Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Burkholderia vietnamiensis G4

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Burkholderia
Under regulation:
- Genes 19
- Operons 5
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -296
Score: 86.9
Sequence: CTACGGCCGTTCGTT...
Locus tag: Bcep1808_1610
Name: cobG
Funciton: Cobalamin biosynthesis protein CobG
Locus tag: Bcep1808_1609
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Bcep1808_1608
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Bcep1808_1607
Name: cbiGH
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
cobG
Cobalamin biosynthesis protein CobG
cbiC
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiGH
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase

Position: -449
Score: 39.2
Sequence: ACACTCGCACGCGTT...
Locus tag: Bcep1808_1600
Name: hoxN
Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: Bcep1808_1601
Name: cobW
Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: Bcep1808_1602
Name: cobN
Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bcep1808_1603
Name: chlI
Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bcep1808_1604
Name: chlD
Funciton: ChlD component of cobalt chelatase involved in B12 biosynthesis
hoxN
HoxN/HupN/NixA family cobalt transporter
cobW
CobW GTPase involved in cobalt insertion for B12 biosynthesis
cobN
CobN component of cobalt chelatase involved in B12 biosynthesis
chlI
ChlI component of cobalt chelatase involved in B12 biosynthesis
chlD
ChlD component of cobalt chelatase involved in B12 biosynthesis

Position: -736
Score: 29.8
Sequence: CCTAAACTGGCGCGG...
Locus tag: Bcep1808_2539
Name: btuC
Funciton: ABC-type cobalamin transport system, permease component
Locus tag: Bcep1808_2538
Name: btuD
Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: Bcep1808_2537
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Bcep1808_2536
Name: cobS
Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: Bcep1808_2535
Name: cobC
Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
btuC
ABC-type cobalamin transport system, permease component
btuD
ABC-type cobalamin transport system, ATPase components
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
cobS
Cobalamin-5-phosphate synthase CobS
cobC
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)

Position: -402
Score: 107.9
Sequence: TACGCTTGCGCACCG...
Locus tag: Bcep1808_5001
Name: btuB1
Funciton: Outer membrane vitamin B12 receptor BtuB
btuB1
Outer membrane vitamin B12 receptor BtuB

Position: -399
Score: 37.6
Sequence: TATCGTATGCGCCGC...
Locus tag: Bcep1808_1599
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Bcep1808_1598
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Bcep1808_1597
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Bcep1808_1596
Name: cbiA
Funciton: Cobyrinic acid A,C-diamide synthase
cysG
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
cbiG
Cobalamin biosynthesis protein CbiG
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
cbiA
Cobyrinic acid A,C-diamide synthase
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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