Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FliA regulog to Desulfovibrio desulfuricans G20

Reference regulog properties
Source regulog: FliA - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma70
Regulation mode:
Biological process: Motility
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans G20
Orthologous TF(s) Dde_0383
Regulated genes 8
Built upon 64 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans G20
Locus tag Position Score Sequence
Position: -135
Score: 7.8
Sequence: TAAAGTAA-(11)-GCCGATAG
Locus tag: Dde_1570
Dde_1570 -135 7.8 TAAAGTAA-(11)-GCCGATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: flaD
Ortholog function: flagellin, putative
Desulfovibrio desulfuricans G20 Dde_1570 -135 7.8 TAAAGTAA-(11)-GCCGATAG
Position: -85
Score: 6.7
Sequence: TAAAGTGA-(11)-GTCGATAG
Locus tag: Dde_1710
Dde_1710 -85 6.7 TAAAGTGA-(11)-GTCGATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: flaG
Ortholog function: flagellin FlaG, putative
Desulfovibrio desulfuricans G20 Dde_1710 -85 6.7 TAAAGTGA-(11)-GTCGATAG
Desulfovibrio magneticus RS-1 DMR_45550 -35 7.2 TAAAGACG-(12)-ACCGATAG
Desulfomicrobium baculatum DSM 4028 Dbac_2431 -63 7.3 TAAAGTTT-(11)-GACGATTA
Desulfohalobium retbaense DSM 5692 Dret_0632 -145 7.2 TAAAGGAA-(11)-TCCGATAA
Position: -90
Score: 7.5
Sequence: TAAAGCCG-(11)-GCCGATAT
Locus tag: Dde_2384
Dde_2384 -90 7.5 TAAAGCCG-(11)-GCCGATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0976
Ortholog function: response regulator receiver protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_1334 -67 8.2 TAAAGTTT-(11)-GCCGATGA
Desulfovibrio desulfuricans G20 Dde_2384 -90 7.5 TAAAGCCG-(11)-GCCGATAT