Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Staphylococcus carnosus subsp. carnosus TM300

Reference regulog properties
Source regulog: Zur - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus carnosus subsp. carnosus TM300
Orthologous TF(s) Sca_1175
Regulated genes 8
Built upon 56 sites [see more]
Predicted regulatory interactions in Staphylococcus carnosus subsp. carnosus TM300
Locus tag Position Score Sequence
Position: -51
Score: 6.1
Sequence: TAAATCGAAATCATTACGCTTAA
Locus tag: Sca_0100
Sca_0100 -51 6.1 TAAATCGAAATCATTACGCTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sca_0100
Ortholog function: putative alkylmercury lyase
Staphylococcus capitis SK14 STACA0001_0760 -33 6.1 TAAATCGTAATAATTTCGATTGG
Staphylococcus carnosus subsp. carnosus TM300 Sca_0100 -51 6.1 TAAATCGAAATCATTACGCTTAA
Position: -36
Score: 7
Sequence: TAAATCGAAATTATTACGATTTA
Locus tag: Sca_0550
Sca_0550 -36 7 TAAATCGAAATTATTACGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0806
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0806 -42 6.4 TAAATCGTAACGATTACGCTTTA
Staphylococcus capitis SK14 STACA0001_0181 -52 6.8 TAAATAGTAATTATTTCGATTTA
Staphylococcus epidermidis ATCC 12228 SE0639 -42 7.2 TAAATCGTAATAATTACGTTTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0550 -36 7 TAAATCGAAATTATTACGATTTA
Staphylococcus haemolyticus JCSC1435 SH2006 -42 7.2 TAAATCGTAATTATTACGTTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1830 -40 7.4 TAAATCGTAATTATTACGATTTA
Position: -227
Score: 6.7
Sequence: ATAATCGTAATTATTACGATTTA
Locus tag: Sca_0976
Sca_0976 -227 6.7 ATAATCGTAATTATTACGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmG2
Ortholog function: 50S ribosomal protein L33
Staphylococcus aureus subsp. aureus N315 SAS042 -38 5.4 TAAATCGTAAAGATTCCTAACAA
Staphylococcus capitis SK14 STACA0001_1578 -43 5.3 TAAATCGTAAGAATTCCTAACAA
Staphylococcus epidermidis ATCC 12228 SE1017 -43 5.3 TAAATCGTAAGAATTCCTAACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0976 -227 6.7 ATAATCGTAATTATTACGATTTA
Staphylococcus haemolyticus JCSC1435 SH1572 -43 6.5 TAAATCGTAAGTATTCCTATTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1422 -39 7.1 TAAAACGTAATAATTACTATTTA
Position: -54
Score: 6.7
Sequence: TAAATCGTAATAATTACGATTAT
Locus tag: Sca_0977
Sca_0977 -54 6.7 TAAATCGTAATAATTACGATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpsN2
Ortholog function: 30S ribosomal protein S14
Staphylococcus aureus subsp. aureus N315 SA1171 -45 7.1 TAAATCGTAATAATTACGATTTG
Staphylococcus capitis SK14 STACA0001_1579 -42 7.2 TAAAACGTAATAATTACGATTTA
Staphylococcus epidermidis ATCC 12228 SE1018 -42 6.9 TAAAACGTAATTATTACGATTTG
Staphylococcus carnosus subsp. carnosus TM300 Sca_0977 -54 6.7 TAAATCGTAATAATTACGATTAT
Staphylococcus haemolyticus JCSC1435 SH1571 -43 7.2 TAAAACGTAATAATTACGATTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1421 -43 6.9 TAAAACGTAATAATTACGATTTG
Position: -65
Score: 6.2
Sequence: TTAATCGTAAGCATTACAATTTA
Locus tag: Sca_1177
Sca_1177 -65 6.2 TTAATCGTAAGCATTACAATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC
Ortholog function: Zinc ABC transporter, ATP-binding protein ZnuC
Staphylococcus aureus subsp. aureus N315 SA1385 -69 5.5 TGAGTCGTAAACATTACTGTTTA
Staphylococcus capitis SK14 STACA0001_1794 -66 6.1 TTAGTCGTAAACATTACTATTTA
Staphylococcus epidermidis ATCC 12228 SE1243 -58 5.8 ATAGTCGTAAACATTACTATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1177 -65 6.2 TTAATCGTAAGCATTACAATTTA
Staphylococcus haemolyticus JCSC1435 SH1360 -66 6.2 CAAGTCGTAAACATTACTATTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1200 -66 6.1 TAATTCGGAAACATTACTATTTA
Position: -83
Score: 6.4
Sequence: TAAAACATAACGATTACGATTTA
Locus tag: Sca_1906
Sca_1906 -83 6.4 TAAAACATAACGATTACGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2370
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2370 -69 7.4 TAAATCGTAATTATTACGATTTA
Staphylococcus epidermidis ATCC 12228 SE0191 -244 6.1 TAAATCGAAATTGTTACGCTTTA
-53 6.8 TAAATCGTAATAATTACGTTTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1906 -83 6.4 TAAAACATAACGATTACGATTTA
Position: -58
Score: 7.1
Sequence: TAAATCGTAATTATTACGATTAA
Locus tag: Sca_1955
Sca_1955 -58 7.1 TAAATCGTAATTATTACGATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Staphylococcus aureus subsp. aureus N315 SA0410 -50 6.4 TAAAACGGAATTATTCCTATTTA
Staphylococcus capitis SK14 STACA0001_1465 -43 7.1 TAAAACGTAATAATTACTATTTA
Staphylococcus epidermidis ATCC 12228 SE2335 -43 7.1 TAAAACGTAATAATTACTATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1955 -58 7.1 TAAATCGTAATTATTACGATTAA
Staphylococcus haemolyticus JCSC1435 SH0144 -44 7.2 TAAAACGTAATTATTACGATTTA
Position: -40
Score: 6.3
Sequence: TAAACCATAATGATTACGATTTG
Locus tag: Sca_1971
Sca_1971 -40 6.3 TAAACCATAATGATTACGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, periplasmic-binding protein ZnuA
Staphylococcus capitis SK14 STACA0001_0989 -36 5.3 ATAAACGAAATAATTACGCTTTG
Staphylococcus carnosus subsp. carnosus TM300 Sca_1971 -40 6.3 TAAACCATAATGATTACGATTTG
Staphylococcus haemolyticus JCSC1435 SH0551 -34 5.4 AAAAACGAATTTATTACGTTTTG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0388 -35 5.2 TTTAACGAAATAATTTCGATTTG
Macrococcus caseolyticus JCSC5402 MCCL_0992 -168 6.4 CAATTCGTAATCATTACGTTTTA
-35 5.7 TAAAACGTAACGATTACGAAATA
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