Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GguR in Burkholderia vietnamiensis G4

Properties
Regulator type: Transcription factor
TF locus tag: Bcep1808_1082
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucarate utilization; Galactarate utilization
Effector:
Regulog: GguR - Burkholderia
Statistics of regulated genes:
- Genes 12
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 67 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -70
Score: 4.6
Sequence: ATGTGATACGACGACGT
Locus tag: Bcep1808_3851
Name: pgl
Funciton: Polygalacturonase (EC 3.2.1.15)
pgl
Polygalacturonase (EC 3.2.1.15)

Position: -241
Score: 5.2
Sequence: ACGTCGTCGTATGACAT
Locus tag: Bcep1808_3562
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
kgsD
Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)

Position: -107
Score: 5.2
Sequence: CAGTCGTCGGATGACTT
Locus tag: Bcep1808_1082
Name: gguR
Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family
gguR
Predicted D-glucarate or D-galactorate utilization regulator, GntR family

Position: -155
Score: 4.8
Sequence: ATGTCATCGTACAACGC
Position: -49
Score: 4.9
Sequence: ATGTCGTATGATGACTA
Locus tag: Bcep1808_3560
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD
D-galactarate dehydratase (EC 4.2.1.42)

Position: -303
Score: 4.8
Sequence: ATGTTATACGATGACAC
Locus tag: Bcep1808_4374
Name: mcp
Funciton: methyl-accepting chemotaxis sensory transducer
mcp
methyl-accepting chemotaxis sensory transducer

Position: -329
Score: 4.9
Sequence: CAGTCATCGGACAACTA
Locus tag: Bcep1808_6572
Name: uxuP
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Bcep1808_6571
Name: uxuQ
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Bcep1808_6570
Name: uxuM
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
uxuP
Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
uxuQ
Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
uxuM
Predicted glucuronate /galacturonate TRAP-type transporter, large permease component

Position: -333
Score: 5.2
Sequence: AAGTCATCCGACGACTG
Locus tag: Bcep1808_1081
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
gudD
Glucarate dehydratase (EC 4.2.1.40)

Position: -198
Score: 4.9
Sequence: TAGTCATCATACGACAT
Position: -92
Score: 4.8
Sequence: GCGTTGTACGATGACAT
Locus tag: Bcep1808_3561
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
kdgD
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)

Position: -26
Score: 5.2
Sequence: ATGTCATACGACGACGT
Locus tag: Bcep1808_3563
Name: gudP
Funciton: D-glucarate permease
gudP
D-glucarate permease

Position: -239
Score: 5.3
Sequence: ATGTCATACGACGACAT
Locus tag: Bcep1808_2255
Name: uxuF
Funciton: Predicted uronate lactonase, PF10282 family
uxuF
Predicted uronate lactonase, PF10282 family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD