Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadP in Burkholderia vietnamiensis G4

Properties
Regulator type: Transcription factor
TF locus tag: Bcep1808_2828
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Regulog: FadP - Burkholderia
Statistics of regulated genes:
- Genes 19
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 63 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -104
Score: 5.7
Sequence: TAGAACGATCGTGCTA
Locus tag: Bcep1808_1426
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)

Position: -61
Score: 5.2
Sequence: TGGCACGATCGTTCGC
Locus tag: Bcep1808_2651
Name: fadD2
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD2
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Position: -39
Score: 5.3
Sequence: TAGCACGACCATTCGA
Locus tag: Bcep1808_0523
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Position: -52
Score: 5.3
Sequence: TAGTACGGCCGTTCGA
Locus tag: Bcep1808_2828
Name: fadP
Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: Bcep1808_2827
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Bcep1808_2826
Name: acdB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Bcep1808_2825
Name: acdA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Bcep1808_2824
Name: echH
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
fadP
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
acdB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
acdA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
echH
Enoyl-CoA hydratase (EC 4.2.1.17)

Position: -116
Score: 5.4
Sequence: TTGAACGACCGTTCTT
Locus tag: Bcep1808_1838
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Bcep1808_1837
Name: pncA
Funciton: Nicotinamidase (EC 3.5.1.19)
Locus tag: Bcep1808_1836
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
pncA
Nicotinamidase (EC 3.5.1.19)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Position: -131
Score: 5.5
Sequence: TCGCACGATCGTTCGT
Locus tag: Bcep1808_3054
Name: nppD
Funciton: 2-nitropropane dioxygenase NPD
nppD
2-nitropropane dioxygenase NPD

Position: -140
Score: 5.6
Sequence: TAGAACGATCGTTCGC
Locus tag: Bcep1808_0983
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Bcep1808_0984
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
etfB
Electron transfer flavoprotein, beta subunit
etfA
Electron transfer flavoprotein, alpha subunit

Position: -60
Score: 5.4
Sequence: TAGCACGGTCGTTCAA
Locus tag: Bcep1808_2318
Name: null
Funciton: Conserved hypothetical protein DUF1178
Locus tag: Bcep1808_2317
Name: acdQ
Funciton: Acyl-CoA dehydrogenase domain protein
Locus tag: Bcep1808_2316
Name: acdP
Funciton: acyl-CoA dehydrogenase domain-containing protein
Locus tag: Bcep1808_2315
Name: maoC
Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like
Locus tag: Bcep1808_2314
Name: echI
Funciton: MaoC domain protein dehydratase
Conserved hypothetical protein DUF1178
acdQ
Acyl-CoA dehydrogenase domain protein
acdP
acyl-CoA dehydrogenase domain-containing protein
maoC
Putative (R)-specific enoyl-CoA hydratase, MaoC- like
echI
MaoC domain protein dehydratase
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