Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GltC regulog to Staphylococcus carnosus subsp. carnosus TM300

Reference regulog properties
Source regulog: GltC - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: Glutamate metabolism
Effector: 2-oxoglutarate; Glutamate
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus carnosus subsp. carnosus TM300
Orthologous TF(s) Sca_0104
Regulated genes 2
Built upon 24 sites [see more]
Predicted regulatory interactions in Staphylococcus carnosus subsp. carnosus TM300
Locus tag Position Score Sequence
Position: -57
Score: 5.1
Sequence: ATATAAATATTAGAT
Position: -35
Score: 5.4
Sequence: TTCTAATTATTAGAA
Locus tag: Sca_0104
Sca_0104 -57 5.1 ATATAAATATTAGAT
-35 5.4 TTCTAATTATTAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltC
Ortholog function: transcription activator of glutamate synthase operon
Staphylococcus aureus subsp. aureus N315 SA0429 -101 4.9 ATATATAAAATAGAA
-79 5.2 ATCTAAAAAATAGAA
Staphylococcus capitis SK14 STACA0001_1493 -119 5 ATATATAAATTAGAT
-97 5.2 ATCTAAAAAATAGAA
Staphylococcus epidermidis ATCC 12228 SE2313 -112 5 ATATATAAATTAGAT
-90 5.5 ATCTAATTATTAGAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0104 -57 5.1 ATATAAATATTAGAT
-35 5.4 TTCTAATTATTAGAA
Staphylococcus haemolyticus JCSC1435 SH2541 -78 5.2 ATATATTAATTAGAT
-56 5.4 TTCTAATAATTAGAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2285 -61 4.9 ATATATATAATAGAT
-39 5.4 TTCTAATTATTAGAA
Position: -121
Score: 5.4
Sequence: TTCTAATAATTAGAA
Position: -99
Score: 5.1
Sequence: ATCTAATATTTATAT
Locus tag: Sca_0105
Sca_0105 -121 5.4 TTCTAATAATTAGAA
-99 5.1 ATCTAATATTTATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase large subunit
Staphylococcus aureus subsp. aureus N315 SA0430 -116 5.2 TTCTATTTTTTAGAT
-94 4.9 TTCTATTTTATATAT
Staphylococcus capitis SK14 STACA0001_1494 -118 5.2 TTCTATTTTTTAGAT
-96 5 ATCTAATTTATATAT
Staphylococcus epidermidis ATCC 12228 SE2312 -116 5.5 TTCTAATAATTAGAT
-94 5 ATCTAATTTATATAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0105 -121 5.4 TTCTAATAATTAGAA
-99 5.1 ATCTAATATTTATAT
Staphylococcus haemolyticus JCSC1435 SH2540 -116 5.4 TTCTAATTATTAGAA
-94 5.2 ATCTAATTAATATAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2284 -113 5.4 TTCTAATAATTAGAA
-91 4.9 ATCTATTATATATAT