Regulon of Cobalamin in Roseiflexus castenholzii DSM 13941
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Chloroflexia |
| Under regulation: | |
| - Genes | 23 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Chloroflexi
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -325
Score: 64.2 Sequence: CAAGTGAATACCATC...
Locus tag: Rcas_2247
Name: null Funciton: hypothetical protein
Locus tag: Rcas_2248
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Rcas_2249
Name: cbiW Funciton: ferredoxin-like protein
Locus tag: Rcas_2250
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Rcas_2251
Name: btuD Funciton: Vitamin B12 ABC transporter, ATP-binding component BtuD |
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hypothetical protein
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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cbiW
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ferredoxin-like protein
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btuC
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Vitamin B12 ABC transporter, permease component BtuC
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btuD
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Vitamin B12 ABC transporter, ATP-binding component BtuD
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Position: -424
Score: 61.3 Sequence: TCAATCCAACGACCG...
Locus tag: Rcas_0649
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Rcas_0648
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Rcas_0647
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Rcas_0646
Name: cbiO Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
Locus tag: Rcas_0645
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Rcas_0644
Name: cbiX Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Locus tag: Rcas_0643
Name: wrbA Funciton: multimeric flavodoxin WrbA-like protein
Locus tag: Rcas_0642
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Rcas_0641
Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: Rcas_0640
Name: cbiET Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Rcas_0639
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Rcas_0638
Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Rcas_0637
Name: cbiGH Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
Locus tag: Rcas_0636
Name: cobA Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Rcas_0635
Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase
Locus tag: Rcas_0634
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Rcas_0633
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Rcas_0632
Name: cbiP Funciton: Cobyric acid synthase |
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btuR
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Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
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cobN
|
CobN component of cobalt chelatase involved in B12 biosynthesis
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cobT
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Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
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cbiO
|
ATPase component CbiO of energizing module of cobalt ECF transporter
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cbiB
|
Adenosylcobinamide-phosphate synthase
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cbiX
|
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
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wrbA
|
multimeric flavodoxin WrbA-like protein
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cbiC
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Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
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cbiD
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Cobalt-precorrin-6 synthase, anaerobic
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cbiET
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Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
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cbiL
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Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiF
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Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
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cbiGH
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Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
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cobA
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Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
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cbiA
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Cobyrinic acid A,C-diamide synthase
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cobU
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Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
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cobD
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L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
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cbiP
|
Cobyric acid synthase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |