Propagated regulons of Desulfovibrio desulfuricans G20
|
Type |
Regulator |
Effector |
Pathway |
Genes |
Sites |
TF |
ArsR |
Arsenate |
Arsenic resistance |
3 |
4 |
TF |
ArsR2 |
|
Arsenic resistance |
1 |
1 |
TF |
Dde_1200 |
|
|
1 |
1 |
TF |
DVU0309 |
|
|
2 |
2 |
TF |
DVU0539/DVU0946 |
|
|
1 |
1 |
TF |
DVU0569 |
|
Amino acid metabolism |
1 |
2 |
TF |
DVU1063 |
|
Motility |
7 |
10 |
TF |
DVU1419 |
|
|
1 |
1 |
TF |
DVU1964/DVU1967 |
|
|
1 |
3 |
TF |
DVU2106 |
|
Nitrogen fixation |
1 |
2 |
TF |
DVU2114 |
|
|
1 |
2 |
TF |
DVU2359 |
|
|
1 |
3 |
TF |
DVU2394 |
|
Energy metabolism |
1 |
1 |
TF |
DVU2644 |
|
Amino acid metabolism |
1 |
2 |
TF |
DVU2827 |
|
Pyruvate metabolism |
2 |
3 |
TF |
DVU2934 |
|
|
1 |
3 |
TF |
DVU3023 |
Lactate |
Lactate utilization |
1 |
2 |
TF |
DVUA0057 |
|
Biofilm formation |
4 |
5 |
TF |
FliA |
|
Motility |
8 |
3 |
TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
24 |
33 |
TF |
GlpR |
Glycerol 3-phosphate |
Glycerol utilization |
1 |
1 |
TF |
HcpR |
Nitric oxide |
Nitrosative stress response |
4 |
3 |
TF |
HmcR |
|
Energy metabolism |
1 |
2 |
TF |
HrsM |
|
|
1 |
1 |
TF |
LexA |
DNA damage |
SOS response |
4 |
4 |
TF |
LldR |
L-lactate |
Lactate utilization |
1 |
1 |
TF |
LysX |
|
Lysine biosynthesis |
3 |
2 |
TF |
ModE2 |
Molybdenum |
Molybdopterin biosynthesis; Molybdenum homeostasis |
7 |
9 |
TF |
NifA-1 |
|
Nitrogen assimilation |
9 |
23 |
TF |
NikR |
Nickel ion, (Ni2+) |
Nickel homeostasis |
3 |
4 |
TF |
OhcR |
|
Energy metabolism |
1 |
2 |
TF |
PhnF |
|
Phosphonate utilization |
2 |
2 |
TF |
PhoB |
Inorganic phosphate |
Phosphate metabolism |
9 |
5 |
TF |
PspF |
PspA regulatory protein |
Phage shock response |
1 |
2 |
TF |
Rex |
NADH |
Energy metabolism |
13 |
17 |
TF |
RpoH |
Heat shock |
Heat shock response |
4 |
2 |
TF |
RpoN |
|
Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism |
82 |
117 |
TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
5 |
8 |
TF |
SmtB |
|
Heavy metal resistance |
1 |
2 |
TF |
TmcR |
|
Energy metabolism |
1 |
2 |
TF |
TunR |
Molybdate; Tungsten |
Tungsten homeostasis; Molybdenum homeostasis |
3 |
3 |
TF |
ZraR |
Zinc ion, (Zn2+) |
Zinc homeostasis |
3 |
9 |
TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
1 |
1 |