Regulon of TPP in Roseiflexus castenholzii DSM 13941

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Chloroflexia
Under regulation:
- Genes	10
- Operons	3

Member of regulog collections

By taxonomy - Chloroflexi
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -241 Score: 55.8 Sequence: CAGTGTTCCGTAGGG... Locus tag: Rcas_1431 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: Rcas_1430 Name: null Funciton: hypothetical protein
	Rcas_1431	tenA	Thiaminase II (EC 3.5.99.2)
	Rcas_1430		hypothetical protein
Position: -157 Score: 58.1 Sequence: AGGGGAGCCAGGTGA... Locus tag: Rcas_0665 Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family Locus tag: Rcas_0666 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: Rcas_0667 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: Rcas_0668 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
	Rcas_0665	COG0011	Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
	Rcas_0666	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	Rcas_0667	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	Rcas_0668	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
Position: -180 Score: 71.7 Sequence: GGCGCCACTGGGGGA... Locus tag: Rcas_4121 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: Rcas_4122 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: Rcas_4123 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter Locus tag: Rcas_4124 Name: ecfAA Funciton: ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
	Rcas_4121	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Rcas_4122	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	Rcas_4123	thiW	Substrate-specific component ThiW of predicted thiazole ECF transporter
	Rcas_4124	ecfAA	ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD