Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TmcR regulog to Desulfovibrio desulfuricans G20

Reference regulog properties
Source regulog: TmcR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode:
Biological process: Energy metabolism
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans G20
Orthologous TF(s) Dde_3719
Regulated genes 1
Built upon 6 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans G20
Locus tag Position Score Sequence
Position: -244
Score: 6.1
Sequence: TTCTATACCAAACAGGTATAGTA
Position: -110
Score: 5.8
Sequence: ATGTCTACCCAAAAGATAGAGTT
Locus tag: Dde_3707
Dde_3707 -244 6.1 TTCTATACCAAACAGGTATAGTA
-110 5.8 ATGTCTACCCAAAAGATAGAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tmcD
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans G20 Dde_3707 -217 6.1 TTCTATACCAAACAGGTATAGTA
-149 5.3 TACTCCACCACTACAGTATAGTT
-83 5.8 ATGTCTACCCAAAAGATAGAGTT
Desulfovibrio vulgaris Hildenborough DVU0266 -182 5.9 TTGTCTACCATGACAGTAGTATT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2557 -195 5.7 AACTATACCATTGCAGTATACAA
-170 6.1 AAATCTACCACGCAAGTAGACTA