Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HrsM regulog to Desulfovibrio desulfuricans G20

Reference regulog properties
Source regulog: HrsM - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans G20
Orthologous TF(s) Dde_2226
Regulated genes 1
Built upon 16 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans G20
Locus tag Position Score Sequence
Position: -84
Score: 5
Sequence: GATTGTATTTTTCTATC
Locus tag: Dde_2134
Dde_2134 -84 5 GATTGTATTTTTCTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hysB
Ortholog function: periplasmic [NiFeSe] hydrogenase, small subunit
Desulfomicrobium baculatum DSM 4028 Dbac_1970 -117 4.8 GATCGTGATTTTCGATC
Desulfovibrio desulfuricans G20 Dde_2134 -217 4.1 TATCAGAATTCTTGATA
-153 5 GATTGTATTTTTCTATC
Desulfovibrio salexigens DSM 2638 Desal_2050 -160 5.1 TATTTGTTTTATCTATA
Desulfovibrio vulgaris Hildenborough DVU1917 -147 4.3 CATCACCTTTTTCGATG
Desulfovibrio vulgaris str. Miyazaki F DvMF_0274 -152 4.8 AATCACTTTTTTCTATC