# TF - NsrR: Bcep1808_1775 6816327 Bcep1808_5223 hcp 6816326 Bcep1808_5222 hcr 6813971 Bcep1808_6181 nsrR2 6813972 Bcep1808_6182 nnrS 6813973 Bcep1808_6183 PF01814 6813974 Bcep1808_6184 PF10006 6817279 Bcep1808_0698 hmp # TF - HexR: Bcep1808_0627 6817207 Bcep1808_0627 hexR 6817466 Bcep1808_0883 zwf 6817465 Bcep1808_0882 pgl 6817464 Bcep1808_0881 glk 6817208 Bcep1808_0628 edd 6817209 Bcep1808_0629 eda # TF - NrdR: Bcep1808_0739 6817150 Bcep1808_0570 nrdA 6817151 Bcep1808_0571 nrdB # TF - Zur: Bcep1808_2713 6819343 Bcep1808_2713 zur 6819344 Bcep1808_2714 znuA 6819345 Bcep1808_2715 znuC 6819346 Bcep1808_2716 znuB 6816096 Bcep1808_4992 omr # TF - LldR: Bcep1808_2855 6819486 Bcep1808_2855 lldR 6819487 Bcep1808_2856 lldE 6819488 Bcep1808_2857 lldG 6819489 Bcep1808_2858 lldF 6819490 Bcep1808_2859 lldP # TF - HutC: Bcep1808_5574, Bcep1808_3731, Bcep1808_4120, Bcep1808_2246 6817802 Bcep1808_1206 COG1457 (CodB) 6813359 Bcep1808_5569 hisJ2 6813360 Bcep1808_5570 hisQ2 6813361 Bcep1808_5571 hisM2 6813362 Bcep1808_5572 hisP2 6813363 Bcep1808_5573 hutH2 6813364 Bcep1808_5574 hutC 6818867 Bcep1808_2247 hutH 6818866 Bcep1808_2246 hutC 6818865 Bcep1808_2245 hutU 6818864 Bcep1808_2244 hutD 6818863 Bcep1808_2243 hutI 6818862 Bcep1808_2242 hutF 6818861 Bcep1808_2241 hutG # TF - HypR: Bcep1808_6574 6814366 Bcep1808_6576 hypD 6814364 Bcep1808_6574 hypR # TF - IscR: Bcep1808_2206 6818823 Bcep1808_2206 iscR 6818822 Bcep1808_2205 iscS 6818821 Bcep1808_2204 iscU 6818820 Bcep1808_2203 iscA 6818819 Bcep1808_2202 hscB 6818818 Bcep1808_2201 hscA 6818817 Bcep1808_2200 fdx 6818816 Bcep1808_2199 yfhJ # TF - NagQ: Bcep1808_2929 6819561 Bcep1808_2929 nagQ 6819560 Bcep1808_2928 nagA 6819559 Bcep1808_2927 nagB2 6819558 Bcep1808_2926 ptsI 6819557 Bcep1808_2925 nagE # TF - NtrC: Bcep1808_2226 6817712 Bcep1808_1116 amtB 6816150 Bcep1808_5046 narK 6816149 Bcep1808_5045 nasD 6816148 Bcep1808_5044 nasE 6816147 Bcep1808_5043 nasBA 6818846 Bcep1808_2228 glnA 6818845 Bcep1808_2227 ntrB 6818844 Bcep1808_2226 ntrC # TF - RbsR: Bcep1808_1561 6818163 Bcep1808_1558 rbsB 6818164 Bcep1808_1559 rbsA 6818165 Bcep1808_1560 rbsC 6818166 Bcep1808_1561 rbsR 6818167 Bcep1808_1562 rbsK # TF - ModE: Bcep1808_4233 6815339 Bcep1808_4236 modA 6815338 Bcep1808_4235 modB 6815337 Bcep1808_4234 modC # TF - LexA: Bcep1808_1552 6817577 Bcep1808_0987 PF04055 6814893 Bcep1808_3790 PF10616 6814894 Bcep1808_3791 PF00589 6814287 Bcep1808_6497 uvrA 6818157 Bcep1808_1552 lexA 6819393 Bcep1808_2763 recA 6819392 Bcep1808_2762 recX 6815815 Bcep1808_4711 BPSS1334 6819564 Bcep1808_2932 imuA 6819563 Bcep1808_2931 imuB 6819562 Bcep1808_2930 dnaE2 6818839 Bcep1808_2222 dinB 6813098 Bcep1808_6888 imuA 6816020 Bcep1808_4916 PF08774 6816021 Bcep1808_4917 PF06733 6818626 Bcep1808_2009 imuA 6818625 Bcep1808_2008 imuB 6818624 Bcep1808_2007 dnaE2 6812310 Bcep1808_7144 imuA 6812309 Bcep1808_7143 imuB 6812308 Bcep1808_7142 dnaE2 # TF - PsrA: Bcep1808_1501 6818101 Bcep1808_1501 psrA 6817632 Bcep1808_1040 fabH 6817633 Bcep1808_1041 fabD 6817634 Bcep1808_1042 fabG 6817635 Bcep1808_1043 acpP 6817636 Bcep1808_1044 fabF # TF - RutR: Bcep1808_5508 6813299 Bcep1808_5509 pydC 6813300 Bcep1808_5510 pydX 6813301 Bcep1808_5511 pydA 6813302 Bcep1808_5512 pydP 6813303 Bcep1808_5513 pydB 6813298 Bcep1808_5508 rutR # TF - FadP: Bcep1808_2828 6818024 Bcep1808_1426 etfD 6819281 Bcep1808_2651 fadD2 6817102 Bcep1808_0523 fadD1 6819459 Bcep1808_2828 fadP 6819458 Bcep1808_2827 acdH 6819457 Bcep1808_2826 acdB 6819456 Bcep1808_2825 acdA 6819455 Bcep1808_2824 echH 6818444 Bcep1808_1838 fadB 6818443 Bcep1808_1837 pncA 6818442 Bcep1808_1836 fadA 6819686 Bcep1808_3054 nppD 6817573 Bcep1808_0983 etfB 6817574 Bcep1808_0984 etfA 6818944 Bcep1808_2318 null 6818943 Bcep1808_2317 acdQ 6818942 Bcep1808_2316 acdP 6818941 Bcep1808_2315 maoC 6818940 Bcep1808_2314 echI # TF - LiuQ: Bcep1808_3496 6814593 Bcep1808_3495 liuA 6814592 Bcep1808_3494 liuB 6814591 Bcep1808_3493 liuC 6814590 Bcep1808_3492 liuD 6814594 Bcep1808_3496 liuQ # TF - PaaR: Bcep1808_0306 6816173 Bcep1808_5069 paaH 6816172 Bcep1808_5068 paaK2 6816171 Bcep1808_5067 paaF2 6817094 Bcep1808_0520 paaZ 6817093 Bcep1808_0519 paaJ 6817092 Bcep1808_0518 paaF 6817091 Bcep1808_0517 paaY 6817090 Bcep1808_0516 paaK 6817095 Bcep1808_0521 paaG 6816876 Bcep1808_0312 paaA 6816875 Bcep1808_0311 paaB 6816874 Bcep1808_0310 paaC 6816873 Bcep1808_0309 paaD 6816872 Bcep1808_0308 paaE 6816871 Bcep1808_0307 paaW 6816870 Bcep1808_0306 paaR # RNA - FMN 6819424 Bcep1808_2793 ribB # RNA - TPP 6816962 Bcep1808_0389 thiO 6816963 Bcep1808_0390 thiS 6816964 Bcep1808_0391 thiG 6816965 Bcep1808_0392 thiE 6817728 Bcep1808_1132 thiC # RNA - Cobalamin 6818215 Bcep1808_1610 cobG 6818214 Bcep1808_1609 cbiC 6818213 Bcep1808_1608 cbiL 6818212 Bcep1808_1607 cbiGH 6818205 Bcep1808_1600 hoxN 6818206 Bcep1808_1601 cobW 6818207 Bcep1808_1602 cobN 6818208 Bcep1808_1603 chlI 6818209 Bcep1808_1604 chlD 6819168 Bcep1808_2539 btuC 6819167 Bcep1808_2538 btuD 6819166 Bcep1808_2537 cobT 6819165 Bcep1808_2536 cobS 6819164 Bcep1808_2535 cobC 6816105 Bcep1808_5001 btuB1 6818204 Bcep1808_1599 cysG 6818203 Bcep1808_1598 cbiG 6818202 Bcep1808_1597 btuR 6818201 Bcep1808_1596 cbiA # RNA - SAH_riboswitch 6816795 Bcep1808_0232 ahcY 6816796 Bcep1808_0233 PF04020 6816797 Bcep1808_0234 metF # RNA - ykkC-yxkD 6813365 Bcep1808_5575 uctB 6813366 Bcep1808_5576 amt1 6813367 Bcep1808_5577 amt2 6813368 Bcep1808_5578 ucaA 6813369 Bcep1808_5579 ucaB 6813370 Bcep1808_5580 uctP 6813371 Bcep1808_5581 uctA # RNA - Glycine 6816713 Bcep1808_0151 gcvT 6816712 Bcep1808_0150 gcvH 6816711 Bcep1808_0149 gcvP 6816710 Bcep1808_0148 null 6816709 Bcep1808_0147 sdaA 6812883 Bcep1808_6673 dadA # RNA - yybP-ykoY 6815046 Bcep1808_3943 COG0530 6817526 Bcep1808_0937 COG2119 # RNA - mini-ykkC 6818994 Bcep1808_2367 ykkC # RNA - sucA 6818074 Bcep1808_1474 sucA 6818075 Bcep1808_1475 sucB 6818076 Bcep1808_1476 lpdA # TF - YrdX: Bcep1808_6050 6813841 Bcep1808_6051 PF02635 6813842 Bcep1808_6052 COG388 6813843 Bcep1808_6053 COG2516 6813844 Bcep1808_6054 COG3153 6813845 Bcep1808_6055 COG2144 # TF - HrcA: Bcep1808_0706 6819552 Bcep1808_2920 rpoH 6817375 Bcep1808_0793 groS 6817376 Bcep1808_0794 groL # TF - NmlR: Bcep1808_1771 6818377 Bcep1808_1771 nmlR 6818376 Bcep1808_1770 pcaC # TF - CueR: Bcep1808_2302, Bcep1808_7183, Bcep1808_7261, Bcep1808_3973 6815076 Bcep1808_3973 cueR2 6815075 Bcep1808_3972 copA2 6812349 Bcep1808_7183 cueR2 6812428 Bcep1808_7262 copZ 6819707 Bcep1808_3075 copZ # TF - CadR-PbrR: Bcep1808_0130 6816693 Bcep1808_0131 cadA # TF - Bamb_4155: Bcep1808_5290 6816397 Bcep1808_5293 Bamb_4158 6816396 Bcep1808_5292 Bamb_4157 6816395 Bcep1808_5291 Bamb_4156 # TF - PtxS: Bcep1808_1674 6818283 Bcep1808_1678 kguE 6818282 Bcep1808_1677 kguK 6818281 Bcep1808_1676 kguT 6818280 Bcep1808_1675 kguD 6815897 Bcep1808_4793 gadC 6815898 Bcep1808_4794 gadB 6815899 Bcep1808_4795 gadA # TF - Bphy_4590: Bcep1808_1422 6818021 Bcep1808_1423 Bphy_4591 6818022 Bcep1808_1424 Bphy_4592 6818023 Bcep1808_1425 COG0329 6818020 Bcep1808_1422 Bphy_4590 # TF - ScrR: Bcep1808_4837 6815941 Bcep1808_4837 scrR 6815940 Bcep1808_4836 sacB 6815939 Bcep1808_4835 scrB # TF - GabR: Bcep1808_3588, Bcep1808_4394 6815499 Bcep1808_4395 gbtA 6815500 Bcep1808_4396 gbtD 6815501 Bcep1808_4397 gbtB 6815502 Bcep1808_4398 gbtC 6814692 Bcep1808_3589 gabT 6814693 Bcep1808_3590 gabD # TF - BPSL1304: Bcep1808_1143 6817739 Bcep1808_1143 BPSL1304 6817738 Bcep1808_1142 RSc1791 6817737 Bcep1808_1141 RSc1792 6817736 Bcep1808_1140 RSc1793 6817735 Bcep1808_1139 RSc1794 6817734 Bcep1808_1138 RSc1795 # TF - FdsR: Bcep1808_0955 6817543 Bcep1808_0954 fdsG 6817542 Bcep1808_0953 fdsB 6817541 Bcep1808_0952 fdsA 6817540 Bcep1808_0951 fdsD 6817544 Bcep1808_0955 fdsR # TF - UraR: Bcep1808_1891 6818500 Bcep1808_1891 uraR 6818499 Bcep1808_1890 pbuT 6818498 Bcep1808_1889 hyuE 6818497 Bcep1808_1888 COG0726 6818496 Bcep1808_1887 uraO 6818495 Bcep1808_1886 allC 6818494 Bcep1808_1885 allA # TF - UreR: Bcep1808_0613 6817193 Bcep1808_0613 ureR 6817194 Bcep1808_0614 dctA 6817195 Bcep1808_0615 allH 6817196 Bcep1808_0616 ureH # TF - MetR: Bcep1808_3538 6814636 Bcep1808_3538 metR 6814635 Bcep1808_3537 metE # TF - EutR: Bcep1808_5465 6813249 Bcep1808_5464 eutB 6813248 Bcep1808_5463 eutC 6813247 Bcep1808_5462 eutD 6813246 Bcep1808_5461 eutE 6813245 Bcep1808_5460 doeX 6813244 Bcep1808_5459 doeC 6813243 Bcep1808_5458 doeD 6813250 Bcep1808_5465 eutR # TF - PdxW: Bcep1808_5059 6816164 Bcep1808_5060 PF00583 # TF - BPSL1086: Bcep1808_2435 6814839 Bcep1808_3736 PF01810 6819063 Bcep1808_2436 BMA1950 6819064 Bcep1808_2437 PF00892 6819065 Bcep1808_2438 aspB 6819066 Bcep1808_2439 COG251 (TdcF) 6819067 Bcep1808_2440 COG384 (PhzF) # TF - Bamb_4265: Bcep1808_5370 6816473 Bcep1808_5369 COG697 # TF - ModE2: Bcep1808_7293 6812748 Bcep1808_7470 modA2 6812747 Bcep1808_7469 modCB2 6813887 Bcep1808_6097 modA2 6813886 Bcep1808_6096 modCB2 6818251 Bcep1808_1646 modA2 6818250 Bcep1808_1645 modCB2 6812854 Bcep1808_6644 modA2 6812855 Bcep1808_6645 modCB2 # TF - SdhR: Bcep1808_4409 6816101 Bcep1808_4997 aceA 6813462 Bcep1808_5672 acnB 6815513 Bcep1808_4409 sdhR 6815514 Bcep1808_4410 sdhC 6815515 Bcep1808_4411 sdhD 6815516 Bcep1808_4412 sdhA 6815517 Bcep1808_4413 sdhB 6815518 Bcep1808_4414 COG2938 6815519 Bcep1808_4415 gltA 6815512 Bcep1808_4408 mdh 6815511 Bcep1808_4407 citE 6819232 Bcep1808_2602 icd # TF - BPSS1200: Bcep1808_4832 6815935 Bcep1808_4831 PF02627 6815934 Bcep1808_4830 PF07883 # TF - BPSS0970: Bcep1808_5103 6816208 Bcep1808_5104 fdhA2 6816209 Bcep1808_5105 COG3781 # TF - YdcR: Bcep1808_5040 6815203 Bcep1808_4100 PF11174 6813858 Bcep1808_6068 cysI 6813857 Bcep1808_6067 COG3749 # TF - Bamb_3558: Bcep1808_4710 6815813 Bcep1808_4709 null # TF - Bcep1808_4966: Bcep1808_4966 6816069 Bcep1808_4965 PF01810 # TF - Bcep18194_B0628: Bcep1808_3378 6814484 Bcep1808_3386 Bamb_4451 6814483 Bcep1808_3385 mhpD 6814482 Bcep1808_3384 COG4948 6814481 Bcep1808_3383 Bamb_4448 6814480 Bcep1808_3382 Bamb_4447 6814479 Bcep1808_3381 Bamb_4446 6814478 Bcep1808_3380 Bamb_4445 6814477 Bcep1808_3379 Bamb_4444 6814476 Bcep1808_3378 Bamb_4443 # TF - EutR: Bcep1808_5278 6816382 Bcep1808_5278 eutR 6816381 Bcep1808_5277 PF01019 # TF - GguR: Bcep1808_1082 6814954 Bcep1808_3851 pgl 6814665 Bcep1808_3562 kgsD 6817678 Bcep1808_1082 gguR 6814663 Bcep1808_3560 garD 6815478 Bcep1808_4374 mcp 6814362 Bcep1808_6572 uxuP 6814361 Bcep1808_6571 uxuQ 6814360 Bcep1808_6570 uxuM 6817677 Bcep1808_1081 gudD 6814664 Bcep1808_3561 kdgD 6814666 Bcep1808_3563 gudP 6818875 Bcep1808_2255 uxuF # TF - UdhR: Bcep1808_3988 6815090 Bcep1808_3987 exuT 6815091 Bcep1808_3988 udhR 6815092 Bcep1808_3989 udh