Regulon of HutC in Burkholderia vietnamiensis G4
| Regulator type: | Transcription factor |
| TF locus tag: | Bcep1808_5574, Bcep1808_3731, Bcep1808_4120, Bcep1808_2246 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Regulog: | HutC - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -169
Score: 5.5 Sequence: CTAGTTGTATATACAACAAT
Locus tag: Bcep1808_1206
Name: COG1457 (CodB) Funciton: Permease, cytosine/purines, uracil, thiamine, allantoin family protein |
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COG1457 (CodB)
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Permease, cytosine/purines, uracil, thiamine, allantoin family protein
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Position: -235
Score: 4.3 Sequence: AAATTTGTCTAGTCATCCTG
Position: -75
Score: 5.1 Sequence: ATGCTTGTATAGACAAATTC
Locus tag: Bcep1808_5569
Name: hisJ2 Funciton: Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1)
Locus tag: Bcep1808_5570
Name: hisQ2 Funciton: Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
Locus tag: Bcep1808_5571
Name: hisM2 Funciton: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
Locus tag: Bcep1808_5572
Name: hisP2 Funciton: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
Locus tag: Bcep1808_5573
Name: hutH2 Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: Bcep1808_5574
Name: hutC Funciton: Histidine utilization repressor, GntR family |
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hisJ2
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Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1)
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hisQ2
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Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
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hisM2
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Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
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hisP2
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Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
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hutH2
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Histidine ammonia-lyase (EC 4.3.1.3)
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hutC
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Histidine utilization repressor, GntR family
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Position: -71
Score: 5.3 Sequence: CGGGTTGTCTAGACAAGTCG
Position: -26
Score: 5.6 Sequence: GAACTTGTCTAGACAGGATT
Locus tag: Bcep1808_2247
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: Bcep1808_2246
Name: hutC Funciton: Histidine utilization repressor, GntR family
Locus tag: Bcep1808_2245
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Bcep1808_2244
Name: hutD Funciton: Conserved hypothetical protein related to histidine degradation
Locus tag: Bcep1808_2243
Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: Bcep1808_2242
Name: hutF Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Locus tag: Bcep1808_2241
Name: hutG Funciton: N-formylglutamate deformylase (EC 3.5.1.68) |
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hutH
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Histidine ammonia-lyase (EC 4.3.1.3)
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hutC
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Histidine utilization repressor, GntR family
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hutU
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Urocanate hydratase (EC 4.2.1.49)
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hutD
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Conserved hypothetical protein related to histidine degradation
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hutI
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Imidazolonepropionase (EC 3.5.2.7)
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hutF
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Formiminoglutamic iminohydrolase (EC 3.5.3.13)
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hutG
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N-formylglutamate deformylase (EC 3.5.1.68)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |