Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NanR regulog to Staphylococcus carnosus subsp. carnosus TM300

Reference regulog properties
Source regulog: NanR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Sialic acid utilization; N-acetylglucosamine utilization
Effector: N-acetylmannosamine-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus carnosus subsp. carnosus TM300
Orthologous TF(s) Sca_2391
Regulated genes 4
Built upon 18 sites [see more]
Predicted regulatory interactions in Staphylococcus carnosus subsp. carnosus TM300
Locus tag Position Score Sequence
Position: -176
Score: 6.3
Sequence: TTGAAAATTATTTTCAT
Locus tag: Sca_2389
Sca_2389 -176 6.3 TTGAAAATTATTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3)
Staphylococcus aureus subsp. aureus N315 SA0304 -132 6.1 TTGAAAAACATTTTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2389 -176 6.3 TTGAAAATTATTTTCAT
Staphylococcus haemolyticus JCSC1435 SH0282 -175 6.3 TTGAAAAATATTTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0375 -250 6.3 TTGAAAAATATTTTCAT
Position: -86
Score: 6.3
Sequence: ATGAAAATAATTTTCAA
Locus tag: Sca_2390
Sca_2390 -86 6.3 ATGAAAATAATTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanK
Ortholog function: N-acetylmannosamine kinase (EC 2.7.1.60)
Staphylococcus aureus subsp. aureus N315 SA0305 -42 6.1 ATGAAAATGTTTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2390 -86 6.3 ATGAAAATAATTTTCAA
Staphylococcus haemolyticus JCSC1435 SH0281 -84 6.3 ATGAAAATATTTTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0374 -90 6.3 ATGAAAATATTTTTCAA
Position: -58
Score: 6.3
Sequence: TTGAAAAAAATTTTCAT
Locus tag: Sca_2391
Sca_2391 -58 6.3 TTGAAAAAAATTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanR
Ortholog function: Sialic acid utilization regulator NanR, RpiR family
Staphylococcus aureus subsp. aureus N315 SA0306 -53 6.3 TTGAAAATATTTTTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2391 -58 6.3 TTGAAAAAAATTTTCAT
Staphylococcus haemolyticus JCSC1435 SH0280 -57 6.2 TTGAAAAATATTTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0373 -58 6.2 ATGAAAAACATTTTCAT
Position: -124
Score: 6.3
Sequence: ATGAAAATTTTTTTCAA
Locus tag: Sca_2392
Sca_2392 -124 6.3 ATGAAAATTTTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanE
Ortholog function: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Staphylococcus aureus subsp. aureus N315 SA0307 -103 6.3 ATGAAAAATATTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2392 -124 6.3 ATGAAAATTTTTTTCAA
Staphylococcus haemolyticus JCSC1435 SH0279 -132 6.2 TTGAAAATATTTTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0372 -125 6.2 ATGAAAATGTTTTTCAT
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