Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Edwardsiella ictaluri 93-146

Type Regulator Effector Pathway Genes Sites
TF AcrR Rhodamine 6G; Ethidium bromide; Proflavin Multidrug resistance 2 2
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 9 16
TF BirA Biotin Biotin biosynthesis 2 2
TF Crp Cyclic 3',5'-AMP Carbon catabolism 134 296
TF CueR Copper ion, (Cu+) Copper resistance 2 2
TF DeoR Deoxyribonucleoside utilization 1 1
TF ExuR Galacturonate Galacturonate utilization 5 11
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 4 4
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 3 3
TF Fnr Oxygen Energy metabolism; Anaerobic metabolism 51 80
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Central carbohydrate metabolism 15 17
TF Fur Iron ion, (Fe2+) Iron homeostasis 14 33
TF GalR/GalS Galactose Galactose utilization 3 5
TF GcvA Glycine Glycine metabolism 2 2
TF GlpR Glycerol 3-phosphate Glycerol utilization 3 3
TF GntR Gluconate Gluconate utilization 1 2
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 3
TF IclR Pyruvate; Glyoxylate Glyoxylate bypass 1 1
TF IlvY 2-Acetolactate Branched-chain amino acid biosynthesis 2 4
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 2 3
TF KdgR 2-keto-3-deoxygluconate Pectin and polygalacturonate utlization 7 7
TF LeuO Guanosine 3',5'-bis(diphosphate) 1 9
TF LexA DNA damage SOS response 14 17
TF LysR LL-2,6-Diaminopimelate Lysine biosynthesis 1 1
TF MetR Homocysteine Methionine biosynthesis 4 6
TF ModE Molybdate Molybdopterin biosynthesis; Molybdenum homeostasis 5 5
TF MprA 2,4-Dinitrophenol; Carbonyl cyanide m-chlorophenylhydrazone Multidrug resistance 2 2
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 6
TF NarP Nitrate; Nitrite Nitrate and nitrite respiration 9 10
TF NhaR Potassium ion Osmotic stress response 1 2
TF NikR Nickel ion, (Ni2+) Nickel homeostasis 2 2
TF NrdR Deoxyribonucleotides Ribonucleotide reductases 2 3
TF NsrR Nitric oxide Nitrosative stress response 3 4
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 6
TF PdhR Pyruvate Pyruvate metabolism 3 4
TF PurR Hypoxanthine; Guanine Purine metabolism 18 22
TF SiaR Glucosamine-6-phosphate Sialic acid utilization 2 2
TF TrpR Tryptophan Tryptophan biosynthesis 4 4
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 5 11
TF UlaR Ascorbate-6-phosphate Ascorbate utilization 2 2
TF UxuR Glucuronate Glucuronate utilization 5 9
TF ZntR Zinc ion, (Zn2+) Zinc resistance 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 3 3
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