAAAAAATA
Staphylococcus epidermidis ATCC 12228 SE0813 -40 4.1 TATTATCTAATTATT
-31 4.9 ATTATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0740 -34 4.6 AAAATTCAAATAATT
Staphylococcus haemolyticus JCSC1435 SH1838 -41 4.5 ATTAGTTAGAATATT
-32 4 AATATTCAAACTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1675 -38 4.7 ACTTTTTAGAAAATT
-29 4.1 AAAATTCAAAATTTA
Position: -65
Score: 4.6
Sequence: AATAGTCAGACAATT
Locus tag: Sca_0936
Sca_0936 -65 4.6 AATAGTCAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: appA
Ortholog function: oligopeptide transport system oligopeptide-binding protein AppA
Staphylococcus aureus subsp. aureus N315 SA0850 -93 4.1 AAATAACTGAATATT
-84 4.7 AATATTCTAAAAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0936 -65 4.6 AATAGTCAGACAATT
Position: -157
Score: 4.8
Sequence: AATTTACAGAAAATT
Locus tag: Sca_0958
Sca_0958 -157 4.8 AATTTACAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: HTH-type transcriptional regulator GlnR
Staphylococcus aureus subsp. aureus N315 SA1149 -187 4.4 ATTTATCAGATTATT
-178 4.2 ATTATTTTTAAAAAT
Staphylococcus capitis SK14 STACA0001_1553 -202 4.3 TTTTGTCAGAAAATT
-191 4.1 AATTATAAAATTATT
-150 4.2 ATTAATTAAAAATTT
Staphylococcus epidermidis ATCC 12228 SE0986 -194 4.8 AAATGTCTGAAAATT
-185 4.7 AAAATTTTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0958 -157 4.8 AATTTACAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1452 -179 4.2 ATTTTTTTGAATAAA
-157 4.9 AATTTTCTAATAATT
-56 4.4 ATTAATCTGATTATT
Position: -97
Score: 4.4
Sequence: AAAGTTCAAAAAATT
Locus tag: Sca_0969
Sca_0969 -97 4.4 AAAGTTCAAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: aspartokinase III
Staphylococcus aureus subsp. aureus N315 SA1163 -87 4.6 AATATTCAAAATATA
-35 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1570 -33 4.7 AATTTTCTGATTTTT
Staphylococcus epidermidis ATCC 12228 SE1008 -33 4.7 AATTTTCTGATTTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0969 -97 4.4 AAAGTTCAAAAAATT
-79 4.2 AATATGTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH1580 -35 4.7 AATTTTCTGATTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1439 -35 4.7 AATTTTCTGATTTTT
Position: -109
Score: 4.4
Sequence: AATTTTTTGAACTTT
Locus tag: Sca_0970
Sca_0970 -109 4.4 AATTTTTTGAACTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: homoserine dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1164 -170 4.7 AAAAATCAGAAAATT
-118 4.6 TATATTTTGAATATT
Staphylococcus capitis SK14 STACA0001_1571 -170 4.7 AAAAATCAGAAAATT
-91 4.3 AAAATTAAGAATAAT
Staphylococcus epidermidis ATCC 12228 SE1009 -170 4.7 AAAAATCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0970 -127 4.2 AAATTTCAACATATT
-109 4.4 AATTTTTTGAACTTT
Staphylococcus haemolyticus JCSC1435 SH1579 -178 4.7 AAAAATCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1438 -168 4.7 AAAAATCAGAAAATT
Position: -121
Score: 4.3
Sequence: TTTTTTCAGAATTTT
Position: -112
Score: 4.7
Sequence: AATTTTTTAAATTTT
Locus tag: Sca_0975
Sca_0975 -121 4.3 TTTTTTCAGAATTTT
-112 4.7 AATTTTTTAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocC
Ortholog function: amino acid permease
Staphylococcus aureus subsp. aureus N315 SA1169 -110 4.7 AAAAATCAGAAAATT
-101 4.1 AAAATTTTAATTTTT
Staphylococcus capitis SK14 STACA0001_1576 -112 5.1 AAATTTCAGAAAATT
-102 4.7 AAATTTTTAAATATT
Staphylococcus epidermidis ATCC 12228 SE1015 -112 4.6 AAATATCAGAAAAAT
-103 4.1 AAAAATTTAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0975 -121 4.3 TTTTTTCAGAATTTT
-112 4.7 AATTTTTTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH1574 -114 5.1 AAATTTCAGAAAATT
-105 4.4 AAAATTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1433 -111 4.4 AATATTTAAACATTT
Macrococcus caseolyticus JCSC5402 MCCL_0990 -56 4.4 AATTTTCTTAATTAT
Position: -350
Score: 4.1
Sequence: TTTTTTCAGTAAATT
Position: -340
Score: 4.3
Sequence: AAATTTCTAAAAATC
Locus tag: Sca_1037
Sca_1037 -350 4.1 TTTTTTCAGTAAATT
-340 4.3 AAATTTCTAAAAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lysC
Ortholog function: aspartokinase II
Staphylococcus carnosus subsp. carnosus TM300 Sca_1037 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1518 -344 4.1 ATTTTTCAGTCTATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1357 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: 27
Score: 4.2
Sequence: ATTATTCAATATATT
Locus tag: Sca_1041
Sca_1041 27 4.2 ATTATTCAATATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dapD
Ortholog function: tetrahydrodipicolinate acetyltransferase
Staphylococcus aureus subsp. aureus N315 SA1229 -45 5.2 AATATTCTAAAAATT
Staphylococcus capitis SK14 STACA0001_1643 -44 5 AATTTTCTTAAAATT
Staphylococcus epidermidis ATCC 12228 SE1077 -46 5.2 AATTTTCTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1041 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1514 -42 4.8 AATTTTTTTAAAATT
-33 4.3 AAAATTCAAACAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1353 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -96
Score: 4.7
Sequence: AATTTTCAGAAAGTT
Locus tag: Sca_1051
Sca_1051 -96 4.7 AATTTTCAGAAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: braB
Ortholog function: branched-chain amino acid transport system
Staphylococcus capitis SK14 STACA0001_1652 -85 4.7 AATTTTCTGAAATTA
Staphylococcus epidermidis ATCC 12228 SE1090 -87 5.1 AATTTTCTGAAATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1051 -96 4.7 AATTTTCAGAAAGTT
Staphylococcus haemolyticus JCSC1435 SH1502 -87 4.2 AATTTTCTGAAATCA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1343 -95 4.5 ATATTTTTAAATATT
-86 5 AATATTCTGAAATTT
Macrococcus caseolyticus JCSC5402 MCCL_1059 -84 4.9 AATATTCAGAAAATA
Position: -55
Score: 4.9
Sequence: TATTTTCAGAATATT
Locus tag: Sca_1329
Sca_1329 -55 4.9 TATTTTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1544
Ortholog function: putative phosphoserine transaminase
Staphylococcus aureus subsp. aureus N315 SA1544 -54 5.4 AATTTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0615 -53 5.2 AATATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE1400 -54 5 AATATTCAGAATTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1329 -55 4.9 TATTTTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1201 -55 5 AATTATCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1040 -55 4.9 TATTTTCTGAAAATT
Position: -96
Score: 4.2
Sequence: AAAAATCAGAATTAT
Position: -87
Score: 4.1
Sequence: AATTATCATAATTAT
Locus tag: Sca_1338
Sca_1338 -96 4.2 AAAAATCAGAATTAT
-87 4.1 AATTATCATAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: acetyl-CoA synthetase
Staphylococcus aureus subsp. aureus N315 SA1554 -78 4.6 AAAATTTTGAATAAT
-69 4.1 AATAATTAGAAATGT
Staphylococcus capitis SK14 STACA0001_0626 -78 4.3 AGATTTTTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1338 -96 4.2 AAAAATCAGAATTAT
-87 4.1 AATTATCATAATTAT
Staphylococcus haemolyticus JCSC1435 SH1189 -87 4.9 AATTATCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1030 -75 4.9 ATTATTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1409 -48 4.5 TATATTTTGAAAAAT
Position: -159
Score: 4.1
Sequence: ATAATTATGATAATT
Position: -150
Score: 4.2
Sequence: ATAATTCTGATTTTT
Locus tag: Sca_1339
Sca_1339 -159 4.1 ATAATTATGATAATT
-150 4.2 ATAATTCTGATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA1555 -114 4.1 ACATTTCTAATTATT
-105 4.6 ATTATTCAAAATTTT
-56 4.3 AATTTTCTATATAAT
Staphylococcus capitis SK14 STACA0001_0627 -110 4.3 ATTTTTCAAAAATCT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1339 -159 4.1 ATAATTATGATAATT
-150 4.2 ATAATTCTGATTTTT
Staphylococcus haemolyticus JCSC1435 SH1188 -92 4.9 AATTTTTAGATAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1029 -119 4.9 AATTTTCAAAATAAT
Macrococcus caseolyticus JCSC5402 MCCL_1410 -39 4.5 ATTTTTCAAAATATA
Position: -139
Score: 5.2
Sequence: AATTTTCAAAATATT
Locus tag: Sca_1398
Sca_1398 -139 5.2 AATTTTCAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sca_1398
Ortholog function: hypothetical protein
Staphylococcus carnosus subsp. carnosus TM300 Sca_1398 -139 5.2 AATTTTCAAAATATT
Position: -83
Score: 5.1
Sequence: AAATTTCAGAAAATT
Position: -74
Score: 4
Sequence: AAAATTTAAAAATTA
Position: -73
Score: 4
Sequence: AAATTTAAAAATTAT
Position: 14
Score: 4.1
Sequence: ATTATTTAAAACATT
Locus tag: Sca_1432
Sca_1432 -83 5.1 AAATTTCAGAAAATT
-74 4 AAAATTTAAAAATTA
-73 4 AAATTTAAAAATTAT
14 4.1 ATTATTTAAAACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artQ
Ortholog function: Arginine ABC transport system ArtQ
Staphylococcus aureus subsp. aureus N315 SA1675 -167 4.3 ATAATTATGAATATT
Staphylococcus capitis SK14 STACA0001_0720 6 4.2 AAAATTATTAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1432 -83 5.1 AAATTTCAGAAAATT
-74 4 AAAATTTAAAAATTA
Staphylococcus haemolyticus JCSC1435 SH1104 -72 4 CTTTTTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0937 -63 4.2 ATTATATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_1584 -87 4.3 AATTATTAGAACATT
Position: -101
Score: 5.3
Sequence: AATTTTCTGAATATT
Locus tag: Sca_1514
Sca_1514 -101 5.3 AATTTTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ltaE
Ortholog function: low specificity L-threonine aldolase
Staphylococcus capitis SK14 STACA0001_1558 -154 4.7 AATATTCAGAATTAT
Staphylococcus epidermidis ATCC 12228 SE0995 -149 5 AATATTCAGAAATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1514 -101 5.3 AATTTTCTGAATATT
Position: -316
Score: 4.8
Sequence: AATTTTAAAAAAATT
Position: -307
Score: 4.3
Sequence: AAAATTCTAATAAAT
Position: -250
Score: 4.9
Sequence: AATTTTTAGACAATT
Locus tag: Sca_1559
Sca_1559 -316 4.8 AATTTTAAAAAAATT
-307 4.3 AAAATTCTAATAAAT
-250 4.9 AATTTTTAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: dihydroxy-acid dehydratase
Staphylococcus aureus subsp. aureus N315 SA1858 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0526 -327 4.9 AATTGTTAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1654 -330 5.2 AATTTTTAGAAAATT
-321 4.1 AAAATTCTAAATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1559 -316 4.8 AATTTTAAAAAAATT
-307 4.3 AAAATTCTAATAAAT
Staphylococcus haemolyticus JCSC1435 SH0980 -321 4.4 AGTTGTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0825 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0860 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -52
Score: 4.8
Sequence: AAAATTCTAAATATT
Locus tag: Sca_1562
Sca_1562 -52 4.8 AAAATTCTAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvC
Ortholog function: alpha-keto-beta-hydroxylacil reductoisomerase
Staphylococcus aureus subsp. aureus N315 SA1861 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0523 -49 5.2 AATATTTTGAAAATT
-40 4.3 AAAATTAAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE1657 -50 4.9 ATTATTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1562 -52 4.8 AAAATTCTAAATATT
Staphylococcus haemolyticus JCSC1435 SH0977 -54 4.9 AATTTTAAGAATATT
-45 5.1 AATATTCTAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0822 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0858 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -176
Score: 4.1
Sequence: AATTTATTAAATTTT
Position: -167
Score: 4.1
Sequence: AATTTTCGAAAAAGT
Locus tag: Sca_1636
Sca_1636 -176 4.1 AATTTATTAAATTTT
-167 4.1 AATTTTCGAAAAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmrA
Ortholog function: N-acyl-L-amino acid amidohydrolase
Staphylococcus aureus subsp. aureus N315 SA1935 -143 4.5 AGTTATTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0837 -235 4.6 AATTGTAAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1731 -113 4.6 AATTGTAAGAAAATT
-102 4.2 AATTGTGTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1636 -176 4.1 AATTTATTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0902 -179 4.7 AATTTTCAAAATTAT
-52 4.5 AATATCCAAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0752 -190 4.1 TATTTTTATAAATTT
-181 4.6 AAATTTCAGAAAATG
Position: -90
Score: 5.2
Sequence: AATATTTAGAAAATT
Locus tag: Sca_1748
Sca_1748 -90 5.2 AATATTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sca_1748
Ortholog function: hypothetical protein
Staphylococcus carnosus subsp. carnosus TM300 Sca_1748 -90 5.2 AATATTTAGAAAATT
-81 4.2 AAAATTATAAAAAAT
Position: -126
Score: 4.6
Sequence: AATTTTCTTATAATT
Locus tag: Sca_1918
Sca_1918 -126 4.6 AATTTTCTTATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aapA
Ortholog function: D-serine/D-alanine/glycine transporter
Staphylococcus aureus subsp. aureus N315 SA2226 -108 4.3 TATATTTAAAAAAAT
Staphylococcus aureus subsp. aureus N315 SA2227 -108 4.3 TATATTTAAAAAAAT
Staphylococcus capitis SK14 STACA0001_1050 -166 4.8 AATTTTTTGATTATT
-157 4.7 ATTATTCTAAAAAAT
Staphylococcus epidermidis ATCC 12228 SE2004 -93 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1918 -126 4.6 AATTTTCTTATAATT
Staphylococcus haemolyticus JCSC1435 SH0623 -231 5.1 AATTTTCAGAAATTT
Position: -116
Score: 4.7
Sequence: AATTATCTGAATTTT
Position: -57
Score: 4.2
Sequence: TTTATTCAAAAAAAT
Locus tag: Sca_1975
Sca_1975 -116 4.7 AATTATCTGAATTTT
-57 4.2 TTTATTCAAAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ddh2
Ortholog function: D-lactate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA2346 -205 4.8 ATTAATCTGAAAATT
Staphylococcus capitis SK14 STACA0001_0935 -212 4.2 AAATGTTTGAAAATA
-93 4.6 ACTTATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2121 -61 4.4 TTATTTCAGAAAATT
-52 4.5 AAAATTCTAACTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1975 -116 4.7 AATTATCTGAATTTT
-57 4.2 TTTATTCAAAAAAAT
Staphylococcus haemolyticus JCSC1435 SH0493 -253 4.5 ATAAATCTGAAAATT
-244 4.4 AAAATTATAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0295 -203 4.3 AATATTCTGATAAAA
Position: -282
Score: 4.7
Sequence: CATATTTTGAAAATT
Position: -69
Score: 4.5
Sequence: TATTATCAGAATATT
Locus tag: Sca_2043
Sca_2043 -282 4.7 CATATTTTGAAAATT
-69 4.5 TATTATCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2357
Ortholog function: putative regulatory protein
Staphylococcus aureus subsp. aureus N315 SA2357 -188 4.2 CTTTATCTAAAAATT
-179 4.7 AAAATTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0926 -184 4.6 AATTATCTAAATTTT
-175 4.4 AATTTTCTGAAAACG
Staphylococcus epidermidis ATCC 12228 SE2129 -172 5.1 AATTTTCAGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2043 -282 4.7 CATATTTTGAAAATT
-69 4.5 TATTATCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0484 -156 5.3 AATATTCTGAAAATT
-147 4.1 AAAATTTAGAATTTG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0292 -65 5.3 AATATTCTGAAAATT
-56 4.2 AAAATTAAGAAAATA
Position: -112
Score: 4.5
Sequence: ATAATTCAGAATAAT
Locus tag: Sca_2121
Sca_2121 -112 4.5 ATAATTCAGAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ddh2
Ortholog function: D-lactate dehydrogenase
Macrococcus caseolyticus JCSC5402 MCCL_0071 -120 4.1 ATTAATTTAAATAAT
-111 4.5 AATAATCAAACAATT
Position: -105
Score: 5
Sequence: AAATTTCTGAATATT
Locus tag: Sca_2142
Sca_2142 -105 5 AAATTTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fmdA
Ortholog function: putative formamidase
Staphylococcus carnosus subsp. carnosus TM300 Sca_2142 -105 5 AAATTTCTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_1483 -61 4.9 AATATTCTGAAAACT
-29 4.1 TAATTTTAAAAATTT
Position: -34
Score: 4.1
Sequence: ATTTTTTAAAATAAA
Locus tag: Sca_2238
Sca_2238 -34 4.1 ATTTTTTAAAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: opuCC
Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCC
Staphylococcus capitis SK14 STACA0001_1038 -145 4.3 CATATTCAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE2016 -80 4.1 ATTTGTTTAACAATT
Staphylococcus haemolyticus JCSC1435 SH0608 -134 4.1 ATTAATTAAAATTTT
Position: -83
Score: 4.8
Sequence: AATTTTCAGAATTAT
Locus tag: Sca_2265
Sca_2265 -83 4.8 AATTTTCAGAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2261
Ortholog function: putative p-aminobenzoyl-glutamate transporter
Staphylococcus aureus subsp. aureus N315 SA2261 -75 4.9 CATTTTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1021 -78 5.1 AAATTTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2265 -83 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH0589 -75 5.1 AAATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0435 -75 4.9 TATTTTCAGAATATT
Position: -151
Score: 4
Sequence: ATTTTTGAAATAATT
Position: -28
Score: 4.1
Sequence: ATTATTCTAAATAAG
Locus tag: Sca_2336
Sca_2336 -151 4 ATTTTTGAAATAATT
-28 4.1 ATTATTCTAAATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: katA
Ortholog function: catalase
Staphylococcus aureus subsp. aureus N315 SA1170 -111 4.1 AAAAATTAAAATTTT
-102 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1577 -131 4.7 AATATTTAAAAATTT
-121 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE1016 -142 4.1 AATTGTTAAATTTTT
-133 4.6 ATTTTTCTGATATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2336 -28 4.1 ATTATTCTAAATAAG
Staphylococcus haemolyticus JCSC1435 SH1573 -123 4.4 AAAATTTTAAATTTT
-114 5.1 AATTTTCTGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1432 -129 4.4 AAATGTTTAAATATT
Position: -49
Score: 4.3
Sequence: AATATTTAGAAAACA
Locus tag: Sca_2353
Sca_2353 -49 4.3 AATATTTAGAAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: capD
Ortholog function: capsular polysaccharide synthesis enzyme Cap5D
Staphylococcus carnosus subsp. carnosus TM300 Sca_2353 -118 4.1 AATAATTAGAAATTG
-81 4.3 AAAAATTTGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0063 -125 4.5 CATATTTAAAAAATT
Position: -81
Score: 4.3
Sequence: AAAAATTTGAAATTT
Locus tag: Sca_2357
Sca_2357 -81 4.3 AAAAATTTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: capA
Ortholog function: capsular polysaccharide synthesis enzyme Cap5A
Staphylococcus carnosus subsp. carnosus TM300 Sca_2357 -118 4.1 AATAATTAGAAATTG
-81 4.3 AAAAATTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH0388 -367 4.6 TATATTTAAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0060 -125 4.5 CATATTTAAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_0668 -103 4.2 AATTGTATAAAAAAT
-63 4.3 AAATTATTGAATATT
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