Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LeuO regulog to Edwardsiella ictaluri 93-146

Reference regulog properties
Source regulog: LeuO - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process:
Effector: Guanosine 3',5'-bis(diphosphate)
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Edwardsiella ictaluri 93-146
Orthologous TF(s) NT01EI_0721
Regulated genes 1
Built upon 21 sites [see more]
Predicted regulatory interactions in Edwardsiella ictaluri 93-146
Locus tag Position Score Sequence
Position: -337
Score: 4.2
Sequence: ATTAATATTATCTAT
Position: -259
Score: 3.9
Sequence: ATTGGCTTATATTAT
Position: -249
Score: 3.6
Sequence: ATTATTATTTTTAAA
Position: -246
Score: 3.9
Sequence: ATTATTTTTAAATAT
Position: -193
Score: 3.5
Sequence: ATTAATCTGTAAAAT
Position: -162
Score: 3.6
Sequence: ATTGTGCCTATTTCT
Position: -121
Score: 3.7
Sequence: ATTTATATAATGAAT
Position: -108
Score: 3.8
Sequence: ATTTTTGTTTTTGAT
Position: -105
Score: 3.7
Sequence: TTTGTTTTTGATAAT
Locus tag: NT01EI_0721
NT01EI_0721 -337 4.2 ATTAATATTATCTAT
-259 3.9 ATTGGCTTATATTAT
-249 3.6 ATTATTATTTTTAAA
-246 3.9 ATTATTTTTAAATAT
-193 3.5 ATTAATCTGTAAAAT
-162 3.6 ATTGTGCCTATTTCT
-121 3.7 ATTTATATAATGAAT
-108 3.8 ATTTTTGTTTTTGAT
-105 3.7 TTTGTTTTTGATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuO
Ortholog function: Dual transcriptional regulator LeuO, LysR family
Citrobacter koseri ATCC BAA-895 CKO_03302 -241 3.5 ATTCGCCACGCTTAT
Edwardsiella tarda EIB202 ETAE_0623 -246 4.7 ATTGCCCTTAATTAT
Enterobacter sp. 638 Ent638_0623 -229 4.6 ATTCATTGGATTTAT
Escherichia coli str. K-12 substr. MG1655 b0076 -325 4.1 ATTAATGTTAAGAAT
-243 4.9 ATTCGCGGTAGTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00081 -291 4.2 ATTTTTATGGATTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3672 -223 4.2 ATTGGAATTATATAT
-112 4.7 ATTGATCTCGTTAAT
Proteus mirabilis HI4320 PMI2082 -289 3.8 ATTTTGTTTTATTAT
Salmonella typhimurium LT2 STM0115 -263 3.9 ATTCACTTGGTGTAT
-240 4.4 ATTCGCCATAGTTAT
Serratia proteamaculans 568 Spro_0746 -400 3.6 ATTCTTGATATCAAT
Yersinia pestis KIM y3642 -413 4.2 ATTATTGGTGATTAT
-210 5 ATTGGCGTTATTAAT