Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PhnF regulog to Desulfovibrio desulfuricans G20

Reference regulog properties
Source regulog: PhnF - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Phosphonate utilization
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans G20
Orthologous TF(s) Dde_3327
Regulated genes 2
Built upon 5 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans G20
Locus tag Position Score Sequence
Position: -112
Score: 5.6
Sequence: GGTTGTCTAGATAACT
Locus tag: Dde_3327
Dde_3327 -112 5.6 GGTTGTCTAGATAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnF
Ortholog function: Transcriptional regulator for phosphonate utilization, GntR family
Desulfomicrobium baculatum DSM 4028 Dbac_0812 -79 5.2 ATTTGTATAGACATCT
Desulfovibrio desulfuricans G20 Dde_3327 -112 5.6 GGTTGTCTAGATAACT
Position: -40
Score: 5.7
Sequence: AGTTATCTAGACAACC
Locus tag: Dde_3328
Dde_3328 -40 5.7 AGTTATCTAGACAACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnG
Ortholog function: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Desulfomicrobium baculatum DSM 4028 Dbac_0813 -39 5.2 AGATGTCTATACAAAT
Desulfovibrio desulfuricans G20 Dde_3328 -40 5.7 AGTTATCTAGACAACC