Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdhR in Burkholderia vietnamiensis G4

Properties
Regulator type: Transcription factor
TF locus tag: Bcep1808_4409
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR - Burkholderia
Statistics of regulated genes:
- Genes 12
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 34 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -135
Score: 5.9
Sequence: TCTTATGTCTTATATAAGAGTTGGCC
Locus tag: Bcep1808_4997
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceA
Isocitrate lyase (EC 4.1.3.1)

Position: -149
Score: 6.1
Sequence: AACCAACTCTTATATAAGACATAAGA
Locus tag: Bcep1808_5672
Name: acnB
Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
acnB
Aconitate hydratase 2 (EC 4.2.1.3)

Position: -69
Score: 7.4
Sequence: TCATATGTCTTATATAAGACAGATGT
Locus tag: Bcep1808_4409
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bcep1808_4410
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bcep1808_4411
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bcep1808_4412
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bcep1808_4413
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bcep1808_4414
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bcep1808_4415
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR
Transcriptional regulator of TCA cycle, GntR family
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
COG2938
succinate dehydrogenase iron-sulfur subunit
gltA
Citrate synthase (si) (EC 2.3.3.1)

Position: -246
Score: 7.4
Sequence: ACATCTGTCTTATATAAGACATATGA
Locus tag: Bcep1808_4408
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Bcep1808_4407
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
mdh
Malate dehydrogenase (EC 1.1.1.37)
citE
Citrate lyase beta chain (EC 4.1.3.6)

Position: -184
Score: 6.8
Sequence: TCCTCTGTCTTATATAAGACATAAGG
Locus tag: Bcep1808_2602
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD