Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FnrN in Rhodobacter sphaeroides 2.4.1

Properties
Regulator type: Transcription factor
TF locus tag: RSP_0698
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Oxidative stress response; Nitrogen fixation
Effector: Oxygen
Regulog: FnrN - Rhodobacterales
Statistics of regulated genes:
- Genes 20
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 85 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -87
Score: 5.2
Sequence: GATTTGATCCTTATCAAGGC
Locus tag: RSP_2984
Name: hemA
Funciton: 5-aminolevulinate synthase (EC 2.3.1.37)
RSP_2984
hemA
5-aminolevulinate synthase (EC 2.3.1.37)
Position: -111
Score: 5.4
Sequence: GCCTTGATCCATGTCAATGG
Position: -79
Score: 5.1
Sequence: TACTTGATCCTCATCAAGGA
Locus tag: RSP_0697
Name: uspA
Funciton: Predicted universal stress protein UspA
RSP_0697
uspA
Predicted universal stress protein UspA
Position: -136
Score: 5.1
Sequence: TCCTTGATGAGGATCAAGTA
Position: -104
Score: 5.4
Sequence: CCATTGACATGGATCAAGGC
Locus tag: RSP_0696
Name: ccoN
Funciton: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
Locus tag: RSP_0695
Name: ccoO
Funciton: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Locus tag: RSP_0694
Name: ccoQ
Funciton: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)
Locus tag: RSP_0693
Name: ccoP
Funciton: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
Locus tag: RSP_0692
Name: ccoG
Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation
Locus tag: RSP_0691
Name: ccoH
Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoH
Locus tag: RSP_0690
Name: ccoI
Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
Locus tag: RSP_0689
Name: ccoS
Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion
RSP_0696
ccoN
Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
RSP_0695
ccoO
Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
RSP_0694
ccoQ
Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)
RSP_0693
ccoP
Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
RSP_0692
ccoG
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation
RSP_0691
ccoH
Type cbb3 cytochrome oxidase biogenesis protein CcoH
RSP_0690
ccoI
Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
RSP_0689
ccoS
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion
Position: -31
Score: 5.5
Sequence: GCTTTGATTCAGATCAAGCG
Locus tag: RSP_0698
Name: fnrN
Funciton: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family
RSP_0698
fnrN
Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family
Position: -81
Score: 5.2
Sequence: GAATTGATCTAAGTCAAAGG
Locus tag: RSP_2395
Name: ccpR
Funciton: Cytochrome c551 peroxidase (EC 1.11.1.5)
RSP_2395
ccpR
Cytochrome c551 peroxidase (EC 1.11.1.5)
Position: -69
Score: 5.4
Sequence: CCATTGACGCAGATCAAGGC
Locus tag: RSP_2507
Name: ompW
Funciton: Outer membrane protein W precursor
RSP_2507
ompW
Outer membrane protein W precursor
Position: -51
Score: 5.5
Sequence: CGCTTGATCTGAATCAAAGC
Locus tag: RSP_0699
Name: hemN
Funciton: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
RSP_0699
hemN
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
Position: -127
Score: 5.6
Sequence: TTATTGATCCAGATCAAAGT
Locus tag: RSP_1877
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
RSP_1877
ctaD
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Position: -161
Score: 5.5
Sequence: TCCTTGATTCAGATCAAATG
Locus tag: RSP_1826
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: RSP_1827
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Locus tag: RSP_6021
Name: ctaX
Funciton: Hypothetical protein in cta gene cluster
Locus tag: RSP_1828
Name: ctaG
Funciton: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: RSP_1829
Name: ctaE
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
RSP_1826
ctaC
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
RSP_1827
ctaB
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
RSP_6021
ctaX
Hypothetical protein in cta gene cluster
RSP_1828
ctaG
Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
RSP_1829
ctaE
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
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