Regulog FliA - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | Sigma70 |
| Regulation mode: | |
| Biological process: | Motility |
| Effector: | |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Sigma70
- By pathway - Motility
| Genome | Genes | Operons |
|---|---|---|
| Desulfovibrio vulgaris Hildenborough | 16 | 10 |
| Desulfovibrio vulgaris str. Miyazaki F | 20 | 11 |
| Desulfovibrio desulfuricans G20 | 12 | 9 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 11 | 6 |
| Desulfovibrio piger ATCC 29098 | ||
| Desulfovibrio salexigens DSM 2638 | 11 | 5 |
| Desulfovibrio magneticus RS-1 | 16 | 9 |
| Lawsonia intracellularis PHE/MN1-00 | 6 | 3 |
| Desulfomicrobium baculatum DSM 4028 | 11 | 5 |
| Desulfohalobium retbaense DSM 5692 | 19 | 3 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| DVU2606 |
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Desulfovibrio vulgaris Hildenborough Site: position = -255 score = 6.43034 sequence = TCATGCTC-(11)-GCCGATGC Gene: DVU2606: hypothetical protein |
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hypothetical protein |
| DVU2607 |
Gene: DVU2607: hypothetical protein |
Gene: DvMF_1086: hypothetical protein |
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Gene: DMR_15690: hypothetical protein |
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hypothetical protein |
| motA-3 |
Gene: DVU2608: flagellar motor protein MotA |
Gene: DvMF_1085: flagellar motor protein MotA |
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*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -228 score = 6.58256 sequence = TAAAGCTT-(11)-GGCGTTAA Gene: Ddes_2179: flagellar motor protein MotA |
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Gene: DMR_15670: flagellar motor protein MotA |
Gene: LI0482: flagellar motor protein MotA |
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flagellar motor protein MotA |
| motB |
Gene: DVU2609: Flagellar motor rotation protein MotB |
Gene: DvMF_1084: Flagellar motor rotation protein MotB |
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Gene: Ddes_2180: Flagellar motor rotation protein MotB |
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Gene: DMR_15660: Flagellar motor rotation protein MotB |
Gene: LI0483: Flagellar motor rotation protein MotB |
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Flagellar motor rotation protein MotB |
| CRON 2. | |||||||||||
| Dret_0631 |
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*2
Desulfohalobium retbaense DSM 5692 Gene: Dret_0631: flagellin domain protein Site: position = -145 score = 7.21566 sequence = TAAAGGAA-(11)-TCCGATAA Gene: Dret_0630: flagellin domain protein |
flagellin domain protein |
| flaG |
Gene: DVU1442: flagellin FlaG, putative |
Gene: DvMF_0245: flagellin FlaG, putative |
*
Desulfovibrio desulfuricans G20 Site: position = -85 score = 6.69329 sequence = TAAAGTGA-(11)-GTCGATAG Gene: Dde_1710: flagellin FlaG, putative |
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*
Desulfovibrio magneticus RS-1 Site: position = -35 score = 7.16431 sequence = TAAAGACG-(12)-ACCGATAG Gene: DMR_45550: flagellin FlaG, putative |
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Desulfomicrobium baculatum DSM 4028 Site: position = -63 score = 7.33913 sequence = TAAAGTTT-(11)-GACGATTA Gene: Dbac_2431: flagellin FlaG, putative |
Gene: Dret_0632: flagellin FlaG, putative |
flagellin FlaG, putative |
| fliD |
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Desulfovibrio vulgaris Hildenborough Site: position = -127 score = 8.24579 sequence = TAAAGCTC-(12)-GCCGATAA Gene: DVU0863: Flagellar hook-associated protein FliD |
*2
Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1621: Flagellar hook-associated protein FliD Site: position = -127 score = 7.98278 sequence = TAAAGCCC-(12)-GCCGATAA Gene: DvMF_2912: Flagellar hook-associated protein FliD |
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Desulfovibrio desulfuricans G20 Site: position = -169 score = 8.48941 sequence = TAAAGTTC-(11)-GCCGATAA Gene: Dde_1120: Flagellar hook-associated protein FliD |
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3
Desulfovibrio salexigens DSM 2638 Gene: Desal_1249: Flagellar hook-associated protein FliD Gene: Desal_0944: Flagellar hook-associated protein FliD Gene: Desal_0515: Flagellar hook-associated protein FliD |
Gene: DMR_03980: Flagellar hook-associated protein FliD |
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Lawsonia intracellularis PHE/MN1-00 Site: position = -99 score = 7.0989 sequence = TAAACATA-(11)-TCCGATAA Gene: LI0211: Flagellar hook-associated protein FliD |
Gene: Dbac_2386: Flagellar hook-associated protein FliD |
Gene: Dret_0633: Flagellar hook-associated protein FliD |
Flagellar hook-associated protein FliD |
| Dret_0634 |
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Gene: Dret_0634: flagellar protein FliS |
flagellar protein FliS |
| Dret_0635 |
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Gene: Dret_0635: hypothetical protein |
hypothetical protein |
| Dret_0636 |
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Gene: Dret_0636: type IV pilus assembly PilZ |
type IV pilus assembly PilZ |
| hag |
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Gene: Ddes_2282: flagellin domain protein |
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Desulfovibrio magneticus RS-1 Site: position = -127 score = 7.00986 sequence = TAAAGAAC-(12)-GTCGATAT Gene: DMR_03990: flagellin domain protein |
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flagellin domain protein |
| fliS |
Gene: DVU0862: Flagellar biosynthesis protein FliS |
Gene: DvMF_2911: Flagellar biosynthesis protein FliS |
Gene: Dde_1119: Flagellar biosynthesis protein FliS |
Gene: Ddes_0529: Flagellar biosynthesis protein FliS |
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Desulfovibrio salexigens DSM 2638 Site: position = -50 score = 6.92282 sequence = TAAGGTTT-(12)-GCCGATCA Gene: Desal_1248: Flagellar biosynthesis protein FliS |
Gene: DMR_03970: Flagellar biosynthesis protein FliS |
Gene: LI0210: Flagellar biosynthesis protein FliS |
Gene: Dbac_2387: Flagellar biosynthesis protein FliS |
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Flagellar biosynthesis protein FliS |
| Dvul_2122 |
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Gene: DvMF_2909: hypothetical protein |
Gene: Dde_1117: hypothetical protein |
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Gene: Desal_1246: hypothetical protein |
Gene: DMR_03960: hypothetical protein |
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hypothetical protein |
| DvMF_2908 |
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Gene: DvMF_2908: MJ0042 family finger-like protein |
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Gene: DMR_03950: MJ0042 family finger-like protein |
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Gene: Dbac_2389: MJ0042 family finger-like protein |
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MJ0042 family finger-like protein |
| Dvul_2124 |
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Gene: DvMF_2907: conserved hypothetical protein |
Gene: Dde_1115: conserved hypothetical protein |
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Gene: Desal_1244: conserved hypothetical protein |
Gene: DMR_03940: conserved hypothetical protein |
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Gene: Dret_1952: conserved hypothetical protein |
conserved hypothetical protein |
| DVU0858 |
Gene: DVU0858: lipoprotein, putative |
Gene: DvMF_2906: lipoprotein, putative |
Gene: Dde_2573: lipoprotein, putative |
Gene: Ddes_0596: lipoprotein, putative |
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Gene: Desal_1243: lipoprotein, putative |
Gene: DMR_03930: lipoprotein, putative |
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Gene: Dbac_0245: lipoprotein, putative |
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lipoprotein, putative |
| DVU0861 |
Gene: DVU0861: glycosyl transferase, group 1 family protein |
Gene: DvMF_2910: glycosyl transferase, group 1 family protein |
Gene: Dde_1118: glycosyl transferase, group 1 family protein |
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Gene: Desal_1247: glycosyl transferase, group 1 family protein |
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Gene: LI0495: glycosyl transferase, group 1 family protein |
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glycosyl transferase, group 1 family protein |
| DVU0859 |
Gene: DVU0859: MJ0042 family finger-like protein |
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Gene: Dde_1116: MJ0042 family finger-like protein |
Gene: Ddes_0595: MJ0042 family finger-like protein |
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Gene: Desal_1245: MJ0042 family finger-like protein |
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Gene: LI0340: MJ0042 family finger-like protein |
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Gene: Dret_1951: MJ0042 family finger-like protein |
MJ0042 family finger-like protein |
| Dbac_2385 |
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*
Desulfomicrobium baculatum DSM 4028 Site: position = -110 score = 7.00699 sequence = TAAAGAAA-(11)-GCCGATTC Gene: Dbac_2385: flagellin domain protein |
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flagellin domain protein |
| Dbac_2388 |
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Gene: Dbac_2388: asparagine synthase (glutamine-hydrolyzing) |
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asparagine synthase (glutamine-hydrolyzing) |
| Ddes_0530 |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -176 score = 6.6169 sequence = TAAACCTT-(11)-GCCGTTAT Gene: Ddes_0530: flagellar hook-associated 2 domain protein |
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flagellar hook-associated 2 domain protein |
| CRON 3. | |||||||||||
| fliC |
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Desulfovibrio magneticus RS-1 Site: position = -223 score = 7.26265 sequence = TAAAGGGT-(11)-GCCGATAG Gene: DMR_12500: flagellin |
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flagellin |
| CRON 4. | |||||||||||
| flgM |
Gene: DVU0523: negative regulator of flagellin synthesis FlgM |
Gene: DvMF_2585: negative regulator of flagellin synthesis FlgM |
Gene: Dde_0638: negative regulator of flagellin synthesis FlgM |
Gene: Ddes_2005: negative regulator of flagellin synthesis FlgM |
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Gene: Desal_1020: negative regulator of flagellin synthesis FlgM |
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Desulfovibrio magneticus RS-1 Site: position = -61 score = 7.00518 sequence = TAATCATC-(12)-GCCGATAA Gene: DMR_31460: negative regulator of flagellin synthesis FlgM |
Gene: LI0633: negative regulator of flagellin synthesis FlgM |
Gene: Dbac_2373: negative regulator of flagellin synthesis FlgM |
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Desulfohalobium retbaense DSM 5692 Site: position = -114 score = 7.15251 sequence = TAAACCCC-(11)-GCCGATAC Gene: Dret_0600: negative regulator of flagellin synthesis FlgM |
negative regulator of flagellin synthesis FlgM |
| Dret_0601 |
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Gene: Dret_0601: hypothetical protein |
hypothetical protein |
| flgK |
Gene: DVU0519: flagellar hook-associated protein FlgK, putative |
2
Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1619: flagellar hook-associated protein FlgK, putative Gene: DvMF_2524: flagellar hook-associated protein FlgK, putative |
Gene: Dde_3152: flagellar hook-associated protein FlgK, putative |
Gene: Ddes_2001: flagellar hook-associated protein FlgK, putative |
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3
Desulfovibrio salexigens DSM 2638 Gene: Desal_0942: flagellar hook-associated protein FlgK, putative Gene: Desal_1016: flagellar hook-associated protein FlgK, putative Gene: Desal_0513: flagellar hook-associated protein FlgK, putative |
Gene: DMR_31500: flagellar hook-associated protein FlgK, putative |
Gene: LI0747: flagellar hook-associated protein FlgK, putative |
Gene: Dbac_2403: flagellar hook-associated protein FlgK, putative |
Gene: Dret_0602: flagellar hook-associated protein FlgK, putative |
flagellar hook-associated protein FlgK, putative |
| flgL |
Gene: DVU0520: flagellar hook-associated protein FlgL, putative |
2
Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1620: flagellar hook-associated protein FlgL, putative Gene: DvMF_2525: flagellar hook-associated protein FlgL, putative |
Gene: Dde_3151: flagellar hook-associated protein FlgL, putative |
Gene: Ddes_2000: flagellar hook-associated protein FlgL, putative |
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3
Desulfovibrio salexigens DSM 2638 Gene: Desal_0514: flagellar hook-associated protein FlgL, putative Gene: Desal_1017: flagellar hook-associated protein FlgL, putative Gene: Desal_0943: flagellar hook-associated protein FlgL, putative |
Gene: DMR_31490: flagellar hook-associated protein FlgL, putative |
Gene: LI0748: flagellar hook-associated protein FlgL, putative |
Gene: Dbac_2402: flagellar hook-associated protein FlgL, putative |
Gene: Dret_0603: flagellar hook-associated protein FlgL, putative |
flagellar hook-associated protein FlgL, putative |
| csrA |
Gene: DVU0521: carbon storage regulator, CsrA |
Gene: DvMF_2526: carbon storage regulator, CsrA |
Gene: Dde_3150: carbon storage regulator, CsrA |
Gene: Ddes_1999: carbon storage regulator, CsrA |
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Gene: Desal_1018: carbon storage regulator, CsrA |
Gene: DMR_31480: carbon storage regulator, CsrA |
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Gene: Dbac_2401: carbon storage regulator, CsrA |
Gene: Dret_0604: carbon storage regulator, CsrA |
carbon storage regulator, CsrA |
| yviF |
Gene: DVU0522: Flagellar assembly factor FliW |
Gene: DvMF_2527: Flagellar assembly factor FliW |
Gene: Dde_3149: Flagellar assembly factor FliW |
Gene: Ddes_1998: Flagellar assembly factor FliW |
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Gene: Desal_1019: Flagellar assembly factor FliW |
Gene: DMR_31470: Flagellar assembly factor FliW |
Gene: LI0749: Flagellar assembly factor FliW |
Gene: Dbac_2400: Flagellar assembly factor FliW |
Gene: Dret_0605: Flagellar assembly factor FliW |
Flagellar assembly factor FliW |
| DVU0524 |
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Desulfovibrio vulgaris Hildenborough Site: position = -48 score = 8.1407 sequence = TAAAGTTC-(11)-TCCGATAA Site: position = -138 score = 7.5257 sequence = TAAAGAAG-(11)-GCCGATGA Gene: DVU0524: hypothetical protein |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -49 score = 8.28015 sequence = TAAAGTTC-(12)-GCCGATAG Site: position = -152 score = 7.68479 sequence = TAATGTTT-(11)-GCCGATAG Gene: DvMF_2586: hypothetical protein |
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Desulfovibrio desulfuricans G20 Site: position = -49 score = 7.99209 sequence = TAAAGTTC-(11)-ACCGATAA Site: position = -118 score = 7.1536 sequence = TAATGTTT-(11)-GCCGTTAA Gene: Dde_0639: hypothetical protein |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -49 score = 6.9276 sequence = TAAAGTTT-(11)-TCCGAACA Gene: Ddes_2006: hypothetical protein |
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Desulfovibrio salexigens DSM 2638 Site: position = -52 score = 7.88323 sequence = TAAAGATT-(12)-ACCGATAA Gene: Desal_1021: hypothetical protein |
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Desulfovibrio magneticus RS-1 Site: position = -52 score = 7.80513 sequence = TAAAGGTT-(11)-TCCGATAA Gene: DMR_31450: hypothetical protein |
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Lawsonia intracellularis PHE/MN1-00 Site: position = -48 score = 7.53746 sequence = TAAAGTTT-(11)-ACCGATGG Gene: LI0634: hypothetical protein |
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Desulfomicrobium baculatum DSM 4028 Site: position = -49 score = 8.28015 sequence = TAAAGTTC-(11)-GCCGATAG Gene: Dbac_2372: hypothetical protein |
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hypothetical protein |
| Desal_0030 |
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Desulfovibrio salexigens DSM 2638 Site: position = -89 score = 6.6813 sequence = TAAATTTC-(11)-GACGATAG Gene: Desal_0030: Anti-sigma-28 factor FlgM family protein |
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Desulfovibrio magneticus RS-1 Site: position = -90 score = 8.11754 sequence = TAAAGACT-(12)-GCCGATAA Gene: DMR_33980: Anti-sigma-28 factor FlgM family protein |
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Anti-sigma-28 factor FlgM family protein |
| CRON 5. | |||||||||||
| flgF |
Gene: DVU0512: Flagellar basal-body rod protein FlgF |
Gene: DvMF_2517: Flagellar basal-body rod protein FlgF |
Gene: Dde_3159: Flagellar basal-body rod protein FlgF |
Gene: Ddes_0391: Flagellar basal-body rod protein FlgF |
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Gene: Desal_1008: Flagellar basal-body rod protein FlgF |
Gene: DMR_31570: Flagellar basal-body rod protein FlgF |
Gene: LI0740: Flagellar basal-body rod protein FlgF |
Gene: Dbac_2410: Flagellar basal-body rod protein FlgF |
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Desulfohalobium retbaense DSM 5692 Site: position = -108 score = 7.94302 sequence = TAAAGTTC-(11)-TCCGATAC Gene: Dret_0593: Flagellar basal-body rod protein FlgF |
Flagellar basal-body rod protein FlgF |
| flgG |
Gene: DVU0513: Flagellar basal-body rod protein FlgG |
Gene: DvMF_2518: Flagellar basal-body rod protein FlgG |
Gene: Dde_3158: Flagellar basal-body rod protein FlgG |
Gene: Ddes_0392: Flagellar basal-body rod protein FlgG |
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Gene: Desal_1009: Flagellar basal-body rod protein FlgG |
Gene: DMR_31560: Flagellar basal-body rod protein FlgG |
Gene: LI0741: Flagellar basal-body rod protein FlgG |
Gene: Dbac_2409: Flagellar basal-body rod protein FlgG |
Gene: Dret_0594: Flagellar basal-body rod protein FlgG |
Flagellar basal-body rod protein FlgG |
| flgA |
Gene: DVU0514: Flagellar basal-body P-ring formation protein FlgA |
Gene: DvMF_2519: Flagellar basal-body P-ring formation protein FlgA |
Gene: Dde_3157: Flagellar basal-body P-ring formation protein FlgA |
Gene: Ddes_0393: Flagellar basal-body P-ring formation protein FlgA |
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Gene: Desal_1010: Flagellar basal-body P-ring formation protein FlgA |
Gene: DMR_31550: Flagellar basal-body P-ring formation protein FlgA |
Gene: LI0742: Flagellar basal-body P-ring formation protein FlgA |
Gene: Dbac_2408: Flagellar basal-body P-ring formation protein FlgA |
Gene: Dret_0595: Flagellar basal-body P-ring formation protein FlgA |
Flagellar basal-body P-ring formation protein FlgA |
| flgH |
Gene: DVU0515: flagellar L-ring protein FlgH |
Gene: DvMF_2520: flagellar L-ring protein FlgH |
Gene: Dde_3156: flagellar L-ring protein FlgH |
Gene: Ddes_0394: flagellar L-ring protein FlgH |
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Gene: Desal_1011: flagellar L-ring protein FlgH |
Gene: DMR_31540: flagellar L-ring protein FlgH |
Gene: LI0743: flagellar L-ring protein FlgH |
Gene: Dbac_2407: flagellar L-ring protein FlgH |
Gene: Dret_0596: flagellar L-ring protein FlgH |
flagellar L-ring protein FlgH |
| flgI |
Gene: DVU0516: flagellar P-ring protein FlgI |
Gene: DvMF_2521: flagellar P-ring protein FlgI |
Gene: Dde_3155: flagellar P-ring protein FlgI |
Gene: Ddes_2004: flagellar P-ring protein FlgI |
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Gene: Desal_1012: flagellar P-ring protein FlgI |
Gene: DMR_31530: flagellar P-ring protein FlgI |
Gene: LI0744: flagellar P-ring protein FlgI |
Gene: Dbac_2406: flagellar P-ring protein FlgI |
Gene: Dret_0597: flagellar P-ring protein FlgI |
flagellar P-ring protein FlgI |
| flgJ |
Gene: DVU0517: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
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Gene: Dde_3154: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: Ddes_2003: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
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Gene: Desal_1014: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
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Gene: LI0745: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: Dbac_2405: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: Dret_0598: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
| CRON 6. | |||||||||||
| flaD |
*
Desulfovibrio vulgaris Hildenborough Site: position = -131 score = 8.02872 sequence = TAAAGTCC-(11)-GCCGATAC Gene: DVU2082: flagellin, putative |
*2
Desulfovibrio vulgaris str. Miyazaki F Site: position = -151 score = 7.43988 sequence = TAAAGCGT-(11)-GCCGATAC Gene: DvMF_0786: flagellin, putative Site: position = -112 score = 6.97396 sequence = TATAGTTT-(11)-GCCGAAAA Gene: DvMF_2950: flagellin, putative |
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Desulfovibrio desulfuricans G20 Site: position = -135 score = 7.7644 sequence = TAAAGTAA-(11)-GCCGATAG Gene: Dde_1570: flagellin, putative |
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flagellin, putative |
| CRON 7. | |||||||||||
| Dvul_0010 |
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Gene: DvMF_2100: hypothetical protein |
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Desulfovibrio salexigens DSM 2638 Site: position = -51 score = 6.82893 sequence = TAAACAAA-(11)-GCCGATAT Gene: Desal_0278: hypothetical protein |
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Desulfovibrio magneticus RS-1 Site: position = -60 score = 8.05649 sequence = TAAAGCCT-(11)-GCCGATAA Gene: DMR_35470: hypothetical protein |
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hypothetical protein |
| CRON 8. | |||||||||||
| DVU2948 |
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Desulfovibrio vulgaris Hildenborough Site: position = -63 score = 7.94302 sequence = TAAAGTTC-(11)-TCCGATAC Gene: DVU2948: flagellin domain protein |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -68 score = 8.12182 sequence = TAAAGCTT-(11)-GCCGATAC Gene: DvMF_1474: flagellin domain protein |
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flagellin domain protein |
| CRON 9. | |||||||||||
| DVU1857 |
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Desulfovibrio vulgaris Hildenborough Site: position = -145 score = 7.75899 sequence = TAAAGCAC-(11)-GCCGATAC Gene: DVU1857: methyl-accepting chemotaxis protein |
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methyl-accepting chemotaxis protein |
| CRON 10. | |||||||||||
| DVU1400 |
Gene: DVU1400: methyl-accepting chemotaxis protein |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -66 score = 7.21579 sequence = TAATGTTT-(11)-TCCGATAT Gene: DvMF_3073: methyl-accepting chemotaxis protein |
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Gene: Desal_0917: methyl-accepting chemotaxis protein |
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methyl-accepting chemotaxis protein |
| CRON 11. | |||||||||||
| DVU1339 |
*
Desulfovibrio vulgaris Hildenborough Site: position = -67 score = 7.19149 sequence = TCAAGCAT-(11)-GCCGATAG Gene: DVU1339: lipoprotein, putative |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -187 score = 7.48061 sequence = TCAAGCTT-(11)-GCCGATAG Gene: DvMF_0115: lipoprotein, putative |
Gene: Dde_2212: lipoprotein, putative |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -55 score = 7.60481 sequence = TGAAGTTT-(11)-GCCGATAA Gene: Ddes_0949: lipoprotein, putative |
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Gene: LI0208: lipoprotein, putative |
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lipoprotein, putative |
| DvMF_0114 |
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Gene: DvMF_0114: hypothetical protein |
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Gene: Ddes_0948: hypothetical protein |
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hypothetical protein |
| DVU1338 |
Gene: DVU1338: Peptidoglycan-binding domain 1 protein |
Gene: DvMF_0113: Peptidoglycan-binding domain 1 protein |
Gene: Dde_2213: Peptidoglycan-binding domain 1 protein |
Gene: Ddes_0947: Peptidoglycan-binding domain 1 protein |
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Gene: DMR_17590: Peptidoglycan-binding domain 1 protein |
Gene: LI0209: Peptidoglycan-binding domain 1 protein |
Gene: Dbac_3399: Peptidoglycan-binding domain 1 protein |
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Peptidoglycan-binding domain 1 protein |
| DVU0993 |
Gene: DVU0993: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -81 score = 7.41096 sequence = TAAAGCAA-(11)-GCCGATGA Gene: DvMF_0893: hypothetical protein |
*
Desulfovibrio desulfuricans G20 Site: position = -89 score = 7.16525 sequence = TAAAGTAA-(12)-GCCGAAAC Gene: Dde_2399: hypothetical protein |
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*
Desulfomicrobium baculatum DSM 4028 Site: position = -64 score = 7.40713 sequence = TTAAGTTT-(11)-GCCGATAC Gene: Dbac_3400: hypothetical protein |
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hypothetical protein |
| DMR_17600 |
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*
Desulfovibrio magneticus RS-1 Site: position = -63 score = 7.85221 sequence = TAAAGATT-(11)-GCCGATGG Gene: DMR_17600: hypothetical protein |
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hypothetical protein |
| DVU1073 |
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Desulfovibrio vulgaris Hildenborough Site: position = -77 score = 8.07632 sequence = TAAAGTAT-(11)-GCCGATAC Gene: DVU1073: conserved domain protein |
Gene: DvMF_0892: conserved domain protein |
Gene: Dde_2398: conserved domain protein |
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Gene: Dbac_3401: conserved domain protein |
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conserved domain protein |
| CRON 12. | |||||||||||
| DVU0976 |
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Desulfovibrio vulgaris Hildenborough Site: position = -62 score = 7.09429 sequence = TCAAGTCG-(11)-GCCGATAT Gene: DVU0976: response regulator receiver protein |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -67 score = 8.24405 sequence = TAAAGTTT-(11)-GCCGATGA Gene: DvMF_1334: response regulator receiver protein |
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Desulfovibrio desulfuricans G20 Site: position = -90 score = 7.48029 sequence = TAAAGCCG-(11)-GCCGATAT Gene: Dde_2384: response regulator receiver protein |
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response regulator receiver protein |
| CRON 13. | |||||||||||
| Dde_3018 |
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Desulfovibrio desulfuricans G20 Site: position = -188 score = 7.48764 sequence = TAAAGACA-(11)-GCCGATAT Gene: Dde_3018: flagellin N-terminal domain-containing protein |
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Desulfovibrio magneticus RS-1 Site: position = -63 score = 8.17034 sequence = TAAAGTTC-(12)-GCCGATGA Gene: DMR_31110: flagellin N-terminal domain-containing protein |
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Desulfomicrobium baculatum DSM 4028 Site: position = -90 score = 6.5325 sequence = TAATGACT-(11)-GCCGATTT Gene: Dbac_2252: flagellin N-terminal domain-containing protein |
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flagellin N-terminal domain-containing protein |
| CRON 14. | |||||||||||
| Dvul_2011 |
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*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -83 score = 7.96108 sequence = TAAAGTTC-(11)-GCCGATGG Gene: DvMF_1333: conserved hypothetical protein |
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Desulfovibrio desulfuricans G20 Site: position = -84 score = 6.99541 sequence = TAAAGAAA-(11)-GCCGATTG Gene: Dde_2382: conserved hypothetical protein |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -50 score = 7.76153 sequence = TAAAGCTT-(11)-TCCGATAG Gene: Ddes_1275: conserved hypothetical protein |
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Desulfovibrio salexigens DSM 2638 Site: position = -74 score = 6.68839 sequence = TAAAGGAA-(11)-GTCGATAC Gene: Desal_2002: conserved hypothetical protein |
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Lawsonia intracellularis PHE/MN1-00 Site: position = -65 score = 7.10242 sequence = TAAAGTTT-(11)-CACGATAA Gene: LI0096: conserved hypothetical protein |
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conserved hypothetical protein |
| Ddes_1276 |
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Gene: Ddes_1276: response regulator receiver protein |
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Gene: LI0095: response regulator receiver protein |
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response regulator receiver protein |
| CRON 15. | |||||||||||
| cheA-3 |
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Desulfovibrio vulgaris Hildenborough Site: position = -115 score = 8.1339 sequence = TAAAGATG-(11)-GCCGATAA Gene: DVU2072: chemotaxis protein CheA |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -179 score = 7.4389 sequence = TAAAGATG-(11)-ACCGATAC Gene: DvMF_0774: chemotaxis protein CheA |
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Desulfovibrio desulfuricans G20 Site: position = -105 score = 7.64342 sequence = TAAAGCTT-(12)-GCCGATCA Gene: Dde_1577: chemotaxis protein CheA |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -84 score = 8.1339 sequence = TAAAGATG-(11)-GCCGATAA Gene: Ddes_1383: chemotaxis protein CheA |
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Gene: Desal_2724: chemotaxis protein CheA |
Gene: DMR_33420: chemotaxis protein CheA |
Gene: LI1144: chemotaxis protein CheA |
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chemotaxis protein CheA |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |