Regulon of SdhR in Burkholderia vietnamiensis G4

Properties
Regulator type:	Transcription factor
TF locus tag:	Bcep1808_4409
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Burkholderia
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 34 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -135 Score: 5.9 Sequence: TCTTATGTCTTATATAAGAGTTGGCC Locus tag: Bcep1808_4997 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Bcep1808_4997	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -149 Score: 6.1 Sequence: AACCAACTCTTATATAAGACATAAGA Locus tag: Bcep1808_5672 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
	Bcep1808_5672	acnB	Aconitate hydratase 2 (EC 4.2.1.3)
Position: -69 Score: 7.4 Sequence: TCATATGTCTTATATAAGACAGATGT Locus tag: Bcep1808_4409 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Bcep1808_4410 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Bcep1808_4411 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: Bcep1808_4412 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Bcep1808_4413 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Bcep1808_4414 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Bcep1808_4415 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Bcep1808_4409	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Bcep1808_4410	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Bcep1808_4411	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	Bcep1808_4412	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Bcep1808_4413	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Bcep1808_4414	COG2938	succinate dehydrogenase iron-sulfur subunit
	Bcep1808_4415	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -246 Score: 7.4 Sequence: ACATCTGTCTTATATAAGACATATGA Locus tag: Bcep1808_4408 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: Bcep1808_4407 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
	Bcep1808_4408	mdh	Malate dehydrogenase (EC 1.1.1.37)
	Bcep1808_4407	citE	Citrate lyase beta chain (EC 4.1.3.6)
Position: -184 Score: 6.8 Sequence: TCCTCTGTCTTATATAAGACATAAGG Locus tag: Bcep1808_2602 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	Bcep1808_2602	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD