Regulons of Rhodobacter sphaeroides 2.4.1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BioR		Biotin biosynthesis	3	3
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	1	1
TF	CceR (GapR)	6-phosphogluconate	Central carbohydrate metabolism	14	9
TF	Chvl			1	1
TF	CueR	Copper ion, (Cu+)	Copper resistance	2	2
TF	EutR		Ectoine utilization	3	4
TF	EutR	Ethanolamine	Ethanolamine utilization	2	4
TF	FnrN	Oxygen	Oxidative stress response; Nitrogen fixation	9	11
TF	FruR2	Fructose-1-phosphate	Fructose utilization	2	3
TF	HrcA	Heat shock	Heat shock response	2	1
TF	HutC	cis-Urocanic acid	Histidine utilization	2	2
TF	Irr	Heme	Iron homeostasis	7	2
TF	IscR	Iron-sulfur cluster redox state; Iron ion, (Fe2+)	Iron-sulfur cluster biogenesis; Iron homeostasis	13	10
TF	Jann_1459		Sugar utilization	2	4
TF	LexA	DNA damage	SOS response	10	8
TF	LiuR		Branched-chain amino acid degradation	1	1
TF	MetR	Homocysteine	Methionine biosynthesis	4	3
TF	ModE	Molybdate	Molybdopterin biosynthesis	3	3
TF	Mur	Manganese ion, (Mn2+)	Manganese homeostasis	3	1
TF	NifA		Nitrogen fixation	7	12
TF	NikR	Nickel ion, (Ni2+)	Nickel homeostasis	1	1
TF	NnrR	Nitric oxide	Denitrification	4	4
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	8	5
TF	PdxR2		Pyridoxine biosynthesis	1	2
TF	PpsR	Blue light	Photosynthesis	12	17
TF	RbsR2	Ribose	Ribose utilization	2	3
TF	RbtR	Ribitol	Ribitol utilization	2	4
TF	RutR	Uracil	Pyrimidine utilization	10	6
TF	SocR		Santhopine utilization	1	1
TF	TauR	Taurine	Taurine utilization	2	1
TF	UxuR1	Glucuronate; Galacturonate	Glucuronate utilization; Galacturonate utilization	2	3
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	3	3
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	9	6
RNA	Glycine	Glycine	Glycine metabolism	1	2
RNA	S15		Ribosome biogenesis	1	1
RNA	SAM-SAH	S-adenosylmethionine; S-adenosylhomocysteine	Methionine metabolism	1	1
RNA	SAM_alpha	S-adenosylmethionine	Methionine biosynthesis	3	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	4	2
RNA	serC		Serine biosynthesis	1	1
RNA	ykkC-yxkD		Multidrug resistance	1	1

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Rhodobacter sphaeroides 2.4.1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --