Regulon of PerR in Bacteroides coprophilus DSM 18228
| Regulator type: | Transcription factor |
| TF locus tag: | BACCOPRO_01403 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Peroxide stress response; Oxidative stress response |
| Effector: | Hydrogen peroxide |
| Regulog: | PerR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - FUR
- By effector - Hydrogen peroxide
- By pathway - Peroxide stress response
- By pathway - Oxidative stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -28
Score: 5.2 Sequence: TCCTTTGTAATTATTATAAAAAT
Locus tag: BACCOPRO_00522
Name: BT1211 Funciton: hypothetical protein |
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BT1211
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hypothetical protein
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Position: -55
Score: 6.1 Sequence: TGCATTGTAATAATTACAAATTT
Locus tag: BACCOPRO_03297
Name: ahpC Funciton: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Locus tag: BACCOPRO_03296
Name: ahpF Funciton: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
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ahpC
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Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
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ahpF
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Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
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Position: -56
Score: 6.3 Sequence: ATATTTGTAATTATTACATATCT
Locus tag: BACCOPRO_01040
Name: tpx Funciton: Thiol peroxidase, Tpx-type (EC 1.11.1.15) |
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tpx
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Thiol peroxidase, Tpx-type (EC 1.11.1.15)
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Position: -79
Score: 6 Sequence: ACAATTGTTATCTTTACAATTTT
Locus tag: BACCOPRO_00708
Name: PF05140 Funciton: ResB protein required for cytochrome c biosynthesis
Locus tag: BACCOPRO_00709
Name: ccsA Funciton: Cytochrome c biogenesis protein CcsA |
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PF05140
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ResB protein required for cytochrome c biosynthesis
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ccsA
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Cytochrome c biogenesis protein CcsA
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Position: -93
Score: 6.8 Sequence: AAAGTTGTAATGATTACAATTTT
Locus tag: BACCOPRO_00127
Name: rbr2 Funciton: Rubrerythrin |
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rbr2
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Rubrerythrin
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Position: -33
Score: 6.1 Sequence: AAAATTGTAATAGTTACAGAATT
Locus tag: BACCOPRO_01403
Name: perR Funciton: Peroxide stress regulator PerR, Fur family
Locus tag: BACCOPRO_01402
Name: rbr Funciton: Rubrerythrin |
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perR
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Peroxide stress regulator PerR, Fur family
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rbr
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Rubrerythrin
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |