Regulon of FadP in Burkholderia vietnamiensis G4
| Regulator type: | Transcription factor |
| TF locus tag: | Bcep1808_2828 |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Fatty acid degradation |
| Effector: | |
| Regulog: | FadP - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 19 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FadP
- By taxonomy - Burkholderia
- By TF family - TetR
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -104
Score: 5.7 Sequence: TAGAACGATCGTGCTA
Locus tag: Bcep1808_1426
Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
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etfD
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Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
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Position: -61
Score: 5.2 Sequence: TGGCACGATCGTTCGC
Locus tag: Bcep1808_2651
Name: fadD2 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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fadD2
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -39
Score: 5.3 Sequence: TAGCACGACCATTCGA
Locus tag: Bcep1808_0523
Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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fadD1
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -52
Score: 5.3 Sequence: TAGTACGGCCGTTCGA
Locus tag: Bcep1808_2828
Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: Bcep1808_2827
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Bcep1808_2826
Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Bcep1808_2825
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Bcep1808_2824
Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
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fadP
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Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
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acdH
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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acdB
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Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
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acdA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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echH
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Enoyl-CoA hydratase (EC 4.2.1.17)
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Position: -116
Score: 5.4 Sequence: TTGAACGACCGTTCTT
Locus tag: Bcep1808_1838
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Bcep1808_1837
Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19)
Locus tag: Bcep1808_1836
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) |
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
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pncA
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Nicotinamidase (EC 3.5.1.19)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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Position: -131
Score: 5.5 Sequence: TCGCACGATCGTTCGT
Locus tag: Bcep1808_3054
Name: nppD Funciton: 2-nitropropane dioxygenase NPD |
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nppD
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2-nitropropane dioxygenase NPD
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Position: -140
Score: 5.6 Sequence: TAGAACGATCGTTCGC
Locus tag: Bcep1808_0983
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Bcep1808_0984
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -60
Score: 5.4 Sequence: TAGCACGGTCGTTCAA
Locus tag: Bcep1808_2318
Name: null Funciton: Conserved hypothetical protein DUF1178
Locus tag: Bcep1808_2317
Name: acdQ Funciton: Acyl-CoA dehydrogenase domain protein
Locus tag: Bcep1808_2316
Name: acdP Funciton: acyl-CoA dehydrogenase domain-containing protein
Locus tag: Bcep1808_2315
Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like
Locus tag: Bcep1808_2314
Name: echI Funciton: MaoC domain protein dehydratase |
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Conserved hypothetical protein DUF1178
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acdQ
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Acyl-CoA dehydrogenase domain protein
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acdP
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acyl-CoA dehydrogenase domain-containing protein
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maoC
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Putative (R)-specific enoyl-CoA hydratase, MaoC- like
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echI
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MaoC domain protein dehydratase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |