Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Burkholderia vietnamiensis G4

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF BPSL1086 Metabolite transport 2 2
TF BPSL1304 Sugar utilization 1 1
TF BPSS0970 1 1
TF BPSS1200 1 1
TF Bamb_3558 1 1
TF Bamb_4155 Sugar utilization 1 1
TF Bamb_4265 1 1
TF Bcep1808_4966 1 1
TF Bcep18194_B0628 1 1
TF Bphy_4590 Sugar utilization 2 2
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 1 1
TF CueR Copper ion, (Cu+) Copper resistance 8 4
TF EutR Ectoine utilization 2 2
TF EutR 2 3
TF FadP Fatty acid degradation 14 8
TF FdsR Formate Formate oxydation 2 4
TF GabR Gamma-aminobutyric acid Gamma-aminobutyrate utilization 2 2
TF GguR Glucarate utilization; Galactarate utilization 11 12
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 5
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 5 5
TF HypR Proline Proline and 4-hydrohyproline utilization 2 2
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 2
TF LexA DNA damage SOS response 13 13
TF LiuQ Branched-chain amino acid degradation 2 4
TF LldR L-lactate Lactate utilization 2 2
TF MetR Homocysteine Methionine biosynthesis 2 2
TF ModE Molybdate Molybdenum homeostasis 3 1
TF ModE2 Molybdate Molybdopterin biosynthesis 6 4
TF NagQ N-acetylglucosamine N-acetylglucosamine utilization 1 1
TF NmlR Diamide Carbonyl stress response 1 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NsrR Nitric oxide Nitrosative stress response 5 3
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 4
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 4 4
TF PdxW Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF PsrA Oleate Fatty acid degradation 3 2
TF PtxS 2-keto-D-gluconate 2-ketogluconate utilization 3 2
TF RbsR Ribose Ribose utilization 1 1
TF RutR Uracil Pyrimidine utilization 2 2
TF ScrR Sucrose Sucrose utilization 2 4
TF SdhR Tricarboxylic acid cycle 7 5
TF UdhR Glucuronate utilization; Galacturonate utilization 3 4
TF UraR Uracil Pyrimidine utilization 1 2
TF UreR 2 4
TF YdcR 2 2
TF YrdX 2 2
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 3
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 6 5
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA Glycine Glycine Glycine metabolism 2 3
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
RNA mini-ykkC Multidrug resistance 2 1
RNA sucA Tricarboxylic acid cycle 1 1
RNA ykkC-yxkD Multidrug resistance 2 2
RNA yybP-ykoY 2 2
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