Profile of regulator FnrN in Rhodobacterales
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Oxidative stress response; Nitrogen fixation |
| Effector: | Oxygen |
| Regulog: | FnrN - Rhodobacterales |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - FnrN/FixK
- By TF family - CRP
- By effector - Oxygen
- By pathway - Oxidative stress response
- By pathway - Nitrogen fixation
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Jannaschia sp. CCS1 | |||||
| Jann_3858 | fnrN | -56 | 5.4 | GCATTGATTTGGATCAAGCG | |
| Jann_1933 | hemA | -67 | 5.9 | CCTTTGATCCAGATCAAAGC | |
| Jann_3859 | hemN | -51 | 5.4 | CGCTTGATCCAAATCAATGC | |
| Jann_3857 | ccoN | -126 | 5.6 | GGCTTGACCCAGATCAAGGT | |
| Jann_3853 | ccoG | -84 | 5.4 | AACTTGATCCACGTCAAAGC | |
| Loktanella vestfoldensis SKA53 | |||||
| SKA53_02751 | hemA | -167 | 4.9 | TTATTGATCCAGATCATGGT | |
| SKA53_08751 | uspA | -136 | 5.1 | TCGTTGATGTGGATCAACCC | |
| SKA53_08751 | uspA | -114 | 5.3 | CGTTTGACATGGATCAATGC | |
| SKA53_08741 | ccoN | -105 | 5.3 | GCATTGATCCATGTCAAACG | |
| SKA53_08741 | ccoN | -83 | 5.1 | GGGTTGATCCACATCAACGA | |
| SKA53_08641 | ccoG | -177 | 5.6 | TGCTTGATCCACATCAAGGA | |
| Oceanicola batsensis HTCC2597 | |||||
| OB2597_01932 | hemA | -155 | 5.3 | GAATTGATTCACATCAAGGA | |
| OB2597_06915 | ctaD | -113 | 5.2 | TATTTGATCTGCGTCAATAC | |
| OB2597_15845 | ctaC | -189 | 5.6 | TTCTTGATCCAGATCAAAAA | |
| OB2597_20571 | ccoN | -73 | 4.9 | CAATTGACCCAAGTCAAAAC | |
| OB2597_20591 | ccoG | -77 | 5.7 | GCCTTGATGCAGATCAAAGG | |
| Oceanicola granulosus HTCC2516 | |||||
| OG2516_17525 | uspA | -74 | 5.9 | GCCTTGATCTGGATCAAGGT | |
| Paracoccus denitrificans PD1222 | |||||
| Pden_1850 | fnrN | -131 | 5.3 | ACCTTGACCCAAATCAAATG | |
| Pden_1851 | hemN | -51 | 5.3 | CATTTGATTTGGGTCAAGGT | |
| Pden_1822 | hemA | -40 | 5.4 | GGCTTGATGCGTATCAAGGT | |
| Pden_1849 | uspA | -146 | 5.3 | ACTTTGATCTGCGTCAATCT | |
| Pden_3636 | ompW | -51 | 5.5 | ATCTTGATCCAGATCAACGT | |
| Pden_0893 | ccpR | -141 | 5.1 | CATCTGACCCAGATCAAAGC | |
| Pden_1848 | ccoN | -124 | 5.3 | AGATTGACGCAGATCAAAGT | |
| Pden_1844 | ccoG | -70 | 5.3 | CGCTTGACGCAGATCAATGC | |
| Rhodobacter sphaeroides 2.4.1 | |||||
| RSP_1877 | ctaD | -127 | 5.6 | TTATTGATCCAGATCAAAGT | |
| RSP_0698 | fnrN | -31 | 5.5 | GCTTTGATTCAGATCAAGCG | |
| RSP_1826 | ctaC | -161 | 5.5 | TCCTTGATTCAGATCAAATG | |
| RSP_0699 | hemN | -51 | 5.5 | CGCTTGATCTGAATCAAAGC | |
| RSP_2984 | hemA | -87 | 5.2 | GATTTGATCCTTATCAAGGC | |
| RSP_0696 | ccoN | -136 | 5.1 | TCCTTGATGAGGATCAAGTA | |
| RSP_0697 | uspA | -111 | 5.4 | GCCTTGATCCATGTCAATGG | |
| RSP_0697 | uspA | -79 | 5.1 | TACTTGATCCTCATCAAGGA | |
| RSP_0696 | ccoN | -104 | 5.4 | CCATTGACATGGATCAAGGC | |
| RSP_2507 | ompW | -69 | 5.4 | CCATTGACGCAGATCAAGGC | |
| RSP_2395 | ccpR | -81 | 5.2 | GAATTGATCTAAGTCAAAGG | |
| Rhodobacterales bacterium HTCC2654 | |||||
| RB2654_06514 | ctaC | -192 | 5.3 | GCATTGATCTGCATCAATCG | |
| RB2654_10044 | fnrN | -29 | 5.3 | ACATTGATACGGATCAAATG | |
| RB2654_08222 | ctaD | -212 | 5.6 | TCCTTGACCCGGATCAAACA | |
| RB2654_10034 | uspA | -143 | 5.4 | ACCTTGATCCATGTCAAAAC | |
| RB2654_10034 | uspA | -100 | 5.3 | GATTTGACACATATCAAAGC | |
| RB2654_03389 | hemA | -127 | 5.3 | GGTTTGATCCACGTCAACGC | |
| RB2654_10049 | hemN | -52 | 5.3 | CATTTGATCCGTATCAATGT | |
| RB2654_10029 | ccoN | -168 | 5.3 | GCTTTGATATGTGTCAAATC | |
| RB2654_10029 | ccoN | -125 | 5.4 | GTTTTGACATGGATCAAGGT | |
| RB2654_10004 | ccoG | 0 | 5.2 | ATGTTGATCCAAGTCAAGGC | |
| Roseobacter sp. MED193 | |||||
| MED193_08963 | ctaC | -178 | 5.4 | TTTTTGATCTAAATCAAGAA | |
| MED193_11238 | fnrN | -29 | 5.3 | ACTTTGACTTGGATCAAACG | |
| MED193_21064 | hemA | -162 | 5.4 | TATTTGACCTGTATCAAAGT | |
| MED193_08728 | ctaD | -122 | 5.6 | ATCTTGATCCAGATCAAACT | |
| MED193_11233 | uspA | -114 | 5.5 | GCATTGATCTGCATCAAGAC | |
| MED193_11228 | ccoN | -93 | 5.5 | GTCTTGATGCAGATCAATGC | |
| MED193_11193 | ccoG | -180 | 5.4 | TTTTTGATCCACGTCAAAGA | |
| Roseovarius sp. 217 | |||||
| ROS217_04445 | ctaC | -219 | 5.2 | AATTTGATTTAAATCAAAAA | |
| ROS217_21737 | hemA | -168 | 5.2 | GACTTGACCCAAGTCAAGGA | |
| ROS217_12216 | fnrN | -53 | 5.3 | GCTTTGATTTAGATCAACCG | |
| ROS217_15111 | ctaD | -128 | 5.4 | TCTTTGATCTGCATCAATTT | |
| ROS217_12221 | uspA | -111 | 5.4 | TCCTTGATCTGTGTCAAAAC | |
| ROS217_12221 | uspA | -79 | 5.4 | CGTTTGATCCGCGTCAAGGC | |
| ROS217_12211 | hemN | -51 | 5.3 | CGGTTGATCTAAATCAAAGC | |
| ROS217_20807 | ompW | -75 | 5.2 | AACTTGACCCAAATCAATGT | |
| ROS217_12226 | ccoN | -143 | 5.4 | GCCTTGACGCGGATCAAACG | |
| ROS217_12226 | ccoN | -111 | 5.4 | GTTTTGACACAGATCAAGGA | |
| ROS217_12261 | ccoG | -73 | 5.5 | AATTTGATGCAGGTCAAAGC | |
| Silicibacter TM1040 | |||||
| TM1040_2336 | ctaC | -164 | 5.2 | TTTTTGATCTAAGTCAAGAA | |
| TM1040_0860 | hemA | -169 | 5.4 | TATTTGACCTGTATCAAGGA | |
| TM1040_2547 | fnrN | -29 | 5.2 | GCTTTGACACAGATCAACCA | |
| TM1040_2291 | ctaD | -125 | 5.6 | TTCTTGATCCAGATCAAACT | |
| TM1040_2546 | uspA | -126 | 5.4 | ACATTGATCTGTATCAAGAT | |
| TM1040_2548 | hemN | -51 | 5.2 | TGGTTGATCTGTGTCAAAGC | |
| TM1040_0734 | ompW | -78 | 5.2 | CATTTGATCTAGATCAGAGC | |
| TM1040_2545 | ccoN | -117 | 5.4 | ATCTTGATACAGATCAATGT | |
| TM1040_2540 | ccoG | -79 | 5.4 | TTTTTGATCCACGTCAAAGT | |
| Silicibacter pomeroyi DSS-3 | |||||
| SPO3076 | ctaC | -162 | 5.6 | TGTTTGATCCAGATCAAAAA | |
| SPO2596 | hemA | -146 | 5.1 | TAATTGACCCAAGTCAAGGC | |
| SPO3531 | fnrN | -32 | 5.4 | ACCTTGACTCAGATCAAGTA | |
| SPO1383 | ctaD | -120 | 5.6 | ATCTTGATCCAGATCAAACT | |
| SPO3527 | uspA | -98 | 5.7 | GCTTTGATCTGCATCAAGAC | |
| SPO3532 | hemN | -52 | 5.4 | TACTTGATCTGAGTCAAGGT | |
| SPO2792 | ompW | -75 | 5.2 | ATCTTGATCCAGATCAGGGA | |
| SPO0330 | ccpR | -96 | 5.5 | CGCTTGATCCATATCAAAGT | |
| SPO3526 | ccoN | -110 | 5.7 | GTCTTGATGCAGATCAAAGC | |
| SPO3522 | ccoG | -80 | 5.4 | TTTTTGACCCATATCAAAGT | |
| Sulfitobacter sp. EE-36 | |||||
| EE36_02238 | ccoN | -72 | 5.7 | CATTTGATCTAGATCAAGGC | |
| EE36_02218 | ccoG | -74 | 5.6 | TGTTTGATGCAGATCAAAGC | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |