Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Rhodobacter sphaeroides 2.4.1

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF BioR Biotin biosynthesis 3 3
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 1 1
TF CceR (GapR) 6-phosphogluconate Central carbohydrate metabolism 14 9
TF Chvl 1 1
TF CueR Copper ion, (Cu+) Copper resistance 2 2
TF EutR Ectoine utilization 3 4
TF EutR Ethanolamine Ethanolamine utilization 2 4
TF FnrN Oxygen Oxidative stress response; Nitrogen fixation 9 11
TF FruR2 Fructose-1-phosphate Fructose utilization 2 3
TF HrcA Heat shock Heat shock response 2 1
TF HutC cis-Urocanic acid Histidine utilization 2 2
TF Irr Heme Iron homeostasis 7 2
TF IscR Iron-sulfur cluster redox state; Iron ion, (Fe2+) Iron-sulfur cluster biogenesis; Iron homeostasis 13 10
TF Jann_1459 Sugar utilization 2 4
TF LexA DNA damage SOS response 10 8
TF LiuR Branched-chain amino acid degradation 1 1
TF MetR Homocysteine Methionine biosynthesis 4 3
TF ModE Molybdate Molybdopterin biosynthesis 3 3
TF Mur Manganese ion, (Mn2+) Manganese homeostasis 3 1
TF NifA Nitrogen fixation 7 12
TF NikR Nickel ion, (Ni2+) Nickel homeostasis 1 1
TF NnrR Nitric oxide Denitrification 4 4
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 1
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 8 5
TF PdxR2 Pyridoxine biosynthesis 1 2
TF PpsR Blue light Photosynthesis 12 17
TF RbsR2 Ribose Ribose utilization 2 3
TF RbtR Ribitol Ribitol utilization 2 4
TF RutR Uracil Pyrimidine utilization 10 6
TF SocR Santhopine utilization 1 1
TF TauR Taurine Taurine utilization 2 1
TF UxuR1 Glucuronate; Galacturonate Glucuronate utilization; Galacturonate utilization 2 3
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 3 3
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 9 6
RNA Glycine Glycine Glycine metabolism 1 2
RNA S15 Ribosome biogenesis 1 1
RNA SAM-SAH S-adenosylmethionine; S-adenosylhomocysteine Methionine metabolism 1 1
RNA SAM_alpha S-adenosylmethionine Methionine biosynthesis 3 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 4 2
RNA serC Serine biosynthesis 1 1
RNA ykkC-yxkD Multidrug resistance 1 1
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