Regulon of Cobalamin in Rhodobacter sphaeroides 2.4.1

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Rhodobacterales
Under regulation:
- Genes	20
- Operons	6

Member of regulog collections

By taxonomy - Rhodobacterales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -223 Score: 92.2 Sequence: CTTTGTGGCAGGGGT... Locus tag: RSP_3218 Name: bluB Funciton: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
	RSP_3218	bluB	Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
Position: -373 Score: 100.6 Sequence: CGGCTACTCAATCCT... Locus tag: RSP_3392 Name: btuF Funciton: ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component Locus tag: RSP_3391 Name: btuC Funciton: ABC transporter (iron.B12.siderophore.hemin) , permease component Locus tag: RSP_3390 Name: btuD Funciton: ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component
	RSP_3392	btuF	ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component
	RSP_3391	btuC	ABC transporter (iron.B12.siderophore.hemin) , permease component
	RSP_3390	btuD	ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component
Position: -293 Score: 107.7 Sequence: CGGAAGGTGCGGGCG... Locus tag: RSP_0787 Name: RSP_0787 Funciton: hypothetical protein Locus tag: RSP_0788 Name: pduX Funciton: hypothetical protein Locus tag: RSP_0789 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
	RSP_0787	RSP_0787	hypothetical protein
	RSP_0788	pduX	hypothetical protein
	RSP_0789	cobD	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Position: -326 Score: 129.1 Sequence: TATTGAGGAACGGCT... Locus tag: RSP_2402 Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: RSP_2403 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: RSP_2404 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: RSP_2405 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: RSP_2406 Name: cbiZ Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
	RSP_2402	btuB	Outer membrane vitamin B12 receptor BtuB
	RSP_2403	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	RSP_2404	btuC	Vitamin B12 ABC transporter, permease component BtuC
	RSP_2405	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	RSP_2406	cbiZ	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Position: -292 Score: 75.6 Sequence: ACCACTTCCGGCGCG... Locus tag: RSP_2829 Name: cfrX Funciton: Predicted metal-binding protein Locus tag: RSP_2828 Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis Locus tag: RSP_2827 Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis Locus tag: RSP_6217 Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Locus tag: RSP_2826 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Locus tag: RSP_2824 Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
	RSP_2829	cfrX	Predicted metal-binding protein
	RSP_2828	cobW	CobW GTPase involved in cobalt insertion for B12 biosynthesis
	RSP_2827	cobN	CobN component of cobalt chelatase involved in B12 biosynthesis
	RSP_6217	cbiC	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
	RSP_2826	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	RSP_2824	cbiH	Cobalt-precorrin-3b C17-methyltransferase
Position: -275 Score: 109.1 Sequence: TGTCACGCCGGGCTA... Locus tag: RSP_3186 Name: cbtC Funciton: Predicted cobalt transporter CbtC Locus tag: RSP_3185 Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase
	RSP_3186	cbtC	Predicted cobalt transporter CbtC
	RSP_3185	cbiA	Cobyrinic acid A,C-diamide synthase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Cobalamin in Rhodobacter sphaeroides 2.4.1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --