Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CceR (GapR) in Rhodobacter sphaeroides 2.4.1

Properties
Regulator type: Transcription factor
TF locus tag: RSP_1663
Regulator family: LacI
Regulation mode:
Biological process: Central carbohydrate metabolism
Effector: 6-phosphogluconate
Regulog: CceR (GapR) - Rhodobacterales
Statistics of regulated genes:
- Genes 19
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 177 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -38
Score: 6
Sequence: GGCCGTTAGCGCTAACAGGC
Locus tag: RSP_2734
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: RSP_2735
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: RSP_2736
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
RSP_2734
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
RSP_2735
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
RSP_2736
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -70
Score: 5
Sequence: TGCCTTTAGCGCAAACATCT
Locus tag: RSP_0968
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
RSP_0968
mdh
Malate dehydrogenase (EC 1.1.1.37)
Position: -188
Score: 3.9
Sequence: CGGAGGTTGCGCCAACCTGT
Position: -168
Score: 5.2
Sequence: CGCTGGTTGCGCTAACGTCT
Locus tag: RSP_1680
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
RSP_1680
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Position: -288
Score: 4.8
Sequence: CGATGTTAGCGGCACCATCG
Locus tag: RSP_2296
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: RSP_2297
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: RSP_2298
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: RSP_2299
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: RSP_2300
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
RSP_2296
atpH
ATP synthase delta chain (EC 3.6.3.14)
RSP_2297
atpA
ATP synthase alpha chain (EC 3.6.3.14)
RSP_2298
atpG
ATP synthase gamma chain (EC 3.6.3.14)
RSP_2299
atpD
ATP synthase beta chain (EC 3.6.3.14)
RSP_2300
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -79
Score: 4.9
Sequence: CCAAGTTAGCGCGAACAACA
Locus tag: RSP_4045
Name: fba
Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
RSP_4045
fba
Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
Position: -98
Score: 5.5
Sequence: GGCCGTTATCGCTAACATGG
Locus tag: RSP_1663
Name: cceR
Funciton: Transcriptional regulator for central carbohydrate metabolism, LacI family
RSP_1663
cceR
Transcriptional regulator for central carbohydrate metabolism, LacI family
Position: -2160
Score: 5.5
Sequence: GCTAGTTAGCGCTAACAAAC
Locus tag: RSP_2645
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
RSP_2645
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -189
Score: 5.1
Sequence: GCATGATTGCGCAAACATGT
Locus tag: RSP_0974
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: RSP_0975
Name: sdhD
Funciton: succinate dehydrogenase, cytochrome b subunit
Locus tag: RSP_0976
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: RSP_0977
Name: RSP_0977
Funciton: hypothetical protein
Locus tag: RSP_0978
Name: RSP_0978
Funciton: hypothetical protein
Locus tag: RSP_0979
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
RSP_0974
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
RSP_0975
sdhD
succinate dehydrogenase, cytochrome b subunit
RSP_0976
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
RSP_0977
RSP_0977
hypothetical protein
RSP_0978
RSP_0978
hypothetical protein
RSP_0979
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
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