Regulog PerR - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Peroxide stress response; Oxidative stress response
Effector:	Hydrogen peroxide
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 51 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - FUR
By effector - Hydrogen peroxide
By pathway - Peroxide stress response
By pathway - Oxidative stress response

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838	9	4
Bacteroides dorei DSM 17855	13	7
Bacteroides eggerthii DSM 20697	9	4
Bacteroides fragilis NCTC 9343	6	3
Bacteroides ovatus ATCC 8483	5	3
Bacteroides plebeius DSM 17135	8	5
Bacteroides stercoris ATCC 43183	10	4
Bacteroides thetaiotaomicron VPI-5482	8	3
Bacteroides uniformis ATCC 8492	10	5
Bacteroides vulgatus ATCC 8482	12	7
Bacteroides coprophilus DSM 18228	9	6

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
perR	* Bacteroides cellulosilyticus DSM 14838 Site: position = -36 score = 6.58088 sequence = AAAAATGTAATTATTACAAGTTT Gene: BACCELL_05678: Peroxide stress regulator PerR, Fur family	* Bacteroides dorei DSM 17855 Site: position = -30 score = 6.05145 sequence = AAAATTGTAATAGTTACAAAAAG Gene: BACDOR_03683: Peroxide stress regulator PerR, Fur family	* Bacteroides eggerthii DSM 20697 Site: position = -37 score = 6.58088 sequence = AAAAATGTAATTATTACAAGTTT Gene: BACEGG_01512: Peroxide stress regulator PerR, Fur family	* Bacteroides fragilis NCTC 9343 Site: position = -39 score = 6.80317 sequence = AAAATTGTAATGAATACAATTTT Gene: BF3019: Peroxide stress regulator PerR, Fur family	* Bacteroides ovatus ATCC 8483 Site: position = -40 score = 6.32635 sequence = ATAATTGTAATGAATACAACTTT Gene: BACOVA_00376: Peroxide stress regulator PerR, Fur family	* Bacteroides plebeius DSM 17135 Site: position = -33 score = 5.89881 sequence = AGAATTGTAACAATTACATAATT Gene: BACPLE_02660: Peroxide stress regulator PerR, Fur family	* Bacteroides stercoris ATCC 43183 Site: position = -37 score = 6.58088 sequence = AAAAATGTAATTATTACAAGTTT Gene: BACSTE_01825: Peroxide stress regulator PerR, Fur family	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -40 score = 6.32635 sequence = ATAATTGTAATGAATACAACTTT Gene: BT0215: Peroxide stress regulator PerR, Fur family	* Bacteroides uniformis ATCC 8492 Site: position = -38 score = 6.58088 sequence = AAAAATGTAATAATTACAAGTTT Gene: BACUNI_01378: Peroxide stress regulator PerR, Fur family	* Bacteroides vulgatus ATCC 8482 Site: position = -30 score = 6.05145 sequence = AAAATTGTAATAGTTACAAAAAG Gene: BVU_2366: Peroxide stress regulator PerR, Fur family	* Bacteroides coprophilus DSM 18228 Site: position = -33 score = 6.11174 sequence = AAAATTGTAATAGTTACAGAATT Gene: BACCOPRO_01403: Peroxide stress regulator PerR, Fur family	Peroxide stress regulator PerR, Fur family
rbr	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_05679: Rubrerythrin	Bacteroides dorei DSM 17855 Gene: BACDOR_03684: Rubrerythrin	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01511: Rubrerythrin	Bacteroides fragilis NCTC 9343 Gene: BF3018: Rubrerythrin	Bacteroides ovatus ATCC 8483 Gene: BACOVA_00378: Rubrerythrin	Bacteroides plebeius DSM 17135 Gene: BACPLE_02659: Rubrerythrin	Bacteroides stercoris ATCC 43183 Gene: BACSTE_01824: Rubrerythrin	Bacteroides thetaiotaomicron VPI-5482 Gene: BT0216: Rubrerythrin	Bacteroides uniformis ATCC 8492 Gene: BACUNI_01379: Rubrerythrin	Bacteroides vulgatus ATCC 8482 Gene: BVU_2367: Rubrerythrin	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_01402: Rubrerythrin	Rubrerythrin

CRON 2.
rbr2	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_02076: Rubrerythrin	* Bacteroides dorei DSM 17855 Site: position = -93 score = 6.65395 sequence = ATAATTGTAATGAATACAATTTT Gene: BACDOR_01950: Rubrerythrin	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03320: Rubrerythrin	Bacteroides fragilis NCTC 9343 Gene: BF0020: Rubrerythrin	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02877: Rubrerythrin	* Bacteroides plebeius DSM 17135 Site: position = -94 score = 6.67315 sequence = AAAATTGTAATGATTTCAAATTT Gene: BACPLE_00297: Rubrerythrin	Bacteroides stercoris ATCC 43183 Gene: BACSTE_02366: Rubrerythrin	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3182: Rubrerythrin	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00484: Rubrerythrin	* Bacteroides vulgatus ATCC 8482 Site: position = -92 score = 6.36058 sequence = GTAATTGTAATAAATACAATTTT Gene: BVU_1137: Rubrerythrin	* Bacteroides coprophilus DSM 18228 Site: position = -93 score = 6.80585 sequence = AAAGTTGTAATGATTACAATTTT Gene: BACCOPRO_00127: Rubrerythrin	Rubrerythrin

CRON 3.
acn	* Bacteroides cellulosilyticus DSM 14838 Site: position = -47 score = 6.11365 sequence = TAATTTGTAATCTTTACAATATT Gene: BACCELL_00993: Aconitate hydratase (EC 4.2.1.3)	* Bacteroides dorei DSM 17855 Site: position = -25 score = 5.94674 sequence = AAAACTGTAATAATTATAAATTG Gene: BACDOR_03102: Aconitate hydratase (EC 4.2.1.3)	* Bacteroides eggerthii DSM 20697 Site: position = -48 score = 6.11365 sequence = TAATTTGTAATCTTTACAATATT Gene: BACEGG_00294: Aconitate hydratase (EC 4.2.1.3)	Bacteroides fragilis NCTC 9343 Gene: BF3543: Aconitate hydratase (EC 4.2.1.3)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03310: Aconitate hydratase (EC 4.2.1.3)	Bacteroides plebeius DSM 17135 Gene: BACPLE_01844: Aconitate hydratase (EC 4.2.1.3)	* Bacteroides stercoris ATCC 43183 Site: position = -45 score = 6.11365 sequence = TAATTTGTAATATTTACAATATT Gene: BACSTE_03162: Aconitate hydratase (EC 4.2.1.3)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2072: Aconitate hydratase (EC 4.2.1.3)	* Bacteroides uniformis ATCC 8492 Site: position = -45 score = 5.96443 sequence = TAATTTGTAATCTTTACAATAAT Gene: BACUNI_01674: Aconitate hydratase (EC 4.2.1.3)	* Bacteroides vulgatus ATCC 8482 Site: position = -19 score = 5.61328 sequence = AAAACTGTAATAATTATAAATGG Gene: BVU_1959: Aconitate hydratase (EC 4.2.1.3)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_00926: Aconitate hydratase (EC 4.2.1.3)	Aconitate hydratase (EC 4.2.1.3)
icd	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_00994: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides dorei DSM 17855 Gene: BACDOR_03101: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_00295: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides fragilis NCTC 9343 Gene: BF3542: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03311: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides plebeius DSM 17135 Gene: BACPLE_01845: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_03161: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2071: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_01673: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides vulgatus ATCC 8482 Gene: BVU_1960: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_00927: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
gltA	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_00995: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides dorei DSM 17855 Gene: BACDOR_03100: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_00296: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides fragilis NCTC 9343 Gene: BF3541: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03312: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides plebeius DSM 17135 Gene: BACPLE_01846: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_03160: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT_2070: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_01672: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides vulgatus ATCC 8482 Gene: BVU_1961: Citrate synthase (si) (EC 2.3.3.1)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_00928: Citrate synthase (si) (EC 2.3.3.1)	Citrate synthase (si) (EC 2.3.3.1)

CRON 4.
PF05140	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	* Bacteroides fragilis NCTC 9343 Site: position = -86 score = 6.20775 sequence = AAAATTGTATTTAATACAAATTA Gene: BF2364: ResB protein required for cytochrome c biosynthesis	Bacteroides ovatus ATCC 8483	* Bacteroides plebeius DSM 17135 Site: position = -79 score = 5.92314 sequence = AGATTTGTTATCTTTACAATTTT Gene: BACPLE_02893: ResB protein required for cytochrome c biosynthesis	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -94 score = 6.13119 sequence = CTACTTGTAACGATTACAATTTT Gene: BT1604: ResB protein required for cytochrome c biosynthesis	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	* Bacteroides coprophilus DSM 18228 Site: position = -79 score = 5.96296 sequence = ACAATTGTTATCTTTACAATTTT Gene: BACCOPRO_00708: ResB protein required for cytochrome c biosynthesis	ResB protein required for cytochrome c biosynthesis
ccsA	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343 Gene: BF2363: Cytochrome c biogenesis protein CcsA	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_02892: Cytochrome c biogenesis protein CcsA	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1605: Cytochrome c biogenesis protein CcsA	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_00709: Cytochrome c biogenesis protein CcsA	Cytochrome c biogenesis protein CcsA
ccp	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343 Gene: BF2362: Cytochrome c551 peroxidase (EC 1.11.1.5)	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_02891: Cytochrome c551 peroxidase (EC 1.11.1.5)	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1606: Cytochrome c551 peroxidase (EC 1.11.1.5)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_00817: Cytochrome c551 peroxidase (EC 1.11.1.5)	Cytochrome c551 peroxidase (EC 1.11.1.5)

CRON 5.
tpx	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_00326: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	* Bacteroides dorei DSM 17855 Site: position = -44 score = 5.69716 sequence = AAATTTGTTATCATTACAGTATC Gene: BACDOR_00877: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01719: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	Bacteroides fragilis NCTC 9343 Gene: BF2777: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_00596: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	2 Bacteroides plebeius DSM 17135 Gene: BACPLE_03375: Thiol peroxidase, Tpx-type (EC 1.11.1.15) Gene: BACPLE_02927: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00694: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1329: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	* Bacteroides uniformis ATCC 8492 Site: position = -35 score = 5.00187 sequence = TAATTTGTTATGTATACATATAA Gene: BACUNI_04341: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	* Bacteroides vulgatus ATCC 8482 Site: position = -44 score = 5.69716 sequence = AAATTTGTTATCATTACAGTATC Gene: BVU_3944: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	2 Bacteroides coprophilus DSM 18228* Site: position = -56 score = 6.28634 sequence = ATATTTGTAATTATTACATATCT Gene: BACCOPRO_01040: Thiol peroxidase, Tpx-type (EC 1.11.1.15) Gene: BACCOPRO_00401: Thiol peroxidase, Tpx-type (EC 1.11.1.15)	Thiol peroxidase, Tpx-type (EC 1.11.1.15)

CRON 6.
ahpC	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01721: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Bacteroides dorei DSM 17855 Site: position = -55 score = 5.99653 sequence = GCAAATGTAATAATTACAATTTA Gene: BACDOR_04898: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03370: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacteroides fragilis NCTC 9343 Gene: BF1210: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02068: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183 Gene: BACSTE_02431: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2812: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_01060: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Bacteroides vulgatus ATCC 8482 Site: position = -55 score = 5.99653 sequence = GCAAATGTAATAATTACAATTTA Gene: BVU_0847: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Bacteroides coprophilus DSM 18228 Site: position = -55 score = 6.08268 sequence = TGCATTGTAATAATTACAAATTT Gene: BACCOPRO_03297: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
ahpF	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01722: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides dorei DSM 17855 Gene: BACDOR_04897: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03369: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides fragilis NCTC 9343 Gene: BF1209: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02067: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183 Gene: BACSTE_02430: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2811: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_01061: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides vulgatus ATCC 8482 Gene: BVU_0846: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03296: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)

CRON 7.
PF01637	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	* Bacteroides fragilis NCTC 9343 Site: position = -36 score = 5.86804 sequence = ATATTTGCAATAATTATAAATAT Gene: BF3647: Archaeal ATPase family protein	* Bacteroides ovatus ATCC 8483 Site: position = -33 score = 5.6231 sequence = ATATTTGTAATAATTGTATTTAT Gene: BACOVA_02789: Archaeal ATPase family protein	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	Archaeal ATPase family protein

CRON 8.
ftn	* Bacteroides cellulosilyticus DSM 14838 Site: position = -40 score = 5.76683 sequence = ACTTTTGTAATGATTTCAAATTA Gene: BACCELL_00354: Ferritin	* Bacteroides dorei DSM 17855 Site: position = -41 score = 5.71924 sequence = ATATTTGCAACAGTTACAATTTA Gene: BACDOR_04357: Ferritin	* Bacteroides eggerthii DSM 20697 Site: position = -39 score = 6.29861 sequence = ATATTTGTAATCATTTCAATTTA Gene: BACEGG_01676: Ferritin	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	* Bacteroides stercoris ATCC 43183 Site: position = -39 score = 6.29861 sequence = ATATTTGTAATCATTTCAATTTA Gene: BACSTE_00720: Ferritin	Bacteroides thetaiotaomicron VPI-5482	* Bacteroides uniformis ATCC 8492 Site: position = -36 score = 5.80666 sequence = ACTTTTGTAATGATTTCAATTTA Gene: BACUNI_04391: Ferritin	* Bacteroides vulgatus ATCC 8482 Site: position = -40 score = 5.71924 sequence = ATATTTGCAACAGTTACAATTTA Gene: BVU_2754: Ferritin	Bacteroides coprophilus DSM 18228	Ferritin

CRON 9.
PF00576	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	* Bacteroides plebeius DSM 17135 Site: position = -50 score = 6.07459 sequence = ATATTTGTAATTGTTACAATCTT Gene: BACPLE_03494: Transthyretin family protein	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	Transthyretin family protein

CRON 10.
BT1211	* Bacteroides cellulosilyticus DSM 14838 Site: position = -29 score = 6.47936 sequence = ATATTTGTAATGATTATAAATTT Gene: BACCELL_04244: hypothetical protein	* Bacteroides dorei DSM 17855 Site: position = -34 score = 5.93932 sequence = TTCTTTGTAATTATTACAACTTT Gene: BACDOR_04415: hypothetical protein	* Bacteroides eggerthii DSM 20697 Site: position = -30 score = 6.20282 sequence = ATATTTGTAATGATTATAATTTG Gene: BACEGG_02389: hypothetical protein	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -35 score = 6.22455 sequence = ATATTTGTACTCATTACAAATTA Gene: BACOVA_03967: hypothetical protein	* Bacteroides plebeius DSM 17135 Site: position = -28 score = 5.49418 sequence = TACTTTGTAATCATTATAAAAAT Gene: BACPLE_02813: hypothetical protein	* Bacteroides stercoris ATCC 43183 Site: position = -29 score = 6.20282 sequence = ATATTTGTAATGATTATAATTTG Gene: BACSTE_00833: hypothetical protein	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -35 score = 6.1565 sequence = ATATTTGTACTCATTACAAATTC Gene: BT1211: hypothetical protein	* Bacteroides uniformis ATCC 8492 Site: position = 70 score = 6.51919 sequence = ATATTTGTAATCATTATAATTTT Gene: BACUNI_02171: hypothetical protein	Bacteroides vulgatus ATCC 8482	* Bacteroides coprophilus DSM 18228 Site: position = -28 score = 5.16072 sequence = TCCTTTGTAATTATTATAAAAAT Gene: BACCOPRO_00522: hypothetical protein	hypothetical protein
BACSTE_02669	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00832: hypothetical protein	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
cydA	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_04245: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides dorei DSM 17855 Gene: BACDOR_04414: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_02390: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides fragilis NCTC 9343 Gene: BF1937: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03968: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides plebeius DSM 17135 Gene: BACPLE_02811: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00831: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1210: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_02172: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	* Bacteroides vulgatus ATCC 8482 Site: position = -276 score = 5.93932 sequence = TTCTTTGTAATTATTACAACTTT Gene: BVU_2799: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_00524: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
cydB	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_04246: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides dorei DSM 17855 Gene: BACDOR_04413: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_02391: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides fragilis NCTC 9343 Gene: BF1938: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03969: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides plebeius DSM 17135 Gene: BACPLE_02810: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00830: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1209: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_02173: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides vulgatus ATCC 8482 Gene: BVU_2798: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_00525: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PerR - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --