Regulog GltC - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator |
| Biological process: | Glutamate metabolism |
| Effector: | 2-oxoglutarate; Glutamate |
| Phylum: | Firmicutes |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - LysR
- By effector - 2-oxoglutarate
- By effector - Glutamate
- By pathway - Glutamate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 3 | 2 |
| Staphylococcus capitis SK14 | 3 | 2 |
| Staphylococcus epidermidis ATCC 12228 | 3 | 2 |
| Staphylococcus carnosus subsp. carnosus TM300 | 3 | 2 |
| Staphylococcus haemolyticus JCSC1435 | 3 | 2 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 3 | 2 |
| Macrococcus caseolyticus JCSC5402 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| gltC |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -79 score = 5.21268 sequence = ATCTAAAAAATAGAA Site: position = -101 score = 4.91241 sequence = ATATATAAAATAGAA Gene: SA0429: transcription activator of glutamate synthase operon |
*
Staphylococcus capitis SK14 Site: position = -119 score = 5.04229 sequence = ATATATAAATTAGAT Site: position = -97 score = 5.21268 sequence = ATCTAAAAAATAGAA Gene: STACA0001_1493: transcription activator of glutamate synthase operon |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -112 score = 5.04229 sequence = ATATATAAATTAGAT Site: position = -90 score = 5.45005 sequence = ATCTAATTATTAGAA Gene: SE2313: transcription activator of glutamate synthase operon |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -57 score = 5.14677 sequence = ATATAAATATTAGAT Site: position = -35 score = 5.42464 sequence = TTCTAATTATTAGAA Gene: Sca_0104: transcription activator of glutamate synthase operon |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -78 score = 5.17519 sequence = ATATATTAATTAGAT Site: position = -56 score = 5.42464 sequence = TTCTAATAATTAGAA Gene: SH2541: transcription activator of glutamate synthase operon |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -39 score = 5.42464 sequence = TTCTAATTATTAGAA Site: position = -61 score = 4.93782 sequence = ATATATATAATAGAT Gene: SSP2285: transcription activator of glutamate synthase operon |
|
transcription activator of glutamate synthase operon |
| CRON 2. | ||||||||
| gltB |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -116 score = 5.21268 sequence = TTCTATTTTTTAGAT Site: position = -94 score = 4.91241 sequence = TTCTATTTTATATAT Gene: SA0430: glutamate synthase large subunit |
*
Staphylococcus capitis SK14 Site: position = -96 score = 5.04229 sequence = ATCTAATTTATATAT Site: position = -118 score = 5.21268 sequence = TTCTATTTTTTAGAT Gene: STACA0001_1494: glutamate synthase large subunit |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -94 score = 5.04229 sequence = ATCTAATTTATATAT Site: position = -116 score = 5.45005 sequence = TTCTAATAATTAGAT Gene: SE2312: glutamate synthase large subunit |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -121 score = 5.42464 sequence = TTCTAATAATTAGAA Site: position = -99 score = 5.14677 sequence = ATCTAATATTTATAT Gene: Sca_0105: glutamate synthase large subunit |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -116 score = 5.42464 sequence = TTCTAATTATTAGAA Site: position = -94 score = 5.17519 sequence = ATCTAATTAATATAT Gene: SH2540: glutamate synthase large subunit |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -113 score = 5.42464 sequence = TTCTAATAATTAGAA Site: position = -91 score = 4.93782 sequence = ATCTATTATATATAT Gene: SSP2284: glutamate synthase large subunit |
|
glutamate synthase large subunit |
| gltD |
Gene: SA0431: glutamate synthase small subunit |
Gene: STACA0001_1495: glutamate synthase small subunit |
Gene: SE2311: glutamate synthase small subunit |
Gene: Sca_0106: glutamate synthase small subunit |
Gene: SH2539: glutamate synthase small subunit |
Gene: SSP2283: glutamate synthase small subunit |
|
glutamate synthase small subunit |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |