Regulog DVU2106 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen fixation
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Nitrogen fixation

Statistics of regulated genes
Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692	2	1
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20	6	1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1	7	1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638	7	2
Desulfovibrio vulgaris Hildenborough	6	2
Desulfovibrio vulgaris str. Miyazaki F
Lawsonia intracellularis PHE/MN1-00

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
Dret_0446	* Desulfohalobium retbaense DSM 5692 Site: position = -146 score = 5.05716 sequence = AGACAAATAATTCGCCC Gene: Dret_0446: hypothetical protein	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2301: hypothetical protein	* Desulfovibrio desulfuricans G20 Site: position = -128 score = 5.45713 sequence = GGGCGCGTTTCACGCCC Site: position = -150 score = 5.58978 sequence = GGGCGTATTATACGCCA Gene: Dde_3197: hypothetical protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	* Desulfovibrio magneticus RS-1 Site: position = -130 score = 5.62671 sequence = GGGCTAATTATTCGCCC Gene: DMR_11290: hypothetical protein	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -141 score = 5.37412 sequence = GGACGCATAATTAGCCC Gene: Desal_0622: hypothetical protein	* Desulfovibrio vulgaris Hildenborough Site: position = -160 score = 5.69326 sequence = GGGCGTGTTTTGCGCCC Site: position = -129 score = 5.81415 sequence = AGGCGCATTTTACGCCC Gene: null: hypothetical protein	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
mrp	Desulfohalobium retbaense DSM 5692 Gene: Dret_0440: Mrp protein (mrp)	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20 Gene: Dde_3202: Mrp protein (mrp)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_11280: Mrp protein (mrp)	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_0620: Mrp protein (mrp)	Desulfovibrio vulgaris Hildenborough Gene: DVU2109: Mrp protein (mrp)	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Mrp protein (mrp)
Dbac_0447	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0447: nitrogen-fixing NifU domain protein	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_11270: nitrogen-fixing NifU domain protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	nitrogen-fixing NifU domain protein
DVU2108	Desulfohalobium retbaense DSM 5692 Gene: Dret_0445: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2278: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfovibrio desulfuricans G20 Gene: Dde_3198: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1867: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfovibrio magneticus RS-1 Gene: DMR_11260: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00382: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_0621: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfovibrio vulgaris Hildenborough Gene: DVU2108: Dinitrogenase iron-molybdenum cofactor biosynthesis protein	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Dinitrogenase iron-molybdenum cofactor biosynthesis protein
DVU2104	Desulfohalobium retbaense DSM 5692 Gene: Dret_0442: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2277: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio desulfuricans G20 Gene: Dde_3200: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1866: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio magneticus RS-1 Gene: DMR_11250: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00383: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio salexigens DSM 2638 Gene: Desal_2514: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio vulgaris Hildenborough Gene: DVU2104: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
DVU2103	Desulfohalobium retbaense DSM 5692 Gene: Dret_0441: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2276: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio desulfuricans G20 Gene: Dde_3201: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1865: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio magneticus RS-1 Gene: DMR_11240: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00384: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio salexigens DSM 2638 Gene: Desal_2515: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio vulgaris Hildenborough Gene: DVU2103: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Dbac_2275	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2275: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1864: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein	Desulfovibrio magneticus RS-1 Gene: DMR_11230: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00385: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00 Gene: LI0481: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein	dinitrogenase iron-molybdenum cofactor biosynthesis domain protein
Dde_3199	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20 Gene: Dde_3199: hypothetical protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
Desal_2513	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -136 score = 5.61808 sequence = GGGCATATTTTTAGCCC Gene: Desal_2513: hypothetical protein	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
Dbac_1530	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1530: Protein of unknown function CGGC region	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_2516: Protein of unknown function CGGC region	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Protein of unknown function CGGC region
DVU2105	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	* Desulfovibrio vulgaris Hildenborough Site: position = -137 score = 5.97008 sequence = GGGCGCATTTTGCGCCC Gene: DVU2105: Major ampullate spidroin	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Major ampullate spidroin

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU2106 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --