Regulon of TPP in Roseiflexus castenholzii DSM 13941
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Chloroflexia |
| Under regulation: | |
| - Genes | 10 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Chloroflexi
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -241
Score: 55.8 Sequence: CAGTGTTCCGTAGGG...
Locus tag: Rcas_1431
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: Rcas_1430
Name: null Funciton: hypothetical protein |
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tenA
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Thiaminase II (EC 3.5.99.2)
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hypothetical protein
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Position: -157
Score: 58.1 Sequence: AGGGGAGCCAGGTGA...
Locus tag: Rcas_0665
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: Rcas_0666
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Rcas_0667
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Rcas_0668
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component |
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COG0011
|
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
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thiX
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Hydroxymethylpyrimidine ABC transporter, transmembrane component
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thiY
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Hydroxymethylpyrimidine ABC transporter, substrate-binding component
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thiZ
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Hydroxymethylpyrimidine ABC transporter, ATPase component
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Position: -180
Score: 71.7 Sequence: GGCGCCACTGGGGGA...
Locus tag: Rcas_4121
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Rcas_4122
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Rcas_4123
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: Rcas_4124
Name: ecfAA Funciton: ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters |
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiW
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Substrate-specific component ThiW of predicted thiazole ECF transporter
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ecfAA
|
ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |