Regulon of RutR in Burkholderia vietnamiensis G4
| Regulator type: | Transcription factor |
| TF locus tag: | Bcep1808_5508 |
| Regulator family: | TetR |
| Regulation mode: | repressor (activator) |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Regulog: | RutR - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - RutR
- By taxonomy - Burkholderia
- By TF family - TetR
- By effector - Uracil
- By pathway - Pyrimidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -186
Score: 6.8 Sequence: ACCTGTCCAATCGGACAGGA
Locus tag: Bcep1808_5509
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Bcep1808_5510
Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: Bcep1808_5511
Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
Locus tag: Bcep1808_5512
Name: pydP Funciton: Pyrimidine permease in reductive pathway
Locus tag: Bcep1808_5513
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
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pydC
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Beta-ureidopropionase (EC 3.5.1.6)
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pydX
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Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
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pydA
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Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
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pydP
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Pyrimidine permease in reductive pathway
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pydB
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Dihydropyrimidinase (EC 3.5.2.2)
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Position: -195
Score: 7 Sequence: TCCTGTCCGATTGGACAGGT
Locus tag: Bcep1808_5508
Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family |
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rutR
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Transcriptional regulator RutR of pyrimidine catabolism, TetR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |