Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Roseiflexus castenholzii DSM 13941

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AcrR Multidrug efflux; Multidrug resistance 2 2
TF Cagg_3094 Creatinine utilization 2 2
TF Caur_3401 Multidrug resistance; Multidrug efflux 2 1
TF Caur_3448 Sugar utilization 1 2
TF Caur_3587 2 2
TF FetR Iron ion, (Fe2+) Iron homeostasis 3 3
TF HcpR Nitric oxide Nitrosative stress response 1 1
TF HrcA Heat shock Heat shock response 2 3
TF LexA DNA damage SOS response 14 11
TF MhpR Utilization of aromatic compounds 2 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 2 2
TF ModR Molybdate Molybdenum homeostasis 3 1
TF NagR N-acetylglucosamine N-acetylglucosamine utilization 3 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 5 5
TF Rcas_2304 Amino acid utilization 1 1
TF Rcas_3562 Alpha-galactosides utilization 1 1
TF Rex NADH Energy metabolism 17 12
TF RhaR Rhamnose Rhamnose utilization 1 3
TF SufR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 7 2
TF Zur2 Zinc ion, (Zn2+) Zinc homeostasis 5 5
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 3 2
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA Glycine Glycine Glycine metabolism 1 2
RNA L10_leader Ribosome biogenesis 1 1
RNA SAM S-adenosylmethionine Methionine biosynthesis 7 2
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Ser) Ser-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 1 1
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 4 3
RNA glmS Glucosamine-6-phosphate Amino sugar metabolism 1 1
RNA yybP-ykoY 1 1
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