Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PhoB regulog to Desulfovibrio desulfuricans G20

Reference regulog properties
Source regulog: PhoB - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans G20
Orthologous TF(s) Dde_2387
Regulated genes 9
Built upon 95 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans G20
Locus tag Position Score Sequence
Position: -190
Score: 3.9
Sequence: ATGTTACAAAAATGTCAT
Locus tag: Dde_0275
Dde_0275 -190 3.9 ATGTTACAAAAATGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0169
Ortholog function: oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein
Desulfovibrio desulfuricans G20 Dde_0275 -19 3.9 ATGTTACAAAAATGTCAT
Desulfohalobium retbaense DSM 5692 Dret_1361 -147 4.4 TTGTCACACGATTGTATA
Position: -113
Score: 4.4
Sequence: TCGTCACATTTTTGTGAT
Locus tag: Dde_1185
Dde_1185 -113 4.4 TCGTCACATTTTTGTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dppA
Ortholog function: putative oligopeptide ABC transporter binding protein
Desulfovibrio desulfuricans G20 Dde_1185 -113 4.4 TCGTCACATTTTTGTGAT
Position: -95
Score: 5.1
Sequence: CTGTCATTCTGTTGTCAC
Locus tag: Dde_1216
Dde_1216 -95 5.1 CTGTCATTCTGTTGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_1216
Ortholog function: Alkaline phosphatase (EC 3.1.3.1)
Desulfovibrio desulfuricans G20 Dde_1216 -95 5.1 CTGTCATTCTGTTGTCAC
Desulfovibrio salexigens DSM 2638 Desal_1742 -232 4.3 TTGTCACTAATTTGTATT
Desulfovibrio magneticus RS-1 DMR_08520 -65 4.2 ACGCCACGGGTTCGTCAC
Desulfohalobium retbaense DSM 5692 Dret_2292 -102 3.9 GCGCCATGCCTGTGTCAC
Position: -253
Score: 4.8
Sequence: CGGTCACACGGCTGTCAC
Locus tag: Dde_3324
Dde_3324 -253 4.8 CGGTCACACGGCTGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnC
Ortholog function: ATPase
Desulfovibrio desulfuricans G20 Dde_3324 -253 4.8 CGGTCACACGGCTGTCAC
Position: -202
Score: 5.2
Sequence: TTGTCACACGATTGTTAC
Locus tag: Dde_3781
Dde_3781 -202 5.2 TTGTCACACGATTGTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_3781
Ortholog function: Probable low-affinity inorganic phosphate transporter
Desulfovibrio desulfuricans G20 Dde_3781 -232 3.9 ATGTTATTTAACCGTCAC
-202 5.2 TTGTCACACGATTGTTAC
Desulfovibrio salexigens DSM 2638 Desal_0094 -198 5.2 TTGTAACTGTATTGTAAC
-68 4.4 TTGTTACTCCCCTGTGAC
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