Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU2106 regulog to Desulfovibrio desulfuricans G20

Reference regulog properties
Source regulog: DVU2106 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans G20
Orthologous TF(s) Dde_3196
Regulated genes 1
Built upon 9 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans G20
Locus tag Position Score Sequence
Position: -150
Score: 5.6
Sequence: GGGCGTATTATACGCCA
Position: -128
Score: 5.5
Sequence: GGGCGCGTTTCACGCCC
Locus tag: Dde_3197
Dde_3197 -150 5.6 GGGCGTATTATACGCCA
-128 5.5 GGGCGCGTTTCACGCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dret_0446
Ortholog function: hypothetical protein
Desulfohalobium retbaense DSM 5692 Dret_0446 -146 5.1 AGACAAATAATTCGCCC
Desulfovibrio desulfuricans G20 Dde_3197 -150 5.6 GGGCGTATTATACGCCA
-128 5.5 GGGCGCGTTTCACGCCC
Desulfovibrio magneticus RS-1 DMR_11290 -130 5.6 GGGCTAATTATTCGCCC
Desulfovibrio salexigens DSM 2638 Desal_0622 -141 5.4 GGACGCATAATTAGCCC
Desulfovibrio vulgaris Hildenborough null -160 5.7 GGGCGTGTTTTGCGCCC
-129 5.8 AGGCGCATTTTACGCCC