Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ArgR regulog to Staphylococcus carnosus subsp. carnosus TM300

Reference regulog properties
Source regulog: ArgR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor
Biological process: Arginine biosynthesis; Arginine degradation
Effector: Arginine
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus carnosus subsp. carnosus TM300
Orthologous TF(s) Sca_1144
Regulated genes 7
Built upon 65 sites [see more]
Predicted regulatory interactions in Staphylococcus carnosus subsp. carnosus TM300
Locus tag Position Score Sequence
Position: -99
Score: 4.3
Sequence: TTGTATATTTATGTAA
Locus tag: Sca_0569
Sca_0569 -99 4.3 TTGTATATTTATGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: argininosuccinate synthase
Staphylococcus aureus subsp. aureus N315 SA0822 -97 4.5 ATGAATAAATATGTAA
Staphylococcus capitis SK14 STACA0001_0165 -98 4.3 tTGaATAtTTATgtAa
Staphylococcus epidermidis ATCC 12228 SE0657 -96 4.5 ATGAATATTTATGTAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0569 -99 4.3 TTGTATATTTATGTAA
Staphylococcus haemolyticus JCSC1435 SH1989 -95 4.3 TTGTATATTTATGTAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1814 -110 4.5 ATGcATAtTTATgtAT
Macrococcus caseolyticus JCSC5402 MCCL_0587 -96 5.1 ATGAATAATTATACTT
-50 5 ATGTATATTAATTAAT
Position: -34
Score: 5.3
Sequence: ATGTATAAATATTCGT
Locus tag: Sca_1144
Sca_1144 -34 5.3 ATGTATAAATATTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahrC
Ortholog function: arginine repressor
Staphylococcus aureus subsp. aureus N315 SA1351 -47 4.1 ATGTGTTAAAATAAAT
-33 5.3 ATGTATAAATATTCGT
Staphylococcus capitis SK14 STACA0001_1758 -33 5 TTGTATAAATATTCGT
Staphylococcus epidermidis ATCC 12228 SE1201 -38 3.7 ATGTGTTAAAATCAAT
-24 5.3 ATGTATAAATATTCGT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1144 -34 5.3 ATGTATAAATATTCGT
Staphylococcus haemolyticus JCSC1435 SH1395 -33 4.8 TTGTATAATTATTCGA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1234 -33 5.3 ATGTATAAATATTCGT
Macrococcus caseolyticus JCSC5402 MCCL_1165 -29 4.6 ATGTATAAATATGCAC
Position: -56
Score: 4.4
Sequence: TTGCATATTAATACGT
Position: -36
Score: 4.2
Sequence: ATGTATAATAATTCTG
Locus tag: Sca_1432
Sca_1432 -56 4.4 TTGCATATTAATACGT
-36 4.2 ATGTATAATAATTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: artPQ
Ortholog function: Arginine ABC transporter, substrate-binding and permease protein
Staphylococcus aureus subsp. aureus N315 SA1675 -220 4.6 ATTGATAAAAATACAT
-181 4.6 ATGTATTAATATGTAT
-171 5.1 ATGTATAATTATGAAT
-165 4 AATTATGAATATTAAT
-161 4.1 ATGAATATTAATTAGG
Staphylococcus capitis SK14 STACA0001_0720 -61 4.3 TTGCATTATTATAAGT
-41 4.6 ATGTATAATAATGTAT
-31 4.5 ATGTATATTTATTTAG
Staphylococcus epidermidis ATCC 12228 SE1541 -45 4 ATTTATGTATAATAAT
-41 4.6 ATGTATAATAATGTAT
-31 5.1 ATGTATAATTATTAAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1432 -56 4.4 TTGCATATTAATACGT
-36 4.2 ATGTATAATAATTCTG
Staphylococcus haemolyticus JCSC1435 SH1104 -55 4.2 TTGTATATTAATGCGA
-35 4.2 GTGTATAATAATGAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0937 -57 4.2 TTGAATATTATTTCGT
-37 4.8 ATGTATAATAATGAAT
Macrococcus caseolyticus JCSC5402 MCCL_1584 -56 4.6 TTGTATAATTATTCTA
Position: -314
Score: 4.8
Sequence: ATAAATTAATATTCAT
Locus tag: Sca_2085
Sca_2085 -314 4.8 ATAAATTAATATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcA
Ortholog function: arginine deiminase
Staphylococcus carnosus subsp. carnosus TM300 Sca_2085 -314 4.8 ATAAATTAATATTCAT
Position: -282
Score: 4.9
Sequence: AAGAATAATTATACAA
Position: -176
Score: 5.1
Sequence: ATATATATTTATTCAT
Locus tag: Sca_2165
Sca_2165 -282 4.9 AAGAATAATTATACAA
-176 5.1 ATATATATTTATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cudT
Ortholog function: choline transporter
Staphylococcus aureus subsp. aureus N315 SA2408 -288 4.8 ATAAATAAATATTCGT
-267 4.8 ACGTATAAATATTCTT
-157 4.6 TTATATAAATATTCAA
-112 4.2 TTGCATTATTATTAAA
Staphylococcus epidermidis ATCC 12228 SE2168 -148 4.7 TTATATAATTATTCAA
-103 4.2 TTGCATTATTATTAAA
-26 3.7 ATAAATTAATATTAGG
Staphylococcus carnosus subsp. carnosus TM300 Sca_2165 -282 4.9 AAGAATAATTATACAA
-176 5.1 ATATATATTTATTCAT
-132 4.5 TTGCATTATTATAAAT
Staphylococcus haemolyticus JCSC1435 SH0426 -261 4.7 ATAAATATAAATTCAT
-133 4.9 ATATATATTTATTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0193 -274 4.9 ATGAATAAAGATACAT
-167 4.9 TTATATAAATATTCAT
-32 4.2 AGTTATAAAAATAAAT
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