Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Burkholderia vietnamiensis G4

Properties
Regulator type: Transcription factor
TF locus tag: Bcep1808_1552
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Burkholderia
Statistics of regulated genes:
- Genes 21
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 75 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -34
Score: 6.4
Sequence: TACTGTATAAATGTACAGTA
Locus tag: Bcep1808_0987
Name: PF04055
Funciton: DNA repair photolyase
PF04055
DNA repair photolyase

Position: -89
Score: 6.2
Sequence: TACTGTATGTTTGTACAGTA
Locus tag: Bcep1808_3790
Name: PF10616
Funciton: Protein of unknown function DUF2471
Locus tag: Bcep1808_3791
Name: PF00589
Funciton: Predicted integrase/recombinase
PF10616
Protein of unknown function DUF2471
PF00589
Predicted integrase/recombinase

Position: -108
Score: 6.1
Sequence: AACTGTATGAATGTACAGTA
Locus tag: Bcep1808_6497
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -45
Score: 5.9
Sequence: TACTGTATAAAAATACAGCT
Position: -25
Score: 5.8
Sequence: CACTGTCTATCCATACAGTT
Locus tag: Bcep1808_1552
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -93
Score: 6
Sequence: CACTGTTTTTTTATACAGTG
Locus tag: Bcep1808_2763
Name: recA
Funciton: Recombinase A
Locus tag: Bcep1808_2762
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -140
Score: 5
Sequence: AGCTGTATAACCAACCAGTA
Locus tag: Bcep1808_4711
Name: BPSS1334
Funciton: Conserved hypothetical protein
BPSS1334
Conserved hypothetical protein

Position: -32
Score: 6.1
Sequence: TACTGTATATCCATACAGTT
Locus tag: Bcep1808_2932
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Bcep1808_2931
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Bcep1808_2930
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -28
Score: 5.9
Sequence: CACTGTGTTTTTGTACAGTA
Locus tag: Bcep1808_2222
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinB
DNA polymerase IV (EC 2.7.7.7)

Position: -36
Score: 5.7
Sequence: TACTGTATATCCATACAGCT
Locus tag: Bcep1808_6888
Name: imuA
Funciton: Predicted RecA/RadA recombinase
imuA
Predicted RecA/RadA recombinase

Position: -30
Score: 5.4
Sequence: ACCTGTACAAACGTACAGTG
Locus tag: Bcep1808_4916
Name: PF08774
Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: Bcep1808_4917
Name: PF06733
Funciton: DinG family ATP-dependent helicase CPE1197
PF08774
Hypothetical protein, restriction endonuclease-like VRR-NUC domain
PF06733
DinG family ATP-dependent helicase CPE1197

Position: -34
Score: 5.7
Sequence: TACTGTATATCCATACAGCT
Locus tag: Bcep1808_2009
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Bcep1808_2008
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Bcep1808_2007
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -39
Score: 5.9
Sequence: ACCTGTATATTTATACAGTG
Locus tag: Bcep1808_7144
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Bcep1808_7143
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Bcep1808_7142
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD