Propagation of ArgR regulog to Staphylococcus carnosus subsp. carnosus TM300
| Source regulog: | ArgR - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor |
| Biological process: | Arginine biosynthesis; Arginine degradation |
| Effector: | Arginine |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Staphylococcus carnosus subsp. carnosus TM300 |
| Orthologous TF(s) | Sca_1144 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -99
Score: 4.3 Sequence: TTGTATATTTATGTAA
Locus tag: Sca_0569
|
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| Sca_0569 | -99 | 4.3 | TTGTATATTTATGTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: argininosuccinate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0822 | -97 | 4.5 | ATGAATAAATATGTAA |
| Staphylococcus capitis SK14 | STACA0001_0165 | -98 | 4.3 | tTGaATAtTTATgtAa |
| Staphylococcus epidermidis ATCC 12228 | SE0657 | -96 | 4.5 | ATGAATATTTATGTAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0569 | -99 | 4.3 | TTGTATATTTATGTAA |
| Staphylococcus haemolyticus JCSC1435 | SH1989 | -95 | 4.3 | TTGTATATTTATGTAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1814 | -110 | 4.5 | ATGcATAtTTATgtAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0587 | -96 | 5.1 | ATGAATAATTATACTT |
| -50 | 5 | ATGTATATTAATTAAT | ||
|
Position: -34
Score: 5.3 Sequence: ATGTATAAATATTCGT
Locus tag: Sca_1144
|
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| Sca_1144 | -34 | 5.3 | ATGTATAAATATTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ahrC | ||||
| Ortholog function: arginine repressor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1351 | -47 | 4.1 | ATGTGTTAAAATAAAT |
| -33 | 5.3 | ATGTATAAATATTCGT | ||
| Staphylococcus capitis SK14 | STACA0001_1758 | -33 | 5 | TTGTATAAATATTCGT |
| Staphylococcus epidermidis ATCC 12228 | SE1201 | -38 | 3.7 | ATGTGTTAAAATCAAT |
| -24 | 5.3 | ATGTATAAATATTCGT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1144 | -34 | 5.3 | ATGTATAAATATTCGT |
| Staphylococcus haemolyticus JCSC1435 | SH1395 | -33 | 4.8 | TTGTATAATTATTCGA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1234 | -33 | 5.3 | ATGTATAAATATTCGT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1165 | -29 | 4.6 | ATGTATAAATATGCAC |
|
Position: -56
Score: 4.4 Sequence: TTGCATATTAATACGT
Position: -36
Score: 4.2 Sequence: ATGTATAATAATTCTG
Locus tag: Sca_1432
|
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| Sca_1432 | -56 | 4.4 | TTGCATATTAATACGT | |
| -36 | 4.2 | ATGTATAATAATTCTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: artPQ | ||||
| Ortholog function: Arginine ABC transporter, substrate-binding and permease protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1675 | -220 | 4.6 | ATTGATAAAAATACAT |
| -181 | 4.6 | ATGTATTAATATGTAT | ||
| -171 | 5.1 | ATGTATAATTATGAAT | ||
| -165 | 4 | AATTATGAATATTAAT | ||
| -161 | 4.1 | ATGAATATTAATTAGG | ||
| Staphylococcus capitis SK14 | STACA0001_0720 | -61 | 4.3 | TTGCATTATTATAAGT |
| -41 | 4.6 | ATGTATAATAATGTAT | ||
| -31 | 4.5 | ATGTATATTTATTTAG | ||
| Staphylococcus epidermidis ATCC 12228 | SE1541 | -45 | 4 | ATTTATGTATAATAAT |
| -41 | 4.6 | ATGTATAATAATGTAT | ||
| -31 | 5.1 | ATGTATAATTATTAAA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1432 | -56 | 4.4 | TTGCATATTAATACGT |
| -36 | 4.2 | ATGTATAATAATTCTG | ||
| Staphylococcus haemolyticus JCSC1435 | SH1104 | -55 | 4.2 | TTGTATATTAATGCGA |
| -35 | 4.2 | GTGTATAATAATGAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0937 | -57 | 4.2 | TTGAATATTATTTCGT |
| -37 | 4.8 | ATGTATAATAATGAAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1584 | -56 | 4.6 | TTGTATAATTATTCTA |
|
Position: -314
Score: 4.8 Sequence: ATAAATTAATATTCAT
Locus tag: Sca_2085
|
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| Sca_2085 | -314 | 4.8 | ATAAATTAATATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: arcA | ||||
| Ortholog function: arginine deiminase | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2085 | -314 | 4.8 | ATAAATTAATATTCAT |
|
Position: -282
Score: 4.9 Sequence: AAGAATAATTATACAA
Position: -176
Score: 5.1 Sequence: ATATATATTTATTCAT
Locus tag: Sca_2165
|
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| Sca_2165 | -282 | 4.9 | AAGAATAATTATACAA | |
| -176 | 5.1 | ATATATATTTATTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cudT | ||||
| Ortholog function: choline transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2408 | -288 | 4.8 | ATAAATAAATATTCGT |
| -267 | 4.8 | ACGTATAAATATTCTT | ||
| -157 | 4.6 | TTATATAAATATTCAA | ||
| -112 | 4.2 | TTGCATTATTATTAAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE2168 | -148 | 4.7 | TTATATAATTATTCAA |
| -103 | 4.2 | TTGCATTATTATTAAA | ||
| -26 | 3.7 | ATAAATTAATATTAGG | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2165 | -282 | 4.9 | AAGAATAATTATACAA |
| -176 | 5.1 | ATATATATTTATTCAT | ||
| -132 | 4.5 | TTGCATTATTATAAAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0426 | -261 | 4.7 | ATAAATATAAATTCAT |
| -133 | 4.9 | ATATATATTTATTCAA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0193 | -274 | 4.9 | ATGAATAAAGATACAT |
| -167 | 4.9 | TTATATAAATATTCAT | ||
| -32 | 4.2 | AGTTATAAAAATAAAT | ||