Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PurR regulog to Edwardsiella ictaluri 93-146

Reference regulog properties
Source regulog: PurR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Purine metabolism
Effector: Hypoxanthine; Guanine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella ictaluri 93-146
Orthologous TF(s) NT01EI_2110
Regulated genes 18
Built upon 313 sites [see more]
Predicted regulatory interactions in Edwardsiella ictaluri 93-146
Locus tag Position Score Sequence
Position: -127
Score: 3.8
Sequence: GCGTTAACGATTGCGT
Locus tag: NT01EI_0023
NT01EI_0023 -127 3.8 GCGTTAACGATTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhQ
Ortholog function: conserved inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b3471 -159 3.7 AGGTTAACGATTGCGT
Salmonella typhimurium LT2 STM3579 -108 3.7 AGGTTAACGATTGCGT
Citrobacter koseri ATCC BAA-895 CKO_04901 -109 3.8 AAGTTAACGATTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03837 -147 3.8 AGGTTAACGTTTGCGC
-93 3.7 ATGCAGCCGTTTTTAA
Enterobacter sp. 638 Ent638_3878 -160 3.7 AGGTTAACGATTGCGT
Erwinia amylovora ATCC 49946 EAM_3301 -164 3.8 GTCCAAAAGATTTCGC
Yersinia pestis KIM y0408 -90 3.8 GCGCAAACGCGTATTA
Serratia proteamaculans 568 Spro_0204 -257 4 GCGTTAACGTTTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4354 -150 4.1 ACGACAACGTTTGCGC
Edwardsiella tarda EIB202 ETAE_0019 -127 3.8 GCGTTAACGATTGCGT
Proteus mirabilis HI4320 PMI3596 -53 3.8 AATCATACGTTTTATT
Position: -36
Score: 5.1
Sequence: GAGCAAACGTTTGCTT
Locus tag: NT01EI_0028
NT01EI_0028 -36 5.1 GAGCAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xanP
Ortholog function: xanthine/uracil permease, NCS2 family
Escherichia coli str. K-12 substr. MG1655 b3654 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Salmonella typhimurium LT2 STM3747 -68 4.9 TCGCAATCGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Citrobacter koseri ATCC BAA-895 CKO_05111 -53 5.1 ATGCAATCGTTTGCTT
45 4.9 GCGCAACCGGTTGCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04013 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Enterobacter sp. 638 Ent638_0073 -68 4.9 TCGCAACCGTTTGCTT
30 4.8 GCGCAACCGATTGCGC
Erwinia amylovora ATCC 49946 EAM_0040 -69 4.6 TAGCAAACGATTGCTT
Yersinia pestis KIM y0107 -18 5.1 GCGCAAACGATTGCTT
Serratia proteamaculans 568 Spro_4873 -70 5.1 GCGCAACCGTTTGCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0035 -74 4.9 TAGCAAACGTTTGCTT
Edwardsiella tarda EIB202 ETAE_0025 -70 5.3 ACGCAAACGATTGCTT
Proteus mirabilis HI4320 PMI2868 -68 5.3 ACGCAAACGATTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0247 -68 5.3 ACGCAAACGATTGCTT
Position: -118
Score: 6
Sequence: ACGCAAACGTTTTCGT
Locus tag: NT01EI_0186
NT01EI_0186 -118 6 ACGCAAACGTTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purH
Ortholog function: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
Escherichia coli str. K-12 substr. MG1655 b4006 -123 5.8 GCGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM4176 -123 5.8 GCGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_02983 -123 5.8 GCGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04388 -126 5.8 GCGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_0216 -60 5.8 GCGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_0249 -144 5.7 GCGCAAACGTTTTCGC
Yersinia pestis KIM y0502 -111 5.7 ACGCAATCGTTTTCGC
Serratia proteamaculans 568 Spro_0293 -179 5.9 ACGCAAACGTTTTCGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0241 -159 5.9 ACGCAAACGTTTTCGC
Edwardsiella tarda EIB202 ETAE_0186 -116 6 ACGCAAACGTTTTCGT
Proteus mirabilis HI4320 PMI2768 -155 5.6 ACGCAAACGTTTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu0495 -283 6 ACGCAAACGTTTTCGT
Position: -81
Score: 4.4
Sequence: GCGCAATCGTGTGCGA
Locus tag: NT01EI_0415
NT01EI_0415 -81 4.4 GCGCAATCGTGTGCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: purA
Ortholog function: adenylosuccinate synthetase
Escherichia coli str. K-12 substr. MG1655 b4177 -22 4.8 AAGCAAACGGTGATTT
Salmonella typhimurium LT2 STM4366 -22 4.8 AAGCAAACGGTGATTT
Citrobacter koseri ATCC BAA-895 CKO_03657 -22 4.8 AAGCAAACGGTGATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04576 -22 4.8 AAGCAAACGGTGATTT
Enterobacter sp. 638 Ent638_0360 -21 4.6 AAGCAATCGGTGATTT
Erwinia amylovora ATCC 49946 EAM_0441 -80 4.2 GCGCAATCGTATGCTA
-21 4.6 AAGCAATCGGTGATTT
Serratia proteamaculans 568 Spro_0436 -21 4.6 AAGCAACCGGTGATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3929 -81 4.2 GCGCAACCGTGTGCTA
Edwardsiella tarda EIB202 ETAE_0358 -81 4.4 GCGCAATCGTGTGCGA
Position: -116
Score: 5.9
Sequence: ACGCAAACGGTTTCGT
Locus tag: NT01EI_0886
NT01EI_0886 -116 5.9 ACGCAAACGGTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purL
Ortholog function: phosphoribosylformylglycinamidine synthase
Escherichia coli str. K-12 substr. MG1655 b2557 -92 5.9 ACGCAAACGGTTTCGT
Salmonella typhimurium LT2 STM2565 -90 5.9 ACGCAAACGGTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_00226 29 5.9 ACGCAAACGGTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02882 -91 5.9 ACGCAAACGGTTTCGT
Enterobacter sp. 638 Ent638_3042 -101 5.9 ACGCAAACGGTTTCGT
Erwinia amylovora ATCC 49946 EAM_2502 -104 5.6 GCGCAAACGGTTTCGT
Yersinia pestis KIM y1309 -130 5.9 ACGCAAACGGTTTCGT
Serratia proteamaculans 568 Spro_3654 -113 5.9 ACGCAAACGGTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3258 -113 5.9 ACGCAAACGGTTTCGT
Edwardsiella tarda EIB202 ETAE_0774 -116 5.9 ACGCAAACGGTTTCGT
Proteus mirabilis HI4320 PMI1875 -98 5.9 ACGCAAACGGTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3317 -91 5.9 ACGCAAACGGTTTCGT
Position: -117
Score: 4.9
Sequence: TAGCAAACGTTTGCTT
Locus tag: NT01EI_1191
NT01EI_1191 -117 4.9 TAGCAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purM
Ortholog function: phosphoribosylformylglycinamidine cyclo-ligase
Escherichia coli str. K-12 substr. MG1655 b2499 -79 5.1 TCGCAAACGTTTGCTT
Salmonella typhimurium LT2 STM2499.S -63 5.1 TCGCAAACGTTTGCTT
Citrobacter koseri ATCC BAA-895 CKO_00291 -299 5.1 TCGCAAACGTTTGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02824 -74 5.1 TCGCAAACGTTTGCTT
Enterobacter sp. 638 Ent638_2988 -79 4.9 TCGCAAACGTTTGCCT
Erwinia amylovora ATCC 49946 EAM_2441 -84 5.1 TCGCAAACGTTTGCTT
Yersinia pestis KIM y1407 -242 4.9 TCGCAAACGTTTGCCT
Serratia proteamaculans 568 Spro_3524 -59 4.9 TCGCAAACGTTTGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1254 -129 4.6 TCGCAAACGATTGCCT
Edwardsiella tarda EIB202 ETAE_1086 -116 4.9 TAGCAAACGTTTGCTT
Proteus mirabilis HI4320 PMI1575 -79 5.1 TCGCAAACGTTTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2760 -80 5.1 TCGCAAACGTTTGCTT
Position: -93
Score: 4.4
Sequence: ACGCAACCGTTTGGCT
Locus tag: NT01EI_1202
NT01EI_1202 -93 4.4 ACGCAACCGTTTGGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purC
Ortholog function: phosphoribosylaminoimidazole-succinocarboxamidesynthase
Escherichia coli str. K-12 substr. MG1655 b2476 -169 5 ACGCAAACGTGTGCGT
Salmonella typhimurium LT2 STM2487 -131 5 ACGCAAACGTGTGCGT
Citrobacter koseri ATCC BAA-895 CKO_00311 -145 5 ACGCAAACGTGTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02810 -187 5 ACGCAAACGTGTGCGT
Enterobacter sp. 638 Ent638_2972 -68 5 ACGCAAACGTGTGCGT
Erwinia amylovora ATCC 49946 EAM_2430 -151 4.6 ACGTAAACGATTGCTT
Serratia proteamaculans 568 Spro_3507 -88 4.1 ACGGTATCGTTTGCGT
Edwardsiella tarda EIB202 ETAE_1098 -97 4.5 ACGCAATCGTTTGGCT
Position: -62
Score: 5.9
Sequence: ACGCAAACGGTTTCGT
Locus tag: NT01EI_1862
NT01EI_1862 -62 5.9 ACGCAAACGGTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purT
Ortholog function: phosphoribosylglycinamide formyltransferase 2
Escherichia coli str. K-12 substr. MG1655 b1849 -53 6 ACGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM1883 -51 6 ACGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_01117 -52 6 ACGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02364 -56 6 ACGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_2418 -49 6 ACGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_1994 -58 6 ACGCAAACGTTTTCGT
Yersinia pestis KIM y2533 -85 5.9 ACGCAATCGTTTTCGT
Serratia proteamaculans 568 Spro_2805 -74 6 ACGCAAACGTTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2477 -59 6 ACGCAAACGTTTTCGT
Edwardsiella tarda EIB202 ETAE_1838 -107 5.9 ACGCAAACGGTTTCGT
Proteus mirabilis HI4320 PMI2187 -50 5.4 ATGCAAACGTTTGCGT
Position: -57
Score: 4.3
Sequence: AGGCAAACGATTAACA
Locus tag: NT01EI_2110
NT01EI_2110 -57 4.3 AGGCAAACGATTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: purR
Ortholog function: purine nucleotide synthesis repressor
Escherichia coli str. K-12 substr. MG1655 b1658 -60 5.4 AGGCAAACGTTTACCT
28 4.4 GAGCAAACGTTTCCAC
Salmonella typhimurium LT2 STM1430 -58 5.4 AGGCAAACGTTTACCT
28 4.3 GGGCAAACGTTTCCAC
Citrobacter koseri ATCC BAA-895 CKO_01672 -60 5.6 AGGCAAACGTTTACTT
28 4.4 GAGCAAACGTTTCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01996 -59 5.7 AGGCAAACGTTTACGT
28 4.6 GCGCAAACGTTTCCAC
Enterobacter sp. 638 Ent638_1789 -60 5.4 AGGCAAACGTTTACCT
28 4.6 GCGCAAACGTTTCCAC
Erwinia amylovora ATCC 49946 EAM_1663 -62 4.3 AGGCAAACGATTAACA
Yersinia pestis KIM y1950 -62 4.3 AGGCAAACGATTAACA
Serratia proteamaculans 568 Spro_2195 -62 4.3 AGGCAAACGATTAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1925 -60 4.3 AGGCAAACGATTAACA
Edwardsiella tarda EIB202 ETAE_1674 -57 4.3 AGGCAAACGATTAACA
Position: 21
Score: 4.1
Sequence: GGGAAAACGATTGCGC
Locus tag: NT01EI_3003
NT01EI_3003 21 4.1 GGGAAAACGATTGCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: folD
Ortholog function: 5,10-methylene-tetrahydrofolate dehydrogenase
Salmonella typhimurium LT2 STM0542 -89 4.3 ACACAAACGTTAACTG
Citrobacter koseri ATCC BAA-895 CKO_02629 -89 4.6 ACGCAAACGATAACTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00484 -88 3.7 CAGCAAACGAGGACTG
Yersinia pestis KIM y1110 -155 3.8 GGGCAGTCGCTTTCGA
Proteus mirabilis HI4320 PMI2155 21 4.1 GGGAAAACGATTGCGC
Photorhabdus luminescens subsp. laumondii TTO1 plu4317 21 4.1 GGGAAAACGATTGCGC
Position: -114
Score: 5.7
Sequence: ACGCAAACGTTTTCCT
Locus tag: NT01EI_3011
NT01EI_3011 -114 5.7 ACGCAAACGTTTTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: phosphoribosylaminoimidazole carboxylase catalytic subunit
Escherichia coli str. K-12 substr. MG1655 b0523 -87 5.5 ACGCAACCGTTTTCCT
Salmonella typhimurium LT2 STM0534 -87 5.5 ACGCAACCGTTTTCCT
Citrobacter koseri ATCC BAA-895 CKO_02635 -87 5.5 ACGCAACCGTTTTCCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00478 -88 5.5 ACGCAACCGTTTTCCT
Enterobacter sp. 638 Ent638_0977 -86 5.5 ACGCAACCGTTTTCCT
Erwinia amylovora ATCC 49946 EAM_1060 -111 5.5 ACGCAACCGTTTTCCT
Yersinia pestis KIM y1103 -116 5.5 ACGCAACCGTTTTCCT
Serratia proteamaculans 568 Spro_1163 -108 5.5 ACGCAACCGTTTTCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3156 -130 5.5 ACGCAACCGTTTTCCT
Edwardsiella tarda EIB202 ETAE_2700 -114 5.7 ACGCAAACGTTTTCCT
Proteus mirabilis HI4320 PMI2161 -91 5.7 ACGCAAACGTTTTCCT
Photorhabdus luminescens subsp. laumondii TTO1 plu3807 -99 5.5 ACGCAATCGTTTTCCT
Position: -79
Score: 5
Sequence: AGGCAACCGATTTCGG
Locus tag: NT01EI_3154
NT01EI_3154 -79 5 AGGCAACCGATTTCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: guaB
Ortholog function: inosine-5'-monophosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2508 -69 5.2 ATGCAATCGGTTACGC
Salmonella typhimurium LT2 STM2511 -68 5.3 ATGCAACCGATTACGT
Citrobacter koseri ATCC BAA-895 CKO_00279 -69 5.3 ATGCAATCGGTTTCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02834 -66 5.2 ATGCAATCGGTTACGC
Enterobacter sp. 638 Ent638_2999 -67 5.2 ATGCAATCGGTTACGC
Erwinia amylovora ATCC 49946 EAM_2465 -78 4.9 AGGCAATCGATTACGG
Yersinia pestis KIM y1362 6 5.2 AGGCAATCGATTACGC
Serratia proteamaculans 568 Spro_3596 -78 5.1 AGGCAACCGATTACGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3209 -79 5.2 AGGCAATCGATTACGC
Edwardsiella tarda EIB202 ETAE_2787 -79 5 AGGCAACCGGTTTCGG
Proteus mirabilis HI4320 PMI1546 -77 4.9 AAGCAACCGATTACGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2713 -80 5.3 AGGCAACCGATTACGT
Position: -184
Score: 5.4
Sequence: ACGCAATCGATTACGC
Locus tag: NT01EI_3348
NT01EI_3348 -184 5.4 ACGCAATCGATTACGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tsx
Ortholog function: nucleoside-specific channel-forming protein
Escherichia coli str. K-12 substr. MG1655 b0411 -154 5.6 ACGCAATCGATTACGT
Salmonella typhimurium LT2 STM0413 -166 4.4 GCGCAAACGTGAACGC
-154 5.6 ACGCAATCGATTACGT
Citrobacter koseri ATCC BAA-895 CKO_02750 -168 4.6 ACGCAAACGTGAACGC
-156 5.6 ACGCAATCGATTACGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00363 -156 5.4 ACGCAATCGATTACGC
Enterobacter sp. 638 Ent638_0879 -161 4.6 ACGCAAACGTGAACGC
-149 5.6 ACGCAATCGATTACGT
Erwinia amylovora ATCC 49946 EAM_2589 -290 5.1 AGGCAATCGTTTACCC
Serratia proteamaculans 568 Spro_2072 -181 5.2 ACGCAATCGATTACCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3796 -129 5.6 AGGCAACCGTTTTCGT
Edwardsiella tarda EIB202 ETAE_2935 -184 5.4 ACGCAATCGATTACGC
Position: -129
Score: 4.9
Sequence: ACGTAATCGATTACGT
Locus tag: NT01EI_3518
NT01EI_3518 -129 4.9 ACGTAATCGATTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcD
Ortholog function: putative xanthine/uracil permease
Edwardsiella tarda EIB202 ETAE_3163 -144 4.9 ACGTAATCGATTACGT
Position: -83
Score: 4.6
Sequence: AAGAAAACGTTTGCTT
Locus tag: NT01EI_3616
NT01EI_3616 -83 4.6 AAGAAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: codB
Ortholog function: cytosine permease
Escherichia coli str. K-12 substr. MG1655 b0336 -82 4.6 ACGAAAACGATTGCTT
Salmonella typhimurium LT2 STM3333 -74 4.8 ACGAAAACGTTTGCTT
Edwardsiella tarda EIB202 ETAE_3253 -83 4.6 AAGAAAACGTTTGCTT
Proteus mirabilis HI4320 PMI1458 -80 4.4 ACGAAAACGTTTGCAT
Position: -224
Score: 3.8
Sequence: ATATAAGCGTTTGCGT
Locus tag: NT01EI_3926
NT01EI_3926 -224 3.8 ATATAAGCGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purP
Ortholog function: high affinity adenine permease
Escherichia coli str. K-12 substr. MG1655 b3714 -147 3.7 AGTTTAACGTTTTCGT
-115 4.9 ACGCAATCGTTGCCGT
Salmonella typhimurium LT2 STM3851.S -118 4.9 ACGCAATCGTTGCCGT
Citrobacter koseri ATCC BAA-895 CKO_00059 -148 3.7 AGTTTAACGTTTTCGT
-116 4.9 ACGCAATCGTTGCCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04124 -151 3.7 AGTTTAACGTTTTCGT
-119 4.9 ACGCAATCGTTGCCGT
Enterobacter sp. 638 Ent638_4143 -115 4.9 ACGCAATCGTTGCCGT
Erwinia amylovora ATCC 49946 EAM_3460 -99 4.8 GCGCAATCGGTTGCGA
Serratia proteamaculans 568 Spro_0021 87 4 ACGGAAACGATTGCCG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4464 162 4 ACGGAAACGATTGCCG
Edwardsiella tarda EIB202 ETAE_3545 -132 3.8 ATATAAGCGTTTGCGT
Proteus mirabilis HI4320 PMI2915 -92 5.5 ACGCAATCGATTACTT
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