Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of DVUA0057 regulog to Desulfovibrio desulfuricans G20

Reference regulog properties
Source regulog: DVUA0057 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Biofilm formation
Effector:
Phylum: Proteobacteria/Delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans G20
Orthologous TF(s) Dde_0850
Regulated genes 4
Built upon 29 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans G20
Locus tag Position Score Sequence
Position: -167
Score: 5.2
Sequence: TGTCGACTTATCTGACA
Locus tag: Dde_0404
Dde_0404 -167 5.2 TGTCGACTTATCTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVUA0031
Ortholog function: protein of unknown function DUF1555
Desulfovibrio desulfuricans G20 Dde_0404 -274 4.2 TGTCGGAACTCATTACA
-167 5.2 TGTCGACTTATCTGACA
Desulfovibrio vulgaris Hildenborough DVUA0032 -257 4.5 TGTCGGAAAAGGCAACA
-168 4.9 TGTCGGATAGGTTGACA
Desulfovibrio vulgaris str. Miyazaki F DvMF_0693 -257 4.6 TGTCGGAAAAGACAACA
-169 4.6 TGTCGGATAGATTAACA
Position: -155
Score: 4.7
Sequence: TGTCGAAAAGTATTACA
Locus tag: Dde_2507
Dde_2507 -155 4.7 TGTCGAAAAGTATTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVUA0031
Ortholog function: protein of unknown function DUF1555
Desulfomicrobium baculatum DSM 4028 Dbac_2235 -139 4.8 TGTCGGAGAACTTTACA
Desulfovibrio desulfuricans G20 Dde_2510 -248 4.5 TGTCAGGTATTTTTACT
-229 4.6 TGTAATTATAATCGACA
-147 4.7 TGTCGCTTTTTTTTACA
Desulfovibrio desulfuricans G20 Dde_2509 -158 5.1 TGTCGGATTTATTTACA
Desulfovibrio desulfuricans G20 Dde_2507 -155 4.7 TGTCGAAAAGTATTACA
Position: -158
Score: 5.1
Sequence: TGTCGGATTTATTTACA
Locus tag: Dde_2509
Dde_2509 -158 5.1 TGTCGGATTTATTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVUA0031
Ortholog function: protein of unknown function DUF1555
Desulfomicrobium baculatum DSM 4028 Dbac_2235 -139 4.8 TGTCGGAGAACTTTACA
Desulfovibrio desulfuricans G20 Dde_2510 -248 4.5 TGTCAGGTATTTTTACT
-229 4.6 TGTAATTATAATCGACA
-147 4.7 TGTCGCTTTTTTTTACA
Desulfovibrio desulfuricans G20 Dde_2509 -158 5.1 TGTCGGATTTATTTACA
Desulfovibrio desulfuricans G20 Dde_2507 -155 4.7 TGTCGAAAAGTATTACA
Position: -229
Score: 4.6
Sequence: TGTAATTATAATCGACA
Position: -147
Score: 4.7
Sequence: TGTCGCTTTTTTTTACA
Locus tag: Dde_2510
Dde_2510 -229 4.6 TGTAATTATAATCGACA
-147 4.7 TGTCGCTTTTTTTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVUA0031
Ortholog function: protein of unknown function DUF1555
Desulfomicrobium baculatum DSM 4028 Dbac_2235 -139 4.8 TGTCGGAGAACTTTACA
Desulfovibrio desulfuricans G20 Dde_2510 -248 4.5 TGTCAGGTATTTTTACT
-229 4.6 TGTAATTATAATCGACA
-147 4.7 TGTCGCTTTTTTTTACA
Desulfovibrio desulfuricans G20 Dde_2509 -158 5.1 TGTCGGATTTATTTACA
Desulfovibrio desulfuricans G20 Dde_2507 -155 4.7 TGTCGAAAAGTATTACA
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